RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 H3BPC8 53 aa12.65□□□□□ -0.38
CCDC38-201ENST00000344280 PKD1P98161 4303 aa12.61□□□□□ -0.39
CCDC38-201ENST00000344280 LRP1BQ9NZR2 4599 aa12.61□□□□□ -0.39
CCDC38-201ENST00000344280 Q1T7F1 81 aa12.6□□□□□ -0.39
CCDC38-201ENST00000344280 FAT2Q9NYQ8 4349 aa12.59□□□□□ -0.39
CCDC38-201ENST00000344280 CDK2AP2O75956 126 aa12.59□□□□□ -0.39
CCDC38-201ENST00000344280 SEC61GP60059 68 aa12.59□□□□□ -0.39
CCDC38-201ENST00000344280 SPINK6Q6UWN8 80 aa12.59□□□□□ -0.39
CCDC38-201ENST00000344280 NDUFS5O43920 106 aa12.57□□□□□ -0.4
CCDC38-201ENST00000344280 SPANXA2-OT1Q8N9U9 137 aa12.57□□□□□ -0.4
CCDC38-201ENST00000344280 TP53AIP1Q9HCN2 124 aa12.55□□□□□ -0.4
CCDC38-201ENST00000344280 KRTAP10-1P60331 282 aa12.54□□□□□ -0.4
CCDC38-201ENST00000344280 KRTAP21-3Q3LHN1 58 aa12.54□□□□□ -0.4
CCDC38-201ENST00000344280 MRPL34Q9BQ48 92 aaKnown RBP12.54□□□□□ -0.4
CCDC38-201ENST00000344280 PCOTHQ58A44 107 aa12.51□□□□□ -0.41
CCDC38-201ENST00000344280 Q6ZSA8 131 aa12.49□□□□□ -0.41
CCDC38-201ENST00000344280 CD164Q04900 197 aa12.48□□□□□ -0.41
CCDC38-201ENST00000344280 VPS13BQ7Z7G8 4022 aa12.47□□□□□ -0.41
CCDC38-201ENST00000344280 SSBP3-AS1Q7Z2R9 100 aa12.46□□□□□ -0.41
CCDC38-201ENST00000344280 KRTAP13-2Q52LG2 175 aa12.45□□□□□ -0.42
CCDC38-201ENST00000344280 PMAIP1Q13794 54 aa12.45□□□□□ -0.42
CCDC38-201ENST00000344280 IGLV7-46A0A075B6I9 117 aa12.44□□□□□ -0.42
CCDC38-201ENST00000344280 PSPHP1O15172 72 aa12.42□□□□□ -0.42
CCDC38-201ENST00000344280 Q5W150 140 aa12.41□□□□□ -0.42
CCDC38-201ENST00000344280 COA5Q86WW8 74 aa12.36□□□□□ -0.43
CCDC38-201ENST00000344280 PKHD1P08F94 4074 aa12.35□□□□□ -0.43
CCDC38-201ENST00000344280 KRTAP13-3Q3SY46 172 aa12.34□□□□□ -0.43
CCDC38-201ENST00000344280 KRTAP1-4P0C5Y4 121 aa12.34□□□□□ -0.43
CCDC38-201ENST00000344280 Q8N9P0 234 aaPredicted RBP12.33□□□□□ -0.44
CCDC38-201ENST00000344280 A8MUN3 132 aa12.32□□□□□ -0.44
CCDC38-201ENST00000344280 C8orf87E5RJ46 101 aa12.27□□□□□ -0.44
CCDC38-201ENST00000344280 LINC00313P59037 77 aa12.26□□□□□ -0.45
CCDC38-201ENST00000344280 LOC101927531A0A1B0GV80 90 aa12.25□□□□□ -0.45
CCDC38-201ENST00000344280 SACSQ9NZJ4 4579 aa12.25□□□□□ -0.45
CCDC38-201ENST00000344280 Q5VV11 94 aa12.23□□□□□ -0.45
CCDC38-201ENST00000344280 RETNLBQ9BQ08 111 aa12.22□□□□□ -0.45
CCDC38-201ENST00000344280 HRES1P13985 223 aa12.21□□□□□ -0.45
CCDC38-201ENST00000344280 LIMD2Q9BT23 127 aa12.2□□□□□ -0.46
CCDC38-201ENST00000344280 PLA2G1BP04054 148 aaKnown RBP12.19□□□□□ -0.46
CCDC38-201ENST00000344280 PRR15LQ9BU68 103 aa12.16□□□□□ -0.46
CCDC38-201ENST00000344280 KRTAP16-1A8MUX0 517 aa12.16□□□□□ -0.46
CCDC38-201ENST00000344280 A8MU10 97 aa12.12□□□□□ -0.47
CCDC38-201ENST00000344280 SPAG11AQ6PDA7 123 aa12.12□□□□□ -0.47
CCDC38-201ENST00000344280 TYMSOSQ8TAI1 123 aa12.12□□□□□ -0.47
CCDC38-201ENST00000344280 DYNC1H1Q14204 4646 aaKnown RBP12.11□□□□□ -0.47
CCDC38-201ENST00000344280 FAM229AH3BQW9 127 aa12.11□□□□□ -0.47
CCDC38-201ENST00000344280 CHKB-CPT1BH3BT56 60 aa12.08□□□□□ -0.48
CCDC38-201ENST00000344280 C4orf48Q5BLP8 95 aa12.07□□□□□ -0.48
CCDC38-201ENST00000344280 SMR3BP02814 79 aaPredicted RBP12.04□□□□□ -0.48
CCDC38-201ENST00000344280 KTN1-AS1Q86SY8 53 aa12.04□□□□□ -0.48
CCDC38-201ENST00000344280 PRR26Q8N8Z3 221 aa12.04□□□□□ -0.48
CCDC38-201ENST00000344280 ATP11AUNQ6ZP68 121 aa12.04□□□□□ -0.48
CCDC38-201ENST00000344280 FAT1Q14517 4588 aa12.03□□□□□ -0.48
CCDC38-201ENST00000344280 IGKV2-30P06310 120 aa12.03□□□□□ -0.48
CCDC38-201ENST00000344280 Q75L30 129 aa12.03□□□□□ -0.48
CCDC38-201ENST00000344280 SPINK1P00995 79 aa12.02□□□□□ -0.49
CCDC38-201ENST00000344280 LINC01558Q9Y6Z2 57 aa12.01□□□□□ -0.49
CCDC38-201ENST00000344280 DMAC1Q96GE9 116 aa11.97□□□□□ -0.49
CCDC38-201ENST00000344280 ACYP2P14621 99 aa11.97□□□□□ -0.49
CCDC38-201ENST00000344280 APOBP04114 4563 aaKnown RBP11.95□□□□□ -0.5
CCDC38-201ENST00000344280 LINC00304Q8N9R0 145 aa11.95□□□□□ -0.5
CCDC38-201ENST00000344280 IGKV2D-30A0A075B6S6 120 aa11.94□□□□□ -0.5
CCDC38-201ENST00000344280 LCA10Q71F78 164 aa11.93□□□□□ -0.5
CCDC38-201ENST00000344280 A6NED7 52 aa11.91□□□□□ -0.5
CCDC38-201ENST00000344280 A0A1B0GVY2 172 aa11.91□□□□□ -0.5
CCDC38-201ENST00000344280 CDC42SE1Q9NRR8 79 aa11.9□□□□□ -0.5
CCDC38-201ENST00000344280 A6NN06 94 aa11.89□□□□□ -0.51
CCDC38-201ENST00000344280 SPTSSBQ8NFR3 76 aa11.87□□□□□ -0.51
CCDC38-201ENST00000344280 RBM12B-AS1Q9P1G2 102 aa11.87□□□□□ -0.51
CCDC38-201ENST00000344280 KRTAP10-4P60372 401 aaPredicted RBP11.86□□□□□ -0.51
CCDC38-201ENST00000344280 PKHD1L1Q86WI1 4243 aa11.85□□□□□ -0.51
CCDC38-201ENST00000344280 RYR2Q92736 4967 aa11.85□□□□□ -0.51
CCDC38-201ENST00000344280 KMT2CQ8NEZ4 4911 aaKnown RBP11.84□□□□□ -0.51
CCDC38-201ENST00000344280 SPINK7P58062 85 aa11.84□□□□□ -0.51
CCDC38-201ENST00000344280 RPS29P62273 56 aaKnown RBP11.83□□□□□ -0.52
CCDC38-201ENST00000344280 C7orf65Q6ZTY9 151 aa11.75□□□□□ -0.53
CCDC38-201ENST00000344280 C9orf92A6NGG3 77 aa11.75□□□□□ -0.53
CCDC38-201ENST00000344280 Q8N1X5 172 aa11.67□□□□□ -0.54
CCDC38-201ENST00000344280 A0A1B0GU69 56 aa11.62□□□□□ -0.55
CCDC38-201ENST00000344280 A8MUU9 505 aa11.61□□□□□ -0.55
CCDC38-201ENST00000344280 C20orf166-AS1Q96NR2 134 aa11.61□□□□□ -0.55
CCDC38-201ENST00000344280 LRP1Q07954 4544 aaKnown RBP11.61□□□□□ -0.55
CCDC38-201ENST00000344280 FLG2Q5D862 2391 aaPredicted RBP11.6□□□□□ -0.55
CCDC38-201ENST00000344280 TNXBP22105 4242 aa11.52□□□□□ -0.57
CCDC38-201ENST00000344280 FAT3Q8TDW7 4589 aa11.48□□□□□ -0.57
CCDC38-201ENST00000344280 HSPG2P98160 4391 aa11.48□□□□□ -0.57
CCDC38-201ENST00000344280 KRTAP3-1Q9BYR8 98 aa11.46□□□□□ -0.57
CCDC38-201ENST00000344280 RYR3Q15413 4870 aa11.44□□□□□ -0.58
CCDC38-201ENST00000344280 SPATA8Q6RVD6 105 aa11.39□□□□□ -0.59
CCDC38-201ENST00000344280 UQCR11O14957 56 aa11.37□□□□□ -0.59
CCDC38-201ENST00000344280 Q5VSD8 79 aa11.37□□□□□ -0.59
CCDC38-201ENST00000344280 KRTAP10-8P60410 259 aa11.35□□□□□ -0.59
CCDC38-201ENST00000344280 DMBT1Q9UGM3 2413 aaPredicted RBP11.35□□□□□ -0.59
CCDC38-201ENST00000344280 MIR22HGQ0VDD5 57 aa11.35□□□□□ -0.59
CCDC38-201ENST00000344280 MYCBP2O75592 4640 aa11.33□□□□□ -0.6
CCDC38-201ENST00000344280 KRTAP17-1Q9BYP8 105 aa11.33□□□□□ -0.6
CCDC38-201ENST00000344280 RYR1P21817 5038 aa11.32□□□□□ -0.6
CCDC38-201ENST00000344280 KIAA1109Q2LD37 5005 aa11.23□□□□□ -0.61
CCDC38-201ENST00000344280 LINC01554Q52M75 96 aa11.23□□□□□ -0.61
CCDC38-201ENST00000344280 PRAC1Q96KF2 57 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms