RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 KRTAP13-1Q8IUC0 172 aa9.89□□□□□ -0.83
TRAPPC11-201ENST00000334690 DMXL1Q9Y485 3027 aa9.88□□□□□ -0.83
TRAPPC11-201ENST00000334690 LUZP6Q538Z0 58 aa9.86□□□□□ -0.83
TRAPPC11-201ENST00000334690 RPL37P61927 97 aaKnown RBP9.85□□□□□ -0.83
TRAPPC11-201ENST00000334690 SEC61BP60468 96 aaKnown RBP9.84□□□□□ -0.83
TRAPPC11-201ENST00000334690 FBN2P35556 2912 aa9.83□□□□□ -0.84
TRAPPC11-201ENST00000334690 TNRC18O15417 2968 aaPredicted RBP9.83□□□□□ -0.84
TRAPPC11-201ENST00000334690 SPEGQ15772 3267 aa9.82□□□□□ -0.84
TRAPPC11-201ENST00000334690 RPS29P62273 56 aaKnown RBP9.82□□□□□ -0.84
TRAPPC11-201ENST00000334690 R4GN34 69 aa9.81□□□□□ -0.84
TRAPPC11-201ENST00000334690 H1FX-AS1Q4G0G2 97 aa9.81□□□□□ -0.84
TRAPPC11-201ENST00000334690 CRYBG3Q68DQ2 2970 aa9.77□□□□□ -0.85
TRAPPC11-201ENST00000334690 LOC400499M0QZD8 3231 aa9.77□□□□□ -0.85
TRAPPC11-201ENST00000334690 SPATA8Q6RVD6 105 aa9.75□□□□□ -0.85
TRAPPC11-201ENST00000334690 KRTAP13-2Q52LG2 175 aa9.72□□□□□ -0.85
TRAPPC11-201ENST00000334690 ROMO1P60602 79 aa9.71□□□□□ -0.85
TRAPPC11-201ENST00000334690 M0R2T5 61 aa9.71□□□□□ -0.86
TRAPPC11-201ENST00000334690 USP34Q70CQ2 3546 aa9.68□□□□□ -0.86
TRAPPC11-201ENST00000334690 MXRA5Q9NR99 2828 aa9.64□□□□□ -0.87
TRAPPC11-201ENST00000334690 TENM3Q9P273 2699 aa9.63□□□□□ -0.87
TRAPPC11-201ENST00000334690 M0QZ58 72 aa9.61□□□□□ -0.87
TRAPPC11-201ENST00000334690 A6NN06 94 aa9.6□□□□□ -0.87
TRAPPC11-201ENST00000334690 SPTBN5Q9NRC6 3674 aaKnown RBP9.59□□□□□ -0.87
TRAPPC11-201ENST00000334690 ADM2Q7Z4H4 148 aa9.56□□□□□ -0.88
TRAPPC11-201ENST00000334690 H3BS24 57 aa9.55□□□□□ -0.88
TRAPPC11-201ENST00000334690 TENM1Q9UKZ4 2725 aa9.48□□□□□ -0.89
TRAPPC11-201ENST00000334690 MYO15AQ9UKN7 3530 aa9.46□□□□□ -0.9
TRAPPC11-201ENST00000334690 CELSR1Q9NYQ6 3014 aa9.43□□□□□ -0.9
TRAPPC11-201ENST00000334690 A8MU10 97 aa9.43□□□□□ -0.9
TRAPPC11-201ENST00000334690 A8MUU9 505 aa9.43□□□□□ -0.9
TRAPPC11-201ENST00000334690 KRTAP21-3Q3LHN1 58 aa9.43□□□□□ -0.9
TRAPPC11-201ENST00000334690 C20orf166-AS1Q96NR2 134 aa9.4□□□□□ -0.9
TRAPPC11-201ENST00000334690 A0A0A0MQY5 61 aa9.39□□□□□ -0.91
TRAPPC11-201ENST00000334690 KRTAP25-1Q3LHN0 102 aa9.37□□□□□ -0.91
TRAPPC11-201ENST00000334690 KRTAP1-4P0C5Y4 121 aa9.34□□□□□ -0.91
TRAPPC11-201ENST00000334690 DCHS1Q96JQ0 3298 aa9.29□□□□□ -0.92
TRAPPC11-201ENST00000334690 PLAC4Q8WY50 150 aa9.26□□□□□ -0.93
TRAPPC11-201ENST00000334690 PDZD2O15018 2839 aa9.24□□□□□ -0.93
TRAPPC11-201ENST00000334690 PKD1L1Q8TDX9 2849 aa9.22□□□□□ -0.93
TRAPPC11-201ENST00000334690 RELNP78509 3460 aa9.2□□□□□ -0.94
TRAPPC11-201ENST00000334690 TENM2Q9NT68 2774 aa9.2□□□□□ -0.94
TRAPPC11-201ENST00000334690 TGP01266 2768 aa9.19□□□□□ -0.94
TRAPPC11-201ENST00000334690 KRTAP16-1A8MUX0 517 aa9.13□□□□□ -0.95
TRAPPC11-201ENST00000334690 XP32Q5T750 250 aa9.08□□□□□ -0.96
TRAPPC11-201ENST00000334690 WDFY3Q8IZQ1 3526 aa9.06□□□□□ -0.96
TRAPPC11-201ENST00000334690 FBN1P35555 2871 aaKnown RBP9.05□□□□□ -0.96
TRAPPC11-201ENST00000334690 VWFP04275 2813 aa9.04□□□□□ -0.96
TRAPPC11-201ENST00000334690 H0YAA0 97 aa8.98□□□□□ -0.97
TRAPPC11-201ENST00000334690 KRTAP13-3Q3SY46 172 aa8.95□□□□□ -0.98
TRAPPC11-201ENST00000334690 TNP1P09430 55 aa8.94□□□□□ -0.98
TRAPPC11-201ENST00000334690 NDUFAF8A1L188 74 aa8.94□□□□□ -0.98
TRAPPC11-201ENST00000334690 TPRXLQ17RH7 258 aa8.92□□□□□ -0.98
TRAPPC11-201ENST00000334690 OTOGQ6ZRI0 2925 aa8.91□□□□□ -0.98
TRAPPC11-201ENST00000334690 LAMA5O15230 3695 aa8.89□□□□□ -0.99
TRAPPC11-201ENST00000334690 PP632Q6XCG6 107 aa8.83□□□□□ -1
TRAPPC11-201ENST00000334690 ASPMQ8IZT6 3477 aa8.82□□□□□ -1
TRAPPC11-201ENST00000334690 ZFHX4Q86UP3 3567 aa8.81□□□□□ -1
TRAPPC11-201ENST00000334690 MUC3AQ02505 3323 aa8.77□□□□□ -1.01
TRAPPC11-201ENST00000334690 SRRM2Q9UQ35 2752 aaKnown RBP8.77□□□□□ -1.01
TRAPPC11-201ENST00000334690 C10orf95Q9H7T3 257 aa8.76□□□□□ -1.01
TRAPPC11-201ENST00000334690 KRTAP10-8P60410 259 aa8.75□□□□□ -1.01
TRAPPC11-201ENST00000334690 P0C880 135 aa8.74□□□□□ -1.01
TRAPPC11-201ENST00000334690 A0A1B0GVY2 172 aa8.7□□□□□ -1.02
TRAPPC11-201ENST00000334690 FBN3Q75N90 2809 aa8.69□□□□□ -1.02
TRAPPC11-201ENST00000334690 CSMD1Q96PZ7 3565 aa8.65□□□□□ -1.02
TRAPPC11-201ENST00000334690 SMG1Q96Q15 3661 aaKnown RBP8.57□□□□□ -1.04
TRAPPC11-201ENST00000334690 DMDP11532 3685 aa8.56□□□□□ -1.04
TRAPPC11-201ENST00000334690 ZFHX3Q15911 3703 aa8.53□□□□□ -1.04
TRAPPC11-201ENST00000334690 NBPF19A0A087WUL8 3843 aa8.53□□□□□ -1.04
TRAPPC11-201ENST00000334690 MEGF8Q7Z7M0 2845 aa8.52□□□□□ -1.05
TRAPPC11-201ENST00000334690 COL7A1Q02388 2944 aa8.47□□□□□ -1.05
TRAPPC11-201ENST00000334690 KRTAP3-1Q9BYR8 98 aa8.44□□□□□ -1.06
TRAPPC11-201ENST00000334690 KRTAP10-10P60014 251 aa8.44□□□□□ -1.06
TRAPPC11-201ENST00000334690 SVEP1Q4LDE5 3571 aa8.39□□□□□ -1.07
TRAPPC11-201ENST00000334690 KRTAP12-2P59991 146 aa8.37□□□□□ -1.07
TRAPPC11-201ENST00000334690 CUBNO60494 3623 aa8.37□□□□□ -1.07
TRAPPC11-201ENST00000334690 CSMD2Q7Z408 3487 aa8.34□□□□□ -1.07
TRAPPC11-201ENST00000334690 KRTAP12-1P59990 96 aa8.32□□□□□ -1.08
TRAPPC11-201ENST00000334690 PRO2289Q9P1D8 64 aa8.31□□□□□ -1.08
TRAPPC11-201ENST00000334690 ANK3Q12955 4377 aaKnown RBP8.29□□□□□ -1.08
TRAPPC11-201ENST00000334690 TRRAPQ9Y4A5 3859 aa8.25□□□□□ -1.09
TRAPPC11-201ENST00000334690 KRTAP13-4Q3LI77 160 aa8.22□□□□□ -1.09
TRAPPC11-201ENST00000334690 KRTAP10-6P60371 365 aaPredicted RBP8.21□□□□□ -1.09
TRAPPC11-201ENST00000334690 SPENQ96T58 3664 aaKnown RBP8.18□□□□□ -1.1
TRAPPC11-201ENST00000334690 MT1HL1P0DM35 61 aa8.04□□□□□ -1.12
TRAPPC11-201ENST00000334690 KRTAP10-4P60372 401 aaPredicted RBP7.96□□□□□ -1.13
TRAPPC11-201ENST00000334690 BSNQ9UPA5 3926 aa7.96□□□□□ -1.13
TRAPPC11-201ENST00000334690 KRTAP3-2Q9BYR7 98 aa7.95□□□□□ -1.14
TRAPPC11-201ENST00000334690 KRTAP3-3Q9BYR6 98 aa7.94□□□□□ -1.14
TRAPPC11-201ENST00000334690 HUWE1Q7Z6Z7 4374 aaKnown RBP7.77□□□□□ -1.17
TRAPPC11-201ENST00000334690 VPS13CQ709C8 3753 aa7.71□□□□□ -1.17
TRAPPC11-201ENST00000334690 KRTAP15-1Q3LI76 137 aa7.66□□□□□ -1.18
TRAPPC11-201ENST00000334690 KRTAP4-5Q9BYR2 181 aa7.6□□□□□ -1.19
TRAPPC11-201ENST00000334690 ZNF469Q96JG9 3925 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC11-201ENST00000334690 KRTAP23-1A1A580 65 aa7.45□□□□□ -1.22
TRAPPC11-201ENST00000334690 DNAH9Q9NYC9 4486 aa7.45□□□□□ -1.22
TRAPPC11-201ENST00000334690 KRTAP10-12P60413 245 aa7.45□□□□□ -1.22
TRAPPC11-201ENST00000334690 CSMD3Q7Z407 3707 aa7.45□□□□□ -1.22
TRAPPC11-201ENST00000334690 DNAH5Q8TE73 4624 aa7.44□□□□□ -1.22
TRAPPC11-201ENST00000334690 LORP23490 312 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms