RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 ZNF861PO60384 105 aa14.29□□□□□ -0.12
NELFB-201ENST00000343053 Q5VV11 94 aa14.29□□□□□ -0.12
NELFB-201ENST00000343053 Q8N9P0 234 aaPredicted RBP14.29□□□□□ -0.12
NELFB-201ENST00000343053 ASB16-AS1Q495Z4 193 aa14.28□□□□□ -0.12
NELFB-201ENST00000343053 PRR15LQ9BU68 103 aa14.27□□□□□ -0.12
NELFB-201ENST00000343053 IGLV7-46A0A075B6I9 117 aa14.25□□□□□ -0.13
NELFB-201ENST00000343053 CIRBP-AS1Q8TBR5 109 aa14.24□□□□□ -0.13
NELFB-201ENST00000343053 PLAC8Q9NZF1 115 aa14.24□□□□□ -0.13
NELFB-201ENST00000343053 TP53AIP1Q9HCN2 124 aa14.23□□□□□ -0.13
NELFB-201ENST00000343053 MRPL34Q9BQ48 92 aaKnown RBP14.23□□□□□ -0.13
NELFB-201ENST00000343053 CHKB-CPT1BH3BT56 60 aa14.22□□□□□ -0.13
NELFB-201ENST00000343053 Q6ZR54 194 aa14.19□□□□□ -0.14
NELFB-201ENST00000343053 ALMS1Q8TCU4 4167 aa14.18□□□□□ -0.14
NELFB-201ENST00000343053 DNAH11Q96DT5 4516 aa14.16□□□□□ -0.14
NELFB-201ENST00000343053 SPAG11AQ6PDA7 123 aa14.14□□□□□ -0.15
NELFB-201ENST00000343053 DNHD1Q96M86 4753 aa14.13□□□□□ -0.15
NELFB-201ENST00000343053 IGLV7-43P04211 117 aa14.13□□□□□ -0.15
NELFB-201ENST00000343053 Q5W150 140 aa14.13□□□□□ -0.15
NELFB-201ENST00000343053 LIMD2Q9BT23 127 aa14.13□□□□□ -0.15
NELFB-201ENST00000343053 C1orf134Q5TEV5 83 aa14.11□□□□□ -0.15
NELFB-201ENST00000343053 LY6G6CO95867 125 aa14.11□□□□□ -0.15
NELFB-201ENST00000343053 DNAH5Q8TE73 4624 aa14.1□□□□□ -0.15
NELFB-201ENST00000343053 HRES1P13985 223 aa14.07□□□□□ -0.16
NELFB-201ENST00000343053 RETNLBQ9BQ08 111 aa14.06□□□□□ -0.16
NELFB-201ENST00000343053 A6NED7 52 aa14.03□□□□□ -0.16
NELFB-201ENST00000343053 SPTSSBQ8NFR3 76 aa14.03□□□□□ -0.16
NELFB-201ENST00000343053 KRTAP10-2P60368 255 aa14.03□□□□□ -0.16
NELFB-201ENST00000343053 LCA10Q71F78 164 aa13.98□□□□□ -0.17
NELFB-201ENST00000343053 LRP1BQ9NZR2 4599 aa13.97□□□□□ -0.17
NELFB-201ENST00000343053 Q75L30 129 aa13.95□□□□□ -0.18
NELFB-201ENST00000343053 PRR26Q8N8Z3 221 aa13.95□□□□□ -0.18
NELFB-201ENST00000343053 LOC101927531A0A1B0GV80 90 aa13.93□□□□□ -0.18
NELFB-201ENST00000343053 KTN1-AS1Q86SY8 53 aa13.93□□□□□ -0.18
NELFB-201ENST00000343053 KRTAP13-3Q3SY46 172 aa13.92□□□□□ -0.18
NELFB-201ENST00000343053 RBM12B-AS1Q9P1G2 102 aa13.89□□□□□ -0.19
NELFB-201ENST00000343053 HYDINQ4G0P3 5121 aa13.87□□□□□ -0.19
NELFB-201ENST00000343053 KRTAP13-2Q52LG2 175 aa13.87□□□□□ -0.19
NELFB-201ENST00000343053 LINC01558Q9Y6Z2 57 aa13.87□□□□□ -0.19
NELFB-201ENST00000343053 SSBP3-AS1Q7Z2R9 100 aa13.85□□□□□ -0.19
NELFB-201ENST00000343053 SPINK7P58062 85 aa13.84□□□□□ -0.19
NELFB-201ENST00000343053 LINC00313P59037 77 aa13.84□□□□□ -0.19
NELFB-201ENST00000343053 ATP11AUNQ6ZP68 121 aa13.83□□□□□ -0.2
NELFB-201ENST00000343053 PKD1P98161 4303 aa13.81□□□□□ -0.2
NELFB-201ENST00000343053 A6NN06 94 aa13.8□□□□□ -0.2
NELFB-201ENST00000343053 KRTAP10-1P60331 282 aa13.8□□□□□ -0.2
NELFB-201ENST00000343053 VPS13BQ7Z7G8 4022 aa13.79□□□□□ -0.2
NELFB-201ENST00000343053 C8orf87E5RJ46 101 aa13.77□□□□□ -0.2
NELFB-201ENST00000343053 FAT2Q9NYQ8 4349 aa13.75□□□□□ -0.21
NELFB-201ENST00000343053 CDC42SE1Q9NRR8 79 aa13.73□□□□□ -0.21
NELFB-201ENST00000343053 ACYP2P14621 99 aa13.71□□□□□ -0.22
NELFB-201ENST00000343053 FAM229AH3BQW9 127 aa13.68□□□□□ -0.22
NELFB-201ENST00000343053 IGKV2D-30A0A075B6S6 120 aa13.66□□□□□ -0.22
NELFB-201ENST00000343053 IGKV2-30P06310 120 aa13.66□□□□□ -0.22
NELFB-201ENST00000343053 KRTAP1-4P0C5Y4 121 aa13.64□□□□□ -0.23
NELFB-201ENST00000343053 DMAC1Q96GE9 116 aa13.64□□□□□ -0.23
NELFB-201ENST00000343053 KRTAP16-1A8MUX0 517 aa13.63□□□□□ -0.23
NELFB-201ENST00000343053 PKHD1P08F94 4074 aa13.62□□□□□ -0.23
NELFB-201ENST00000343053 Q6ZSA8 131 aa13.62□□□□□ -0.23
NELFB-201ENST00000343053 C7orf65Q6ZTY9 151 aa13.59□□□□□ -0.23
NELFB-201ENST00000343053 PLA2G1BP04054 148 aaKnown RBP13.57□□□□□ -0.24
NELFB-201ENST00000343053 TYMSOSQ8TAI1 123 aa13.51□□□□□ -0.25
NELFB-201ENST00000343053 C4orf48Q5BLP8 95 aa13.51□□□□□ -0.25
NELFB-201ENST00000343053 A0A1B0GU69 56 aa13.47□□□□□ -0.25
NELFB-201ENST00000343053 SPINK1P00995 79 aa13.39□□□□□ -0.27
NELFB-201ENST00000343053 PRAC1Q96KF2 57 aa13.39□□□□□ -0.27
NELFB-201ENST00000343053 Q8N1X5 172 aa13.38□□□□□ -0.27
NELFB-201ENST00000343053 SMR3BP02814 79 aaPredicted RBP13.36□□□□□ -0.27
NELFB-201ENST00000343053 FAT1Q14517 4588 aa13.33□□□□□ -0.28
NELFB-201ENST00000343053 ADM2Q7Z4H4 148 aa13.33□□□□□ -0.28
NELFB-201ENST00000343053 LINC00304Q8N9R0 145 aa13.29□□□□□ -0.28
NELFB-201ENST00000343053 SACSQ9NZJ4 4579 aa13.29□□□□□ -0.28
NELFB-201ENST00000343053 C9orf92A6NGG3 77 aa13.27□□□□□ -0.28
NELFB-201ENST00000343053 DYNC1H1Q14204 4646 aaKnown RBP13.26□□□□□ -0.29
NELFB-201ENST00000343053 MIR22HGQ0VDD5 57 aa13.21□□□□□ -0.3
NELFB-201ENST00000343053 UQCR11O14957 56 aa13.17□□□□□ -0.3
NELFB-201ENST00000343053 SPATA8Q6RVD6 105 aa13.16□□□□□ -0.3
NELFB-201ENST00000343053 APOBP04114 4563 aaKnown RBP13.06□□□□□ -0.32
NELFB-201ENST00000343053 LINC01554Q52M75 96 aa13.04□□□□□ -0.32
NELFB-201ENST00000343053 PKHD1L1Q86WI1 4243 aa12.99□□□□□ -0.33
NELFB-201ENST00000343053 RPS29P62273 56 aaKnown RBP12.96□□□□□ -0.33
NELFB-201ENST00000343053 KRTAP3-1Q9BYR8 98 aa12.93□□□□□ -0.34
NELFB-201ENST00000343053 A8MUU9 505 aa12.92□□□□□ -0.34
NELFB-201ENST00000343053 C20orf166-AS1Q96NR2 134 aa12.91□□□□□ -0.34
NELFB-201ENST00000343053 KRTAP10-4P60372 401 aaPredicted RBP12.89□□□□□ -0.35
NELFB-201ENST00000343053 FLG2Q5D862 2391 aaPredicted RBP12.86□□□□□ -0.35
NELFB-201ENST00000343053 LRP1Q07954 4544 aaKnown RBP12.85□□□□□ -0.35
NELFB-201ENST00000343053 CSAG1Q6PB30 78 aa12.84□□□□□ -0.35
NELFB-201ENST00000343053 H3BS24 57 aa12.83□□□□□ -0.36
NELFB-201ENST00000343053 H0YAA0 97 aa12.82□□□□□ -0.36
NELFB-201ENST00000343053 A0A1B0GVY2 172 aa12.82□□□□□ -0.36
NELFB-201ENST00000343053 KMT2CQ8NEZ4 4911 aaKnown RBP12.8□□□□□ -0.36
NELFB-201ENST00000343053 RYR2Q92736 4967 aa12.74□□□□□ -0.37
NELFB-201ENST00000343053 MYCBP2O75592 4640 aa12.71□□□□□ -0.38
NELFB-201ENST00000343053 A0A1B0GU33 70 aa12.69□□□□□ -0.38
NELFB-201ENST00000343053 HSPG2P98160 4391 aa12.68□□□□□ -0.38
NELFB-201ENST00000343053 FAT3Q8TDW7 4589 aa12.68□□□□□ -0.38
NELFB-201ENST00000343053 DMBT1Q9UGM3 2413 aaPredicted RBP12.68□□□□□ -0.38
NELFB-201ENST00000343053 H1FX-AS1Q4G0G2 97 aa12.62□□□□□ -0.39
NELFB-201ENST00000343053 COX6B2Q6YFQ2 88 aa12.6□□□□□ -0.39
NELFB-201ENST00000343053 TNXBP22105 4242 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms