RNA–Protein interactions for RNA: ENST00000336418.8

AP3S2-201, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S2, Length 5,891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-201ENST00000336418 SEC61BP60468 96 aaKnown RBP6.47□□□□□ -1.37
AP3S2-201ENST00000336418 TENM4Q6N022 2769 aa6.46□□□□□ -1.37
AP3S2-201ENST00000336418 HIVEP1P15822 2718 aa6.43□□□□□ -1.38
AP3S2-201ENST00000336418 EYSQ5T1H1 3165 aa6.39□□□□□ -1.39
AP3S2-201ENST00000336418 CFAP47Q6ZTR5 3102 aa6.39□□□□□ -1.39
AP3S2-201ENST00000336418 KRTAP13-2Q52LG2 175 aa6.38□□□□□ -1.39
AP3S2-201ENST00000336418 DNAH14Q0VDD8 3507 aa6.38□□□□□ -1.39
AP3S2-201ENST00000336418 UTP20O75691 2785 aaKnown RBP6.37□□□□□ -1.39
AP3S2-201ENST00000336418 KMT2BQ9UMN6 2715 aaPredicted RBP6.36□□□□□ -1.39
AP3S2-201ENST00000336418 KALRNO60229 2985 aa6.35□□□□□ -1.39
AP3S2-201ENST00000336418 ZZEF1O43149 2961 aa6.34□□□□□ -1.4
AP3S2-201ENST00000336418 H0YAA0 97 aa6.33□□□□□ -1.4
AP3S2-201ENST00000336418 ADGRG4Q8IZF6 3080 aa6.33□□□□□ -1.4
AP3S2-201ENST00000336418 KRTAP13-1Q8IUC0 172 aa6.32□□□□□ -1.4
AP3S2-201ENST00000336418 TNRC18O15417 2968 aaPredicted RBP6.32□□□□□ -1.4
AP3S2-201ENST00000336418 NBEAQ8NFP9 2946 aa6.32□□□□□ -1.4
AP3S2-201ENST00000336418 SPEGQ15772 3267 aa6.3□□□□□ -1.4
AP3S2-201ENST00000336418 ASH1LQ9NR48 2969 aaKnown RBP6.3□□□□□ -1.4
AP3S2-201ENST00000336418 LRBAP50851 2863 aa6.29□□□□□ -1.4
AP3S2-201ENST00000336418 TNP1P09430 55 aa6.27□□□□□ -1.41
AP3S2-201ENST00000336418 Q6ZRN7 208 aaPredicted RBP6.26□□□□□ -1.41
AP3S2-201ENST00000336418 DMXL1Q9Y485 3027 aa6.25□□□□□ -1.41
AP3S2-201ENST00000336418 CELSR2Q9HCU4 2923 aa6.25□□□□□ -1.41
AP3S2-201ENST00000336418 KRTAP10-8P60410 259 aa6.24□□□□□ -1.41
AP3S2-201ENST00000336418 APCP25054 2843 aa6.23□□□□□ -1.41
AP3S2-201ENST00000336418 P0C880 135 aa6.22□□□□□ -1.41
AP3S2-201ENST00000336418 RPS29P62273 56 aaKnown RBP6.21□□□□□ -1.42
AP3S2-201ENST00000336418 SPTBN5Q9NRC6 3674 aaKnown RBP6.2□□□□□ -1.42
AP3S2-201ENST00000336418 KRTAP21-3Q3LHN1 58 aa6.2□□□□□ -1.42
AP3S2-201ENST00000336418 USP34Q70CQ2 3546 aa6.19□□□□□ -1.42
AP3S2-201ENST00000336418 DCHS2Q6V1P9 2916 aa6.16□□□□□ -1.42
AP3S2-201ENST00000336418 NIPBLQ6KC79 2804 aaeCLIP6.14□□□□□ -1.43
AP3S2-201ENST00000336418 ZANQ9Y493 2812 aa6.13□□□□□ -1.43
AP3S2-201ENST00000336418 PP632Q6XCG6 107 aa6.08□□□□□ -1.44
AP3S2-201ENST00000336418 A0A1B0GVY2 172 aa6.07□□□□□ -1.44
AP3S2-201ENST00000336418 MYO15AQ9UKN7 3530 aa6.07□□□□□ -1.44
AP3S2-201ENST00000336418 NF1P21359 2839 aa6.05□□□□□ -1.44
AP3S2-201ENST00000336418 LOC400499M0QZD8 3231 aa6.04□□□□□ -1.44
AP3S2-201ENST00000336418 TENM3Q9P273 2699 aa6.02□□□□□ -1.45
AP3S2-201ENST00000336418 TENM1Q9UKZ4 2725 aa6.02□□□□□ -1.45
AP3S2-201ENST00000336418 PKD1L1Q8TDX9 2849 aa5.99□□□□□ -1.45
AP3S2-201ENST00000336418 TENM2Q9NT68 2774 aa5.98□□□□□ -1.45
AP3S2-201ENST00000336418 DCHS1Q96JQ0 3298 aa5.98□□□□□ -1.45
AP3S2-201ENST00000336418 XP32Q5T750 250 aa5.96□□□□□ -1.46
AP3S2-201ENST00000336418 FBN2P35556 2912 aa5.95□□□□□ -1.46
AP3S2-201ENST00000336418 KRTAP1-4P0C5Y4 121 aa5.95□□□□□ -1.46
AP3S2-201ENST00000336418 KRTAP12-2P59991 146 aa5.94□□□□□ -1.46
AP3S2-201ENST00000336418 TPRXLQ17RH7 258 aa5.92□□□□□ -1.46
AP3S2-201ENST00000336418 RELNP78509 3460 aa5.89□□□□□ -1.47
AP3S2-201ENST00000336418 HRNRQ86YZ3 2850 aaPredicted RBP5.86□□□□□ -1.47
AP3S2-201ENST00000336418 VWFP04275 2813 aa5.85□□□□□ -1.47
AP3S2-201ENST00000336418 MXRA5Q9NR99 2828 aa5.85□□□□□ -1.47
AP3S2-201ENST00000336418 KRTAP13-3Q3SY46 172 aa5.83□□□□□ -1.48
AP3S2-201ENST00000336418 CELSR1Q9NYQ6 3014 aa5.82□□□□□ -1.48
AP3S2-201ENST00000336418 WDFY3Q8IZQ1 3526 aa5.79□□□□□ -1.48
AP3S2-201ENST00000336418 ASPMQ8IZT6 3477 aa5.77□□□□□ -1.49
AP3S2-201ENST00000336418 NBPF19A0A087WUL8 3843 aa5.75□□□□□ -1.49
AP3S2-201ENST00000336418 LAMA5O15230 3695 aa5.75□□□□□ -1.49
AP3S2-201ENST00000336418 ZFHX3Q15911 3703 aa5.75□□□□□ -1.49
AP3S2-201ENST00000336418 KRTAP10-10P60014 251 aa5.73□□□□□ -1.49
AP3S2-201ENST00000336418 KRTAP12-1P59990 96 aa5.72□□□□□ -1.49
AP3S2-201ENST00000336418 SRRM2Q9UQ35 2752 aaKnown RBP5.68□□□□□ -1.5
AP3S2-201ENST00000336418 KRTAP13-4Q3LI77 160 aa5.66□□□□□ -1.5
AP3S2-201ENST00000336418 FBN1P35555 2871 aaKnown RBP5.66□□□□□ -1.5
AP3S2-201ENST00000336418 MUC3AQ02505 3323 aa5.64□□□□□ -1.51
AP3S2-201ENST00000336418 PDZD2O15018 2839 aa5.63□□□□□ -1.51
AP3S2-201ENST00000336418 KRTAP3-1Q9BYR8 98 aa5.63□□□□□ -1.51
AP3S2-201ENST00000336418 TGP01266 2768 aa5.62□□□□□ -1.51
AP3S2-201ENST00000336418 KRTAP15-1Q3LI76 137 aa5.6□□□□□ -1.51
AP3S2-201ENST00000336418 CSMD1Q96PZ7 3565 aa5.59□□□□□ -1.51
AP3S2-201ENST00000336418 ZFHX4Q86UP3 3567 aa5.59□□□□□ -1.51
AP3S2-201ENST00000336418 PRO2289Q9P1D8 64 aa5.58□□□□□ -1.52
AP3S2-201ENST00000336418 DMDP11532 3685 aa5.55□□□□□ -1.52
AP3S2-201ENST00000336418 OTOGQ6ZRI0 2925 aa5.55□□□□□ -1.52
AP3S2-201ENST00000336418 SMG1Q96Q15 3661 aaKnown RBP5.5□□□□□ -1.53
AP3S2-201ENST00000336418 KRTAP10-6P60371 365 aaPredicted RBP5.48□□□□□ -1.53
AP3S2-201ENST00000336418 CSMD2Q7Z408 3487 aa5.47□□□□□ -1.53
AP3S2-201ENST00000336418 INE1O15225 51 aa5.36□□□□□ -1.55
AP3S2-201ENST00000336418 CUBNO60494 3623 aa5.36□□□□□ -1.55
AP3S2-201ENST00000336418 FBN3Q75N90 2809 aa5.31□□□□□ -1.56
AP3S2-201ENST00000336418 SVEP1Q4LDE5 3571 aa5.28□□□□□ -1.56
AP3S2-201ENST00000336418 COL7A1Q02388 2944 aa5.26□□□□□ -1.57
AP3S2-201ENST00000336418 KRTAP3-2Q9BYR7 98 aa5.26□□□□□ -1.57
AP3S2-201ENST00000336418 CRCT1Q9UGL9 99 aa5.25□□□□□ -1.57
AP3S2-201ENST00000336418 TRRAPQ9Y4A5 3859 aa5.23□□□□□ -1.57
AP3S2-201ENST00000336418 KRTAP3-3Q9BYR6 98 aa5.22□□□□□ -1.57
AP3S2-201ENST00000336418 ANK3Q12955 4377 aaKnown RBP5.21□□□□□ -1.58
AP3S2-201ENST00000336418 SPENQ96T58 3664 aaKnown RBP5.2□□□□□ -1.58
AP3S2-201ENST00000336418 KRTAP4-5Q9BYR2 181 aa5.17□□□□□ -1.58
AP3S2-201ENST00000336418 MEGF8Q7Z7M0 2845 aa5.12□□□□□ -1.59
AP3S2-201ENST00000336418 KRTAP10-12P60413 245 aa5.08□□□□□ -1.6
AP3S2-201ENST00000336418 BSNQ9UPA5 3926 aa5.06□□□□□ -1.6
AP3S2-201ENST00000336418 LCE3AQ5TA76 89 aa5.06□□□□□ -1.6
AP3S2-201ENST00000336418 MT1HL1P0DM35 61 aa5.04□□□□□ -1.6
AP3S2-201ENST00000336418 KRTAP12-3P60328 96 aa5□□□□□ -1.61
AP3S2-201ENST00000336418 LORP23490 312 aaPredicted RBP5□□□□□ -1.61
AP3S2-201ENST00000336418 KRTAP10-5P60370 271 aa4.89□□□□□ -1.63
AP3S2-201ENST00000336418 HUWE1Q7Z6Z7 4374 aaKnown RBP4.88□□□□□ -1.63
AP3S2-201ENST00000336418 VPS13CQ709C8 3753 aa4.87□□□□□ -1.63
AP3S2-201ENST00000336418 CSMD3Q7Z407 3707 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms