RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 Q8NDZ9 215 aa7.2□□□□□ -1.26
FN1-202ENST00000336916 Q5VV11 94 aa7.18□□□□□ -1.26
FN1-202ENST00000336916 CELSR1Q9NYQ6 3014 aa7.17□□□□□ -1.26
FN1-202ENST00000336916 TENM4Q6N022 2769 aa7.17□□□□□ -1.26
FN1-202ENST00000336916 ATMQ13315 3056 aa7.16□□□□□ -1.26
FN1-202ENST00000336916 SPEGQ15772 3267 aa7.16□□□□□ -1.26
FN1-202ENST00000336916 ADM2Q7Z4H4 148 aa7.16□□□□□ -1.26
FN1-202ENST00000336916 TENM3Q9P273 2699 aa7.15□□□□□ -1.26
FN1-202ENST00000336916 SZT2Q5T011 3432 aa7.15□□□□□ -1.26
FN1-202ENST00000336916 DMXL1Q9Y485 3027 aa7.13□□□□□ -1.27
FN1-202ENST00000336916 FBN2P35556 2912 aa7.1□□□□□ -1.27
FN1-202ENST00000336916 EYSQ5T1H1 3165 aa7.09□□□□□ -1.27
FN1-202ENST00000336916 A0A087X002 238 aa7.09□□□□□ -1.27
FN1-202ENST00000336916 SPTBN5Q9NRC6 3674 aaKnown RBP7.08□□□□□ -1.28
FN1-202ENST00000336916 KRTAP29-1A8MX34 341 aaPredicted RBP7.07□□□□□ -1.28
FN1-202ENST00000336916 CFAP47Q6ZTR5 3102 aa7.07□□□□□ -1.28
FN1-202ENST00000336916 Q6ZRN7 208 aaPredicted RBP7.04□□□□□ -1.28
FN1-202ENST00000336916 HRNRQ86YZ3 2850 aaPredicted RBP7.03□□□□□ -1.28
FN1-202ENST00000336916 A8MUU9 505 aa7.02□□□□□ -1.29
FN1-202ENST00000336916 NBPF19A0A087WUL8 3843 aa6.99□□□□□ -1.29
FN1-202ENST00000336916 PDZD2O15018 2839 aa6.99□□□□□ -1.29
FN1-202ENST00000336916 SPATA8Q6RVD6 105 aa6.99□□□□□ -1.29
FN1-202ENST00000336916 MXRA5Q9NR99 2828 aa6.97□□□□□ -1.29
FN1-202ENST00000336916 TGP01266 2768 aa6.94□□□□□ -1.3
FN1-202ENST00000336916 C20orf166-AS1Q96NR2 134 aa6.93□□□□□ -1.3
FN1-202ENST00000336916 NOTCH2NLQ7Z3S9 236 aa6.92□□□□□ -1.3
FN1-202ENST00000336916 KRTAP13-1Q8IUC0 172 aa6.92□□□□□ -1.3
FN1-202ENST00000336916 PKD1L1Q8TDX9 2849 aa6.91□□□□□ -1.3
FN1-202ENST00000336916 TNP1P09430 55 aa6.89□□□□□ -1.31
FN1-202ENST00000336916 CYSTM1Q9H1C7 97 aa6.89□□□□□ -1.31
FN1-202ENST00000336916 TENM2Q9NT68 2774 aa6.86□□□□□ -1.31
FN1-202ENST00000336916 PRAC1Q96KF2 57 aa6.86□□□□□ -1.31
FN1-202ENST00000336916 PP632Q6XCG6 107 aa6.85□□□□□ -1.31
FN1-202ENST00000336916 LOC400499M0QZD8 3231 aa6.85□□□□□ -1.31
FN1-202ENST00000336916 VWFP04275 2813 aa6.84□□□□□ -1.31
FN1-202ENST00000336916 KRTAP13-2Q52LG2 175 aa6.82□□□□□ -1.32
FN1-202ENST00000336916 H3BS24 57 aa6.77□□□□□ -1.33
FN1-202ENST00000336916 WDFY3Q8IZQ1 3526 aa6.77□□□□□ -1.33
FN1-202ENST00000336916 KRTAP25-1Q3LHN0 102 aa6.77□□□□□ -1.33
FN1-202ENST00000336916 TPRXLQ17RH7 258 aa6.76□□□□□ -1.33
FN1-202ENST00000336916 PRO2289Q9P1D8 64 aa6.76□□□□□ -1.33
FN1-202ENST00000336916 KRTAP11-1Q8IUC1 163 aa6.75□□□□□ -1.33
FN1-202ENST00000336916 KRTAP16-1A8MUX0 517 aa6.71□□□□□ -1.34
FN1-202ENST00000336916 ZFHX3Q15911 3703 aa6.71□□□□□ -1.34
FN1-202ENST00000336916 MYO15AQ9UKN7 3530 aa6.71□□□□□ -1.34
FN1-202ENST00000336916 KRTAP7-1Q8IUC3 87 aa6.69□□□□□ -1.34
FN1-202ENST00000336916 COL7A1Q02388 2944 aa6.67□□□□□ -1.34
FN1-202ENST00000336916 A6NN06 94 aa6.63□□□□□ -1.35
FN1-202ENST00000336916 XP32Q5T750 250 aa6.61□□□□□ -1.35
FN1-202ENST00000336916 ASPMQ8IZT6 3477 aa6.6□□□□□ -1.35
FN1-202ENST00000336916 LAMA5O15230 3695 aa6.58□□□□□ -1.36
FN1-202ENST00000336916 A8MU10 97 aa6.57□□□□□ -1.36
FN1-202ENST00000336916 ZFHX4Q86UP3 3567 aa6.55□□□□□ -1.36
FN1-202ENST00000336916 KRTAP10-8P60410 259 aa6.54□□□□□ -1.36
FN1-202ENST00000336916 KRTAP1-4P0C5Y4 121 aa6.52□□□□□ -1.37
FN1-202ENST00000336916 C10orf95Q9H7T3 257 aa6.49□□□□□ -1.37
FN1-202ENST00000336916 SPENQ96T58 3664 aaKnown RBP6.48□□□□□ -1.37
FN1-202ENST00000336916 SRRM2Q9UQ35 2752 aaKnown RBP6.48□□□□□ -1.37
FN1-202ENST00000336916 DCHS1Q96JQ0 3298 aa6.43□□□□□ -1.38
FN1-202ENST00000336916 KRTAP10-10P60014 251 aa6.43□□□□□ -1.38
FN1-202ENST00000336916 RELNP78509 3460 aa6.43□□□□□ -1.38
FN1-202ENST00000336916 KRTAP13-3Q3SY46 172 aa6.42□□□□□ -1.38
FN1-202ENST00000336916 FBN1P35555 2871 aaKnown RBP6.42□□□□□ -1.38
FN1-202ENST00000336916 MEGF8Q7Z7M0 2845 aa6.41□□□□□ -1.38
FN1-202ENST00000336916 NDUFAF8A1L188 74 aa6.4□□□□□ -1.39
FN1-202ENST00000336916 DMDP11532 3685 aa6.34□□□□□ -1.39
FN1-202ENST00000336916 H0YAA0 97 aa6.31□□□□□ -1.4
FN1-202ENST00000336916 FBN3Q75N90 2809 aa6.3□□□□□ -1.4
FN1-202ENST00000336916 P0C880 135 aa6.3□□□□□ -1.4
FN1-202ENST00000336916 TRRAPQ9Y4A5 3859 aa6.29□□□□□ -1.4
FN1-202ENST00000336916 SMG1Q96Q15 3661 aaKnown RBP6.26□□□□□ -1.41
FN1-202ENST00000336916 A0A1B0GVY2 172 aa6.24□□□□□ -1.41
FN1-202ENST00000336916 CSMD1Q96PZ7 3565 aa6.23□□□□□ -1.41
FN1-202ENST00000336916 VPS13CQ709C8 3753 aa6.19□□□□□ -1.42
FN1-202ENST00000336916 BSNQ9UPA5 3926 aa6.16□□□□□ -1.42
FN1-202ENST00000336916 OTOGQ6ZRI0 2925 aa6.12□□□□□ -1.43
FN1-202ENST00000336916 KRTAP13-4Q3LI77 160 aa6.09□□□□□ -1.44
FN1-202ENST00000336916 AKAP9Q99996 3911 aa6.08□□□□□ -1.44
FN1-202ENST00000336916 MUC3AQ02505 3323 aa5.97□□□□□ -1.45
FN1-202ENST00000336916 SVEP1Q4LDE5 3571 aa5.96□□□□□ -1.45
FN1-202ENST00000336916 KRTAP12-2P59991 146 aa5.89□□□□□ -1.47
FN1-202ENST00000336916 CUBNO60494 3623 aa5.89□□□□□ -1.47
FN1-202ENST00000336916 KRTAP12-1P59990 96 aa5.87□□□□□ -1.47
FN1-202ENST00000336916 CSMD2Q7Z408 3487 aa5.8□□□□□ -1.48
FN1-202ENST00000336916 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
FN1-202ENST00000336916 ZNF469Q96JG9 3925 aaPredicted RBP5.77□□□□□ -1.49
FN1-202ENST00000336916 CSMD3Q7Z407 3707 aa5.72□□□□□ -1.49
FN1-202ENST00000336916 ALMS1Q8TCU4 4167 aa5.71□□□□□ -1.49
FN1-202ENST00000336916 KRTAP23-1A1A580 65 aa5.66□□□□□ -1.5
FN1-202ENST00000336916 INE1O15225 51 aa5.66□□□□□ -1.5
FN1-202ENST00000336916 KRTAP3-1Q9BYR8 98 aa5.63□□□□□ -1.51
FN1-202ENST00000336916 DNAH1Q9P2D7 4330 aa5.62□□□□□ -1.51
FN1-202ENST00000336916 KRTAP10-12P60413 245 aa5.61□□□□□ -1.51
FN1-202ENST00000336916 ANK3Q12955 4377 aaKnown RBP5.59□□□□□ -1.51
FN1-202ENST00000336916 KRTAP10-6P60371 365 aaPredicted RBP5.58□□□□□ -1.52
FN1-202ENST00000336916 MT1HL1P0DM35 61 aa5.56□□□□□ -1.52
FN1-202ENST00000336916 DNAH7Q8WXX0 4024 aa5.55□□□□□ -1.52
FN1-202ENST00000336916 LYSTQ99698 3801 aa5.55□□□□□ -1.52
FN1-202ENST00000336916 CMYA5Q8N3K9 4069 aa5.52□□□□□ -1.53
FN1-202ENST00000336916 DNAH3Q8TD57 4116 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms