RNA–Protein interactions for RNA: ENST00000338957.4

ZC3H12B-201, Transcript of zinc finger CCCH-type containing 12B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZC3H12B, Length 7,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12B-201ENST00000338957 FREM2Q5SZK8 3169 aa2.6□□□□□ -1.99
ZC3H12B-201ENST00000338957 RANBP2P49792 3224 aaKnown RBP2.59□□□□□ -1.99
ZC3H12B-201ENST00000338957 TRANK1O15050 2925 aa2.59□□□□□ -1.99
ZC3H12B-201ENST00000338957 PRUNE2Q8WUY3 3088 aa2.57□□□□□ -2
ZC3H12B-201ENST00000338957 LAMA3Q16787 3333 aa2.57□□□□□ -2
ZC3H12B-201ENST00000338957 NIPBLQ6KC79 2804 aaeCLIP2.57□□□□□ -2
ZC3H12B-201ENST00000338957 ITPR2Q14571 2701 aa2.56□□□□□ -2
ZC3H12B-201ENST00000338957 DMXL2Q8TDJ6 3036 aa2.56□□□□□ -2
ZC3H12B-201ENST00000338957 TENM2Q9NT68 2774 aa2.56□□□□□ -2
ZC3H12B-201ENST00000338957 LAMA2P24043 3122 aaKnown RBP2.55□□□□□ -2
ZC3H12B-201ENST00000338957 HTTP42858 3142 aa2.55□□□□□ -2
ZC3H12B-201ENST00000338957 FLNCQ14315 2725 aa2.55□□□□□ -2
ZC3H12B-201ENST00000338957 ZFHX3Q15911 3703 aa2.55□□□□□ -2
ZC3H12B-201ENST00000338957 UTP20O75691 2785 aaKnown RBP2.55□□□□□ -2
ZC3H12B-201ENST00000338957 BRCA2P51587 3418 aa2.55□□□□□ -2
ZC3H12B-201ENST00000338957 ASH1LQ9NR48 2969 aaKnown RBP2.54□□□□□ -2
ZC3H12B-201ENST00000338957 KRTAP13-4Q3LI77 160 aa2.53□□□□□ -2
ZC3H12B-201ENST00000338957 TRIOO75962 3097 aa2.53□□□□□ -2
ZC3H12B-201ENST00000338957 KRTAP3-3Q9BYR6 98 aa2.52□□□□□ -2.01
ZC3H12B-201ENST00000338957 KRTAP3-2Q9BYR7 98 aa2.52□□□□□ -2.01
ZC3H12B-201ENST00000338957 ATMQ13315 3056 aa2.51□□□□□ -2.01
ZC3H12B-201ENST00000338957 MKI67P46013 3256 aaKnown RBP2.51□□□□□ -2.01
ZC3H12B-201ENST00000338957 XIRP2A4UGR9 3374 aa2.51□□□□□ -2.01
ZC3H12B-201ENST00000338957 KRTAP12-1P59990 96 aa2.51□□□□□ -2.01
ZC3H12B-201ENST00000338957 VPS13AQ96RL7 3174 aa2.51□□□□□ -2.01
ZC3H12B-201ENST00000338957 APCP25054 2843 aa2.49□□□□□ -2.01
ZC3H12B-201ENST00000338957 LAMA1P25391 3075 aa2.49□□□□□ -2.01
ZC3H12B-201ENST00000338957 KRTAP3-1Q9BYR8 98 aa2.49□□□□□ -2.01
ZC3H12B-201ENST00000338957 UNC80Q8N2C7 3258 aa2.49□□□□□ -2.01
ZC3H12B-201ENST00000338957 TENM3Q9P273 2699 aa2.49□□□□□ -2.01
ZC3H12B-201ENST00000338957 COL12A1Q99715 3063 aa2.48□□□□□ -2.01
ZC3H12B-201ENST00000338957 KRTAP10-6P60371 365 aaPredicted RBP2.46□□□□□ -2.02
ZC3H12B-201ENST00000338957 CFAP47Q6ZTR5 3102 aa2.46□□□□□ -2.02
ZC3H12B-201ENST00000338957 KALRNO60229 2985 aa2.46□□□□□ -2.02
ZC3H12B-201ENST00000338957 VCANP13611 3396 aa2.45□□□□□ -2.02
ZC3H12B-201ENST00000338957 LRBAP50851 2863 aa2.44□□□□□ -2.02
ZC3H12B-201ENST00000338957 CELSR2Q9HCU4 2923 aa2.43□□□□□ -2.02
ZC3H12B-201ENST00000338957 CELSR3Q9NYQ7 3312 aa2.43□□□□□ -2.02
ZC3H12B-201ENST00000338957 TENM1Q9UKZ4 2725 aa2.43□□□□□ -2.02
ZC3H12B-201ENST00000338957 DCHS2Q6V1P9 2916 aa2.42□□□□□ -2.02
ZC3H12B-201ENST00000338957 EYSQ5T1H1 3165 aa2.41□□□□□ -2.02
ZC3H12B-201ENST00000338957 KRTAP10-12P60413 245 aa2.41□□□□□ -2.02
ZC3H12B-201ENST00000338957 KRTAP10-5P60370 271 aa2.4□□□□□ -2.03
ZC3H12B-201ENST00000338957 KRTAP10-7P60409 375 aaPredicted RBP2.4□□□□□ -2.03
ZC3H12B-201ENST00000338957 KRTAP4-5Q9BYR2 181 aa2.4□□□□□ -2.03
ZC3H12B-201ENST00000338957 BOD1L1Q8NFC6 3051 aa2.4□□□□□ -2.03
ZC3H12B-201ENST00000338957 TGP01266 2768 aa2.4□□□□□ -2.03
ZC3H12B-201ENST00000338957 PKD1L1Q8TDX9 2849 aa2.38□□□□□ -2.03
ZC3H12B-201ENST00000338957 CDH23Q9H251 3354 aa2.38□□□□□ -2.03
ZC3H12B-201ENST00000338957 LORP23490 312 aaPredicted RBP2.37□□□□□ -2.03
ZC3H12B-201ENST00000338957 SZT2Q5T011 3432 aa2.37□□□□□ -2.03
ZC3H12B-201ENST00000338957 NF1P21359 2839 aa2.37□□□□□ -2.03
ZC3H12B-201ENST00000338957 VWFP04275 2813 aa2.37□□□□□ -2.03
ZC3H12B-201ENST00000338957 ZZEF1O43149 2961 aa2.36□□□□□ -2.03
ZC3H12B-201ENST00000338957 COL6A3P12111 3177 aa2.36□□□□□ -2.03
ZC3H12B-201ENST00000338957 FRYLO94915 3013 aa2.35□□□□□ -2.03
ZC3H12B-201ENST00000338957 HERC1Q15751 4861 aa2.34□□□□□ -2.04
ZC3H12B-201ENST00000338957 MT1HL1P0DM35 61 aa2.34□□□□□ -2.04
ZC3H12B-201ENST00000338957 LCE2DQ5TA82 110 aaPredicted RBP2.33□□□□□ -2.04
ZC3H12B-201ENST00000338957 ADGRG4Q8IZF6 3080 aa2.33□□□□□ -2.04
ZC3H12B-201ENST00000338957 KRTAP12-3P60328 96 aa2.32□□□□□ -2.04
ZC3H12B-201ENST00000338957 LCE3AQ5TA76 89 aa2.32□□□□□ -2.04
ZC3H12B-201ENST00000338957 DNAH14Q0VDD8 3507 aa2.32□□□□□ -2.04
ZC3H12B-201ENST00000338957 PDZD2O15018 2839 aa2.31□□□□□ -2.04
ZC3H12B-201ENST00000338957 SRRM2Q9UQ35 2752 aaKnown RBP2.31□□□□□ -2.04
ZC3H12B-201ENST00000338957 NBEAQ8NFP9 2946 aa2.3□□□□□ -2.04
ZC3H12B-201ENST00000338957 KRTAP10-4P60372 401 aaPredicted RBP2.3□□□□□ -2.04
ZC3H12B-201ENST00000338957 KRTAP8-1Q8IUC2 63 aa2.3□□□□□ -2.04
ZC3H12B-201ENST00000338957 SPEGQ15772 3267 aa2.29□□□□□ -2.04
ZC3H12B-201ENST00000338957 FBN3Q75N90 2809 aa2.28□□□□□ -2.04
ZC3H12B-201ENST00000338957 USP34Q70CQ2 3546 aa2.28□□□□□ -2.04
ZC3H12B-201ENST00000338957 CELSR1Q9NYQ6 3014 aa2.28□□□□□ -2.05
ZC3H12B-201ENST00000338957 SPTBN5Q9NRC6 3674 aaKnown RBP2.27□□□□□ -2.05
ZC3H12B-201ENST00000338957 HRNRQ86YZ3 2850 aaPredicted RBP2.27□□□□□ -2.05
ZC3H12B-201ENST00000338957 ZANQ9Y493 2812 aa2.27□□□□□ -2.05
ZC3H12B-201ENST00000338957 DMXL1Q9Y485 3027 aa2.26□□□□□ -2.05
ZC3H12B-201ENST00000338957 RYR1P21817 5038 aa2.25□□□□□ -2.05
ZC3H12B-201ENST00000338957 TNRC18O15417 2968 aaPredicted RBP2.25□□□□□ -2.05
ZC3H12B-201ENST00000338957 FBN2P35556 2912 aa2.23□□□□□ -2.05
ZC3H12B-201ENST00000338957 MXRA5Q9NR99 2828 aa2.22□□□□□ -2.05
ZC3H12B-201ENST00000338957 MYO15AQ9UKN7 3530 aa2.21□□□□□ -2.06
ZC3H12B-201ENST00000338957 LCE2CQ5TA81 110 aa2.19□□□□□ -2.06
ZC3H12B-201ENST00000338957 FBN1P35555 2871 aaKnown RBP2.18□□□□□ -2.06
ZC3H12B-201ENST00000338957 ZFHX4Q86UP3 3567 aa2.18□□□□□ -2.06
ZC3H12B-201ENST00000338957 WDFY3Q8IZQ1 3526 aa2.17□□□□□ -2.06
ZC3H12B-201ENST00000338957 SPRR2FQ96RM1 72 aa2.17□□□□□ -2.06
ZC3H12B-201ENST00000338957 DNAH2Q9P225 4427 aa2.16□□□□□ -2.06
ZC3H12B-201ENST00000338957 DNAH10Q8IVF4 4471 aa2.16□□□□□ -2.06
ZC3H12B-201ENST00000338957 DCHS1Q96JQ0 3298 aa2.15□□□□□ -2.06
ZC3H12B-201ENST00000338957 LOC400499M0QZD8 3231 aa2.15□□□□□ -2.06
ZC3H12B-201ENST00000338957 LCE2BO14633 110 aa2.14□□□□□ -2.07
ZC3H12B-201ENST00000338957 OTOGQ6ZRI0 2925 aa2.14□□□□□ -2.07
ZC3H12B-201ENST00000338957 RYR2Q92736 4967 aa2.13□□□□□ -2.07
ZC3H12B-201ENST00000338957 KRTAP19-4Q3LI73 84 aa2.13□□□□□ -2.07
ZC3H12B-201ENST00000338957 PCLOQ9Y6V0 5065 aa2.13□□□□□ -2.07
ZC3H12B-201ENST00000338957 DNAH17Q9UFH2 4485 aa2.13□□□□□ -2.07
ZC3H12B-201ENST00000338957 LCE2AQ5TA79 106 aaPredicted RBP2.13□□□□□ -2.07
ZC3H12B-201ENST00000338957 HUWE1Q7Z6Z7 4374 aaKnown RBP2.13□□□□□ -2.07
ZC3H12B-201ENST00000338957 RELNP78509 3460 aa2.13□□□□□ -2.07
ZC3H12B-201ENST00000338957 DNAH11Q96DT5 4516 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms