RNA–Protein interactions for RNA: ENST00000341547.8

LMO7-202, Transcript of LIM domain 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO7, Length 7,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-202ENST00000341547 ASPMQ8IZT6 3477 aa4.44□□□□□ -1.7
LMO7-202ENST00000341547 M0QZ58 72 aa4.42□□□□□ -1.7
LMO7-202ENST00000341547 SPTBN5Q9NRC6 3674 aaKnown RBP4.42□□□□□ -1.7
LMO7-202ENST00000341547 KRTAP1-1Q07627 177 aa4.42□□□□□ -1.7
LMO7-202ENST00000341547 A8MU10 97 aa4.41□□□□□ -1.7
LMO7-202ENST00000341547 ADM2Q7Z4H4 148 aa4.41□□□□□ -1.7
LMO7-202ENST00000341547 CELSR2Q9HCU4 2923 aa4.4□□□□□ -1.7
LMO7-202ENST00000341547 NDUFAF8A1L188 74 aa4.38□□□□□ -1.71
LMO7-202ENST00000341547 HIVEP1P15822 2718 aa4.37□□□□□ -1.71
LMO7-202ENST00000341547 KRTAP1-5Q9BYS1 174 aa4.37□□□□□ -1.71
LMO7-202ENST00000341547 NOTCH2NLQ7Z3S9 236 aa4.36□□□□□ -1.71
LMO7-202ENST00000341547 IGSF10Q6WRI0 2623 aa4.36□□□□□ -1.71
LMO7-202ENST00000341547 KMT2BQ9UMN6 2715 aaPredicted RBP4.36□□□□□ -1.71
LMO7-202ENST00000341547 PANO1I0J062 215 aa4.35□□□□□ -1.71
LMO7-202ENST00000341547 PLAC4Q8WY50 150 aa4.35□□□□□ -1.71
LMO7-202ENST00000341547 CELSR1Q9NYQ6 3014 aa4.32□□□□□ -1.72
LMO7-202ENST00000341547 C20orf166-AS1Q96NR2 134 aa4.31□□□□□ -1.72
LMO7-202ENST00000341547 LAMA5O15230 3695 aa4.29□□□□□ -1.72
LMO7-202ENST00000341547 SEC61BP60468 96 aaKnown RBP4.29□□□□□ -1.72
LMO7-202ENST00000341547 KRTAP10-2P60368 255 aa4.29□□□□□ -1.72
LMO7-202ENST00000341547 KRTAP10-1P60331 282 aa4.29□□□□□ -1.72
LMO7-202ENST00000341547 CSMD1Q96PZ7 3565 aa4.28□□□□□ -1.72
LMO7-202ENST00000341547 DCHS2Q6V1P9 2916 aa4.27□□□□□ -1.73
LMO7-202ENST00000341547 A8MUU9 505 aa4.26□□□□□ -1.73
LMO7-202ENST00000341547 KRTAP7-1Q8IUC3 87 aa4.26□□□□□ -1.73
LMO7-202ENST00000341547 Q5VSD8 79 aa4.25□□□□□ -1.73
LMO7-202ENST00000341547 ZFHX4Q86UP3 3567 aa4.25□□□□□ -1.73
LMO7-202ENST00000341547 KRTAP11-1Q8IUC1 163 aa4.24□□□□□ -1.73
LMO7-202ENST00000341547 FBN2P35556 2912 aa4.24□□□□□ -1.73
LMO7-202ENST00000341547 NIPBLQ6KC79 2804 aaeCLIP4.22□□□□□ -1.73
LMO7-202ENST00000341547 RELNP78509 3460 aa4.22□□□□□ -1.73
LMO7-202ENST00000341547 KRTAP13-1Q8IUC0 172 aa4.21□□□□□ -1.73
LMO7-202ENST00000341547 MUC3AQ02505 3323 aa4.21□□□□□ -1.74
LMO7-202ENST00000341547 NF1P21359 2839 aa4.21□□□□□ -1.74
LMO7-202ENST00000341547 RPS29P62273 56 aaKnown RBP4.2□□□□□ -1.74
LMO7-202ENST00000341547 C10orf95Q9H7T3 257 aa4.2□□□□□ -1.74
LMO7-202ENST00000341547 CUBNO60494 3623 aa4.19□□□□□ -1.74
LMO7-202ENST00000341547 PDZD2O15018 2839 aa4.17□□□□□ -1.74
LMO7-202ENST00000341547 ZANQ9Y493 2812 aa4.17□□□□□ -1.74
LMO7-202ENST00000341547 TENM1Q9UKZ4 2725 aa4.16□□□□□ -1.74
LMO7-202ENST00000341547 FLNCQ14315 2725 aa4.14□□□□□ -1.75
LMO7-202ENST00000341547 TNP1P09430 55 aa4.11□□□□□ -1.75
LMO7-202ENST00000341547 TGP01266 2768 aa4.1□□□□□ -1.75
LMO7-202ENST00000341547 H0YAA0 97 aa4.1□□□□□ -1.75
LMO7-202ENST00000341547 KRTAP13-2Q52LG2 175 aa4.09□□□□□ -1.75
LMO7-202ENST00000341547 Q6ZRN7 208 aaPredicted RBP4.09□□□□□ -1.76
LMO7-202ENST00000341547 DMDP11532 3685 aa4.07□□□□□ -1.76
LMO7-202ENST00000341547 SMG1Q96Q15 3661 aaKnown RBP4.07□□□□□ -1.76
LMO7-202ENST00000341547 NBPF19A0A087WUL8 3843 aa4.05□□□□□ -1.76
LMO7-202ENST00000341547 TENM3Q9P273 2699 aa4.04□□□□□ -1.76
LMO7-202ENST00000341547 KRTAP10-8P60410 259 aa4.03□□□□□ -1.76
LMO7-202ENST00000341547 PP632Q6XCG6 107 aa4.03□□□□□ -1.76
LMO7-202ENST00000341547 SPENQ96T58 3664 aaKnown RBP4.03□□□□□ -1.77
LMO7-202ENST00000341547 P0C880 135 aa4.02□□□□□ -1.77
LMO7-202ENST00000341547 PKD1L1Q8TDX9 2849 aa4.02□□□□□ -1.77
LMO7-202ENST00000341547 SRRM2Q9UQ35 2752 aaKnown RBP4.01□□□□□ -1.77
LMO7-202ENST00000341547 SVEP1Q4LDE5 3571 aa4.01□□□□□ -1.77
LMO7-202ENST00000341547 MXRA5Q9NR99 2828 aa4.01□□□□□ -1.77
LMO7-202ENST00000341547 HRNRQ86YZ3 2850 aaPredicted RBP4□□□□□ -1.77
LMO7-202ENST00000341547 VWFP04275 2813 aa4□□□□□ -1.77
LMO7-202ENST00000341547 TENM4Q6N022 2769 aa3.99□□□□□ -1.77
LMO7-202ENST00000341547 KRTAP13-3Q3SY46 172 aa3.96□□□□□ -1.78
LMO7-202ENST00000341547 A0A1B0GVY2 172 aa3.94□□□□□ -1.78
LMO7-202ENST00000341547 ZFHX3Q15911 3703 aa3.88□□□□□ -1.79
LMO7-202ENST00000341547 KRTAP1-4P0C5Y4 121 aa3.87□□□□□ -1.79
LMO7-202ENST00000341547 COL7A1Q02388 2944 aa3.86□□□□□ -1.79
LMO7-202ENST00000341547 XP32Q5T750 250 aa3.85□□□□□ -1.79
LMO7-202ENST00000341547 CSMD2Q7Z408 3487 aa3.83□□□□□ -1.8
LMO7-202ENST00000341547 TPRXLQ17RH7 258 aa3.81□□□□□ -1.8
LMO7-202ENST00000341547 TENM2Q9NT68 2774 aa3.8□□□□□ -1.8
LMO7-202ENST00000341547 MEGF8Q7Z7M0 2845 aa3.8□□□□□ -1.8
LMO7-202ENST00000341547 KRTAP10-10P60014 251 aa3.78□□□□□ -1.8
LMO7-202ENST00000341547 KRTAP12-2P59991 146 aa3.78□□□□□ -1.8
LMO7-202ENST00000341547 BSNQ9UPA5 3926 aa3.77□□□□□ -1.81
LMO7-202ENST00000341547 FBN1P35555 2871 aaKnown RBP3.76□□□□□ -1.81
LMO7-202ENST00000341547 FBN3Q75N90 2809 aa3.76□□□□□ -1.81
LMO7-202ENST00000341547 KRTAP15-1Q3LI76 137 aa3.73□□□□□ -1.81
LMO7-202ENST00000341547 PRO2289Q9P1D8 64 aa3.72□□□□□ -1.81
LMO7-202ENST00000341547 OTOGQ6ZRI0 2925 aa3.72□□□□□ -1.81
LMO7-202ENST00000341547 CSMD3Q7Z407 3707 aa3.71□□□□□ -1.82
LMO7-202ENST00000341547 KRTAP12-1P59990 96 aa3.71□□□□□ -1.82
LMO7-202ENST00000341547 KRTAP13-4Q3LI77 160 aa3.7□□□□□ -1.82
LMO7-202ENST00000341547 VPS13CQ709C8 3753 aa3.7□□□□□ -1.82
LMO7-202ENST00000341547 TRRAPQ9Y4A5 3859 aa3.67□□□□□ -1.82
LMO7-202ENST00000341547 KRTAP3-1Q9BYR8 98 aa3.67□□□□□ -1.82
LMO7-202ENST00000341547 INE1O15225 51 aa3.61□□□□□ -1.83
LMO7-202ENST00000341547 KRTAP10-6P60371 365 aaPredicted RBP3.61□□□□□ -1.83
LMO7-202ENST00000341547 KRTAP3-2Q9BYR7 98 aa3.48□□□□□ -1.85
LMO7-202ENST00000341547 KRTAP21-3Q3LHN1 58 aa3.44□□□□□ -1.86
LMO7-202ENST00000341547 KRTAP3-3Q9BYR6 98 aa3.44□□□□□ -1.86
LMO7-202ENST00000341547 ZNF469Q96JG9 3925 aaPredicted RBP3.43□□□□□ -1.86
LMO7-202ENST00000341547 KRTAP23-1A1A580 65 aa3.4□□□□□ -1.87
LMO7-202ENST00000341547 CRCT1Q9UGL9 99 aa3.4□□□□□ -1.87
LMO7-202ENST00000341547 AKAP9Q99996 3911 aa3.39□□□□□ -1.87
LMO7-202ENST00000341547 KRTAP10-12P60413 245 aa3.31□□□□□ -1.88
LMO7-202ENST00000341547 ANK3Q12955 4377 aaKnown RBP3.29□□□□□ -1.88
LMO7-202ENST00000341547 ALMS1Q8TCU4 4167 aa3.28□□□□□ -1.88
LMO7-202ENST00000341547 KRTAP12-3P60328 96 aa3.24□□□□□ -1.89
LMO7-202ENST00000341547 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
LMO7-202ENST00000341547 HUWE1Q7Z6Z7 4374 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms