RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 KLKP1Q107X0 134 aa7.3□□□□□ -1.24
LIN54-201ENST00000340417 LAMA5O15230 3695 aa7.3□□□□□ -1.24
LIN54-201ENST00000340417 OCR1Q9BZK8 76 aa7.29□□□□□ -1.24
LIN54-201ENST00000340417 R4GN34 69 aa7.29□□□□□ -1.24
LIN54-201ENST00000340417 MIR22HGQ0VDD5 57 aa7.28□□□□□ -1.24
LIN54-201ENST00000340417 A0A1B0GVY2 172 aa7.27□□□□□ -1.25
LIN54-201ENST00000340417 ASB16-AS1Q495Z4 193 aa7.27□□□□□ -1.25
LIN54-201ENST00000340417 OTOGQ6ZRI0 2925 aa7.27□□□□□ -1.25
LIN54-201ENST00000340417 DMDP11532 3685 aa7.26□□□□□ -1.25
LIN54-201ENST00000340417 RPL37P61927 97 aaKnown RBP7.25□□□□□ -1.25
LIN54-201ENST00000340417 Q75L30 129 aa7.25□□□□□ -1.25
LIN54-201ENST00000340417 ASPMQ8IZT6 3477 aa7.25□□□□□ -1.25
LIN54-201ENST00000340417 TENM1Q9UKZ4 2725 aa7.22□□□□□ -1.25
LIN54-201ENST00000340417 CRIPTQ9P021 101 aa7.21□□□□□ -1.25
LIN54-201ENST00000340417 Q5XG85 94 aa7.21□□□□□ -1.26
LIN54-201ENST00000340417 LCA10Q71F78 164 aa7.2□□□□□ -1.26
LIN54-201ENST00000340417 KRTAP29-1A8MX34 341 aaPredicted RBP7.19□□□□□ -1.26
LIN54-201ENST00000340417 A0A1B0GU33 70 aa7.18□□□□□ -1.26
LIN54-201ENST00000340417 H7BZZ5 65 aa7.18□□□□□ -1.26
LIN54-201ENST00000340417 H1FX-AS1Q4G0G2 97 aa7.17□□□□□ -1.26
LIN54-201ENST00000340417 PLAC4Q8WY50 150 aa7.16□□□□□ -1.26
LIN54-201ENST00000340417 ZFHX3Q15911 3703 aa7.16□□□□□ -1.26
LIN54-201ENST00000340417 TENM3Q9P273 2699 aa7.16□□□□□ -1.26
LIN54-201ENST00000340417 C20orf166-AS1Q96NR2 134 aa7.16□□□□□ -1.26
LIN54-201ENST00000340417 CELSR1Q9NYQ6 3014 aa7.16□□□□□ -1.26
LIN54-201ENST00000340417 NOTCH2NLQ7Z3S9 236 aa7.15□□□□□ -1.26
LIN54-201ENST00000340417 KRTAP1-4P0C5Y4 121 aa7.15□□□□□ -1.27
LIN54-201ENST00000340417 WDFY3Q8IZQ1 3526 aa7.15□□□□□ -1.27
LIN54-201ENST00000340417 M0QZ58 72 aa7.14□□□□□ -1.27
LIN54-201ENST00000340417 RPS28P62857 69 aaKnown RBP7.13□□□□□ -1.27
LIN54-201ENST00000340417 CDC42SE1Q9NRR8 79 aa7.11□□□□□ -1.27
LIN54-201ENST00000340417 ADM2Q7Z4H4 148 aa7.1□□□□□ -1.27
LIN54-201ENST00000340417 PKD1L1Q8TDX9 2849 aa7.09□□□□□ -1.28
LIN54-201ENST00000340417 TPRXLQ17RH7 258 aa7.08□□□□□ -1.28
LIN54-201ENST00000340417 ANK3Q12955 4377 aaKnown RBP7.07□□□□□ -1.28
LIN54-201ENST00000340417 DMAC1Q96GE9 116 aa7.06□□□□□ -1.28
LIN54-201ENST00000340417 XP32Q5T750 250 aa7.05□□□□□ -1.28
LIN54-201ENST00000340417 SMG1Q96Q15 3661 aaKnown RBP7.05□□□□□ -1.28
LIN54-201ENST00000340417 FBN1P35555 2871 aaKnown RBP7.04□□□□□ -1.28
LIN54-201ENST00000340417 A8MUU9 505 aa6.99□□□□□ -1.29
LIN54-201ENST00000340417 PRO0628Q9UI54 55 aa6.98□□□□□ -1.29
LIN54-201ENST00000340417 ZFHX4Q86UP3 3567 aa6.96□□□□□ -1.3
LIN54-201ENST00000340417 KRTAP10-8P60410 259 aa6.96□□□□□ -1.3
LIN54-201ENST00000340417 VWFP04275 2813 aa6.92□□□□□ -1.3
LIN54-201ENST00000340417 CSMD1Q96PZ7 3565 aa6.91□□□□□ -1.3
LIN54-201ENST00000340417 KRTAP13-3Q3SY46 172 aa6.9□□□□□ -1.31
LIN54-201ENST00000340417 LINC01558Q9Y6Z2 57 aa6.87□□□□□ -1.31
LIN54-201ENST00000340417 TGP01266 2768 aa6.86□□□□□ -1.31
LIN54-201ENST00000340417 Q1T7F1 81 aa6.85□□□□□ -1.31
LIN54-201ENST00000340417 CSMD2Q7Z408 3487 aa6.85□□□□□ -1.31
LIN54-201ENST00000340417 KRTAP10-10P60014 251 aa6.81□□□□□ -1.32
LIN54-201ENST00000340417 FBN3Q75N90 2809 aa6.79□□□□□ -1.32
LIN54-201ENST00000340417 SPENQ96T58 3664 aaKnown RBP6.79□□□□□ -1.32
LIN54-201ENST00000340417 BSNQ9UPA5 3926 aa6.78□□□□□ -1.32
LIN54-201ENST00000340417 SPATA8Q6RVD6 105 aa6.78□□□□□ -1.32
LIN54-201ENST00000340417 CYSTM1Q9H1C7 97 aa6.69□□□□□ -1.34
LIN54-201ENST00000340417 TRRAPQ9Y4A5 3859 aa6.67□□□□□ -1.34
LIN54-201ENST00000340417 LUZP6Q538Z0 58 aa6.63□□□□□ -1.35
LIN54-201ENST00000340417 KRTAP4-5Q9BYR2 181 aa6.62□□□□□ -1.35
LIN54-201ENST00000340417 KRTAP16-1A8MUX0 517 aa6.61□□□□□ -1.35
LIN54-201ENST00000340417 ROMO1P60602 79 aa6.61□□□□□ -1.35
LIN54-201ENST00000340417 Q5VV11 94 aa6.59□□□□□ -1.35
LIN54-201ENST00000340417 KTN1-AS1Q86SY8 53 aa6.57□□□□□ -1.36
LIN54-201ENST00000340417 HUWE1Q7Z6Z7 4374 aaKnown RBP6.55□□□□□ -1.36
LIN54-201ENST00000340417 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
LIN54-201ENST00000340417 SVEP1Q4LDE5 3571 aa6.53□□□□□ -1.36
LIN54-201ENST00000340417 A8MU10 97 aa6.53□□□□□ -1.36
LIN54-201ENST00000340417 MT1HL1P0DM35 61 aa6.53□□□□□ -1.36
LIN54-201ENST00000340417 ALMS1Q8TCU4 4167 aa6.52□□□□□ -1.37
LIN54-201ENST00000340417 TNP1P09430 55 aa6.51□□□□□ -1.37
LIN54-201ENST00000340417 AKAP9Q99996 3911 aa6.49□□□□□ -1.37
LIN54-201ENST00000340417 SRRM2Q9UQ35 2752 aaKnown RBP6.45□□□□□ -1.38
LIN54-201ENST00000340417 COL7A1Q02388 2944 aa6.44□□□□□ -1.38
LIN54-201ENST00000340417 PRAC1Q96KF2 57 aa6.37□□□□□ -1.39
LIN54-201ENST00000340417 KRTAP10-4P60372 401 aaPredicted RBP6.35□□□□□ -1.39
LIN54-201ENST00000340417 DNAH9Q9NYC9 4486 aa6.34□□□□□ -1.39
LIN54-201ENST00000340417 MEGF8Q7Z7M0 2845 aa6.32□□□□□ -1.4
LIN54-201ENST00000340417 ZNF469Q96JG9 3925 aaPredicted RBP6.3□□□□□ -1.4
LIN54-201ENST00000340417 P0C880 135 aa6.27□□□□□ -1.41
LIN54-201ENST00000340417 CUBNO60494 3623 aa6.25□□□□□ -1.41
LIN54-201ENST00000340417 DNHD1Q96M86 4753 aa6.25□□□□□ -1.41
LIN54-201ENST00000340417 VPS13CQ709C8 3753 aa6.24□□□□□ -1.41
LIN54-201ENST00000340417 A6NN06 94 aa6.14□□□□□ -1.43
LIN54-201ENST00000340417 DNAH1Q9P2D7 4330 aa6.09□□□□□ -1.43
LIN54-201ENST00000340417 PP632Q6XCG6 107 aa6.09□□□□□ -1.43
LIN54-201ENST00000340417 A0A0A0MQY5 61 aa6.09□□□□□ -1.43
LIN54-201ENST00000340417 KRTAP25-1Q3LHN0 102 aa6.08□□□□□ -1.44
LIN54-201ENST00000340417 H0YAA0 97 aa6.07□□□□□ -1.44
LIN54-201ENST00000340417 DNAH5Q8TE73 4624 aa6.04□□□□□ -1.44
LIN54-201ENST00000340417 DNAH11Q96DT5 4516 aa6.03□□□□□ -1.44
LIN54-201ENST00000340417 C10orf95Q9H7T3 257 aa6.02□□□□□ -1.45
LIN54-201ENST00000340417 KRTAP3-1Q9BYR8 98 aa6.01□□□□□ -1.45
LIN54-201ENST00000340417 PLECQ15149 4684 aaKnown RBP5.98□□□□□ -1.45
LIN54-201ENST00000340417 ANK2Q01484 3957 aa5.98□□□□□ -1.45
LIN54-201ENST00000340417 DNAH10Q8IVF4 4471 aa5.91□□□□□ -1.46
LIN54-201ENST00000340417 PRKDCP78527 4128 aaKnown RBP5.9□□□□□ -1.46
LIN54-201ENST00000340417 VPS13DQ5THJ4 4388 aa5.9□□□□□ -1.46
LIN54-201ENST00000340417 H3BS24 57 aa5.9□□□□□ -1.47
LIN54-201ENST00000340417 KRTAP12-2P59991 146 aa5.87□□□□□ -1.47
LIN54-201ENST00000340417 DYNC1H1Q14204 4646 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 270.1 ms