RNA–Protein interactions for RNA: ENST00000341255.3

RTL6-201, Transcript of retrotransposon Gag like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTL6, Length 5,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6-201ENST00000341255 ASH1LQ9NR48 2969 aaKnown RBP9.1□□□□□ -0.95
RTL6-201ENST00000341255 FRYLO94915 3013 aa9.09□□□□□ -0.95
RTL6-201ENST00000341255 TENM4Q6N022 2769 aa9.08□□□□□ -0.96
RTL6-201ENST00000341255 KRTAP16-1A8MUX0 517 aa9.05□□□□□ -0.96
RTL6-201ENST00000341255 VCANP13611 3396 aa9.05□□□□□ -0.96
RTL6-201ENST00000341255 ADGRG4Q8IZF6 3080 aa9.04□□□□□ -0.96
RTL6-201ENST00000341255 DNAH14Q0VDD8 3507 aa9.03□□□□□ -0.96
RTL6-201ENST00000341255 LAMA1P25391 3075 aa9.03□□□□□ -0.96
RTL6-201ENST00000341255 A8MUU9 505 aa9.01□□□□□ -0.97
RTL6-201ENST00000341255 LRBAP50851 2863 aa8.99□□□□□ -0.97
RTL6-201ENST00000341255 CELSR2Q9HCU4 2923 aa8.97□□□□□ -0.97
RTL6-201ENST00000341255 NDUFAF8A1L188 74 aa8.96□□□□□ -0.98
RTL6-201ENST00000341255 BOD1L1Q8NFC6 3051 aa8.95□□□□□ -0.98
RTL6-201ENST00000341255 ZZEF1O43149 2961 aa8.93□□□□□ -0.98
RTL6-201ENST00000341255 SZT2Q5T011 3432 aa8.92□□□□□ -0.98
RTL6-201ENST00000341255 KRTAP21-3Q3LHN1 58 aa8.9□□□□□ -0.99
RTL6-201ENST00000341255 C20orf166-AS1Q96NR2 134 aa8.88□□□□□ -0.99
RTL6-201ENST00000341255 CRYBG3Q68DQ2 2970 aa8.87□□□□□ -0.99
RTL6-201ENST00000341255 COL6A3P12111 3177 aa8.86□□□□□ -0.99
RTL6-201ENST00000341255 DCHS2Q6V1P9 2916 aa8.85□□□□□ -0.99
RTL6-201ENST00000341255 ZANQ9Y493 2812 aa8.8□□□□□ -1
RTL6-201ENST00000341255 CFAP47Q6ZTR5 3102 aa8.78□□□□□ -1
RTL6-201ENST00000341255 EYSQ5T1H1 3165 aa8.75□□□□□ -1.01
RTL6-201ENST00000341255 TENM3Q9P273 2699 aa8.72□□□□□ -1.01
RTL6-201ENST00000341255 KRTAP1-4P0C5Y4 121 aa8.71□□□□□ -1.01
RTL6-201ENST00000341255 TNP1P09430 55 aa8.69□□□□□ -1.02
RTL6-201ENST00000341255 C10orf95Q9H7T3 257 aa8.67□□□□□ -1.02
RTL6-201ENST00000341255 H0YAA0 97 aa8.65□□□□□ -1.02
RTL6-201ENST00000341255 XP32Q5T750 250 aa8.63□□□□□ -1.03
RTL6-201ENST00000341255 NF1P21359 2839 aa8.6□□□□□ -1.03
RTL6-201ENST00000341255 TENM1Q9UKZ4 2725 aa8.59□□□□□ -1.03
RTL6-201ENST00000341255 FBN2P35556 2912 aa8.55□□□□□ -1.04
RTL6-201ENST00000341255 SPEGQ15772 3267 aa8.54□□□□□ -1.04
RTL6-201ENST00000341255 HRNRQ86YZ3 2850 aaPredicted RBP8.54□□□□□ -1.04
RTL6-201ENST00000341255 TNRC18O15417 2968 aaPredicted RBP8.51□□□□□ -1.05
RTL6-201ENST00000341255 PP632Q6XCG6 107 aa8.49□□□□□ -1.05
RTL6-201ENST00000341255 TPRXLQ17RH7 258 aa8.48□□□□□ -1.05
RTL6-201ENST00000341255 DMXL1Q9Y485 3027 aa8.47□□□□□ -1.05
RTL6-201ENST00000341255 USP34Q70CQ2 3546 aa8.46□□□□□ -1.06
RTL6-201ENST00000341255 SPTBN5Q9NRC6 3674 aaKnown RBP8.45□□□□□ -1.06
RTL6-201ENST00000341255 P0C880 135 aa8.45□□□□□ -1.06
RTL6-201ENST00000341255 KRTAP10-8P60410 259 aa8.42□□□□□ -1.06
RTL6-201ENST00000341255 TENM2Q9NT68 2774 aa8.41□□□□□ -1.06
RTL6-201ENST00000341255 A0A1B0GVY2 172 aa8.39□□□□□ -1.07
RTL6-201ENST00000341255 KRTAP13-3Q3SY46 172 aa8.35□□□□□ -1.07
RTL6-201ENST00000341255 CELSR1Q9NYQ6 3014 aa8.34□□□□□ -1.07
RTL6-201ENST00000341255 LOC400499M0QZD8 3231 aa8.33□□□□□ -1.08
RTL6-201ENST00000341255 MXRA5Q9NR99 2828 aa8.33□□□□□ -1.08
RTL6-201ENST00000341255 TGP01266 2768 aa8.32□□□□□ -1.08
RTL6-201ENST00000341255 PKD1L1Q8TDX9 2849 aa8.3□□□□□ -1.08
RTL6-201ENST00000341255 KRTAP10-10P60014 251 aa8.25□□□□□ -1.09
RTL6-201ENST00000341255 MYO15AQ9UKN7 3530 aa8.2□□□□□ -1.1
RTL6-201ENST00000341255 PDZD2O15018 2839 aa8.15□□□□□ -1.1
RTL6-201ENST00000341255 PRO2289Q9P1D8 64 aa8.15□□□□□ -1.11
RTL6-201ENST00000341255 VWFP04275 2813 aa8.15□□□□□ -1.11
RTL6-201ENST00000341255 KRTAP12-2P59991 146 aa8.1□□□□□ -1.11
RTL6-201ENST00000341255 DCHS1Q96JQ0 3298 aa8.06□□□□□ -1.12
RTL6-201ENST00000341255 WDFY3Q8IZQ1 3526 aa8.06□□□□□ -1.12
RTL6-201ENST00000341255 RELNP78509 3460 aa8.01□□□□□ -1.13
RTL6-201ENST00000341255 KRTAP12-1P59990 96 aa7.93□□□□□ -1.14
RTL6-201ENST00000341255 KRTAP3-1Q9BYR8 98 aa7.92□□□□□ -1.14
RTL6-201ENST00000341255 FBN1P35555 2871 aaKnown RBP7.9□□□□□ -1.15
RTL6-201ENST00000341255 SRRM2Q9UQ35 2752 aaKnown RBP7.9□□□□□ -1.15
RTL6-201ENST00000341255 ZFHX4Q86UP3 3567 aa7.89□□□□□ -1.15
RTL6-201ENST00000341255 KRTAP13-4Q3LI77 160 aa7.88□□□□□ -1.15
RTL6-201ENST00000341255 ASPMQ8IZT6 3477 aa7.83□□□□□ -1.16
RTL6-201ENST00000341255 CSMD1Q96PZ7 3565 aa7.81□□□□□ -1.16
RTL6-201ENST00000341255 OTOGQ6ZRI0 2925 aa7.75□□□□□ -1.17
RTL6-201ENST00000341255 LAMA5O15230 3695 aa7.72□□□□□ -1.17
RTL6-201ENST00000341255 KRTAP10-6P60371 365 aaPredicted RBP7.72□□□□□ -1.17
RTL6-201ENST00000341255 FBN3Q75N90 2809 aa7.71□□□□□ -1.18
RTL6-201ENST00000341255 NBPF19A0A087WUL8 3843 aa7.63□□□□□ -1.19
RTL6-201ENST00000341255 SMG1Q96Q15 3661 aaKnown RBP7.63□□□□□ -1.19
RTL6-201ENST00000341255 MEGF8Q7Z7M0 2845 aa7.6□□□□□ -1.19
RTL6-201ENST00000341255 ZFHX3Q15911 3703 aa7.58□□□□□ -1.2
RTL6-201ENST00000341255 COL7A1Q02388 2944 aa7.55□□□□□ -1.2
RTL6-201ENST00000341255 KRTAP15-1Q3LI76 137 aa7.5□□□□□ -1.21
RTL6-201ENST00000341255 SVEP1Q4LDE5 3571 aa7.49□□□□□ -1.21
RTL6-201ENST00000341255 MT1HL1P0DM35 61 aa7.46□□□□□ -1.21
RTL6-201ENST00000341255 DMDP11532 3685 aa7.44□□□□□ -1.22
RTL6-201ENST00000341255 KRTAP3-2Q9BYR7 98 aa7.44□□□□□ -1.22
RTL6-201ENST00000341255 ANK3Q12955 4377 aaKnown RBP7.43□□□□□ -1.22
RTL6-201ENST00000341255 CUBNO60494 3623 aa7.41□□□□□ -1.22
RTL6-201ENST00000341255 KRTAP3-3Q9BYR6 98 aa7.41□□□□□ -1.22
RTL6-201ENST00000341255 CSMD2Q7Z408 3487 aa7.29□□□□□ -1.24
RTL6-201ENST00000341255 KRTAP10-4P60372 401 aaPredicted RBP7.26□□□□□ -1.25
RTL6-201ENST00000341255 TRRAPQ9Y4A5 3859 aa7.26□□□□□ -1.25
RTL6-201ENST00000341255 MUC3AQ02505 3323 aa7.23□□□□□ -1.25
RTL6-201ENST00000341255 INE1O15225 51 aa7.21□□□□□ -1.25
RTL6-201ENST00000341255 SPENQ96T58 3664 aaKnown RBP7.2□□□□□ -1.26
RTL6-201ENST00000341255 KRTAP10-12P60413 245 aa7.17□□□□□ -1.26
RTL6-201ENST00000341255 KRTAP4-5Q9BYR2 181 aa7.14□□□□□ -1.27
RTL6-201ENST00000341255 HUWE1Q7Z6Z7 4374 aaKnown RBP7.08□□□□□ -1.28
RTL6-201ENST00000341255 KRTAP12-3P60328 96 aa6.99□□□□□ -1.29
RTL6-201ENST00000341255 CRCT1Q9UGL9 99 aa6.97□□□□□ -1.29
RTL6-201ENST00000341255 LORP23490 312 aaPredicted RBP6.97□□□□□ -1.29
RTL6-201ENST00000341255 LCE3AQ5TA76 89 aa6.96□□□□□ -1.3
RTL6-201ENST00000341255 KRTAP23-1A1A580 65 aa6.95□□□□□ -1.3
RTL6-201ENST00000341255 BSNQ9UPA5 3926 aa6.94□□□□□ -1.3
RTL6-201ENST00000341255 VPS13CQ709C8 3753 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms