RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 LINC00483Q53H64 154 aa9.75□□□□□ -0.85
UPK3B-202ENST00000334348 PANO1I0J062 215 aa9.72□□□□□ -0.85
UPK3B-202ENST00000334348 A0A087X002 238 aa9.71□□□□□ -0.86
UPK3B-202ENST00000334348 NOTCH2NLQ7Z3S9 236 aa9.71□□□□□ -0.86
UPK3B-202ENST00000334348 PRR26Q8N8Z3 221 aa9.7□□□□□ -0.86
UPK3B-202ENST00000334348 UBE2DNLQ8IWF7 75 aa9.69□□□□□ -0.86
UPK3B-202ENST00000334348 DYNC2H1Q8NCM8 4307 aaKnown RBP9.69□□□□□ -0.86
UPK3B-202ENST00000334348 WWC2-AS2Q96NR7 200 aa9.67□□□□□ -0.86
UPK3B-202ENST00000334348 ZNF706Q9Y5V0 76 aaPredicted RBP9.67□□□□□ -0.86
UPK3B-202ENST00000334348 KRTAP13-3Q3SY46 172 aa9.66□□□□□ -0.86
UPK3B-202ENST00000334348 ACYP2P14621 99 aa9.65□□□□□ -0.87
UPK3B-202ENST00000334348 Q5W150 140 aa9.65□□□□□ -0.87
UPK3B-202ENST00000334348 APLNQ9ULZ1 77 aa9.63□□□□□ -0.87
UPK3B-202ENST00000334348 SPACA4Q8TDM5 124 aa9.63□□□□□ -0.87
UPK3B-202ENST00000334348 KMT2CQ8NEZ4 4911 aaKnown RBP9.62□□□□□ -0.87
UPK3B-202ENST00000334348 KMT2AQ03164 3969 aa9.61□□□□□ -0.87
UPK3B-202ENST00000334348 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.61□□□□□ -0.87
UPK3B-202ENST00000334348 LINC00313P59037 77 aa9.59□□□□□ -0.87
UPK3B-202ENST00000334348 HYDINQ4G0P3 5121 aa9.58□□□□□ -0.88
UPK3B-202ENST00000334348 ANAPC11Q9NYG5 84 aa9.57□□□□□ -0.88
UPK3B-202ENST00000334348 Q6ZRN7 208 aaPredicted RBP9.56□□□□□ -0.88
UPK3B-202ENST00000334348 DMAC1Q96GE9 116 aa9.56□□□□□ -0.88
UPK3B-202ENST00000334348 NBDYA0A0U1RRE5 68 aa9.55□□□□□ -0.88
UPK3B-202ENST00000334348 IGLV5-52A0A0A0MRZ9 124 aa9.53□□□□□ -0.88
UPK3B-202ENST00000334348 SPINK6Q6UWN8 80 aa9.53□□□□□ -0.88
UPK3B-202ENST00000334348 PSORS1C2Q9UIG4 136 aa9.53□□□□□ -0.88
UPK3B-202ENST00000334348 PLA2G1BP04054 148 aaKnown RBP9.53□□□□□ -0.88
UPK3B-202ENST00000334348 ZNF861PO60384 105 aa9.52□□□□□ -0.88
UPK3B-202ENST00000334348 ALMS1Q8TCU4 4167 aa9.52□□□□□ -0.89
UPK3B-202ENST00000334348 PRAC1Q96KF2 57 aa9.51□□□□□ -0.89
UPK3B-202ENST00000334348 A0A1B0GU69 56 aa9.5□□□□□ -0.89
UPK3B-202ENST00000334348 VPS13DQ5THJ4 4388 aa9.5□□□□□ -0.89
UPK3B-202ENST00000334348 SACSQ9NZJ4 4579 aa9.5□□□□□ -0.89
UPK3B-202ENST00000334348 C8orf87E5RJ46 101 aa9.5□□□□□ -0.89
UPK3B-202ENST00000334348 SPATA8Q6RVD6 105 aa9.5□□□□□ -0.89
UPK3B-202ENST00000334348 NUPR2A6NF83 97 aa9.49□□□□□ -0.89
UPK3B-202ENST00000334348 ADM2Q7Z4H4 148 aa9.45□□□□□ -0.9
UPK3B-202ENST00000334348 RYR3Q15413 4870 aa9.45□□□□□ -0.9
UPK3B-202ENST00000334348 DNAH2Q9P225 4427 aa9.45□□□□□ -0.9
UPK3B-202ENST00000334348 FAM229AH3BQW9 127 aa9.44□□□□□ -0.9
UPK3B-202ENST00000334348 RTL8CO15255 209 aa9.44□□□□□ -0.9
UPK3B-202ENST00000334348 CIRBP-AS1Q8TBR5 109 aa9.42□□□□□ -0.9
UPK3B-202ENST00000334348 FRAS1Q86XX4 4008 aa9.41□□□□□ -0.9
UPK3B-202ENST00000334348 IGKV2-30P06310 120 aa9.41□□□□□ -0.9
UPK3B-202ENST00000334348 A0A087WTM6 91 aa9.41□□□□□ -0.9
UPK3B-202ENST00000334348 MIR22HGQ0VDD5 57 aa9.4□□□□□ -0.9
UPK3B-202ENST00000334348 UQCR11O14957 56 aa9.39□□□□□ -0.91
UPK3B-202ENST00000334348 RYR2Q92736 4967 aa9.39□□□□□ -0.91
UPK3B-202ENST00000334348 LINC01554Q52M75 96 aa9.38□□□□□ -0.91
UPK3B-202ENST00000334348 DNAH8Q96JB1 4490 aa9.37□□□□□ -0.91
UPK3B-202ENST00000334348 SSBP3-AS1Q7Z2R9 100 aa9.37□□□□□ -0.91
UPK3B-202ENST00000334348 RETNLBQ9BQ08 111 aa9.35□□□□□ -0.91
UPK3B-202ENST00000334348 IGLV7-43P04211 117 aa9.35□□□□□ -0.91
UPK3B-202ENST00000334348 LY6G6CO95867 125 aa9.34□□□□□ -0.91
UPK3B-202ENST00000334348 KRTAP16-1A8MUX0 517 aa9.27□□□□□ -0.93
UPK3B-202ENST00000334348 HECTD4Q9Y4D8 3996 aa9.26□□□□□ -0.93
UPK3B-202ENST00000334348 DNAH6Q9C0G6 4158 aa9.26□□□□□ -0.93
UPK3B-202ENST00000334348 FAT2Q9NYQ8 4349 aa9.25□□□□□ -0.93
UPK3B-202ENST00000334348 C4orf48Q5BLP8 95 aa9.24□□□□□ -0.93
UPK3B-202ENST00000334348 IGKV2D-30A0A075B6S6 120 aa9.21□□□□□ -0.93
UPK3B-202ENST00000334348 DNAH17Q9UFH2 4485 aa9.2□□□□□ -0.94
UPK3B-202ENST00000334348 CSAG1Q6PB30 78 aa9.2□□□□□ -0.94
UPK3B-202ENST00000334348 PKHD1P08F94 4074 aa9.18□□□□□ -0.94
UPK3B-202ENST00000334348 PKD1P98161 4303 aa9.17□□□□□ -0.94
UPK3B-202ENST00000334348 KRTAP13-2Q52LG2 175 aa9.16□□□□□ -0.94
UPK3B-202ENST00000334348 DNAH11Q96DT5 4516 aa9.16□□□□□ -0.94
UPK3B-202ENST00000334348 EPPK1P58107 5090 aaKnown RBP9.12□□□□□ -0.95
UPK3B-202ENST00000334348 C1orf134Q5TEV5 83 aa9.1□□□□□ -0.95
UPK3B-202ENST00000334348 DNAH5Q8TE73 4624 aa9.09□□□□□ -0.95
UPK3B-202ENST00000334348 SPINK1P00995 79 aa9.07□□□□□ -0.96
UPK3B-202ENST00000334348 Q8N1X5 172 aa9.02□□□□□ -0.96
UPK3B-202ENST00000334348 H3BS24 57 aa9.01□□□□□ -0.97
UPK3B-202ENST00000334348 Q6ZSA8 131 aa9□□□□□ -0.97
UPK3B-202ENST00000334348 A8MUU9 505 aa8.99□□□□□ -0.97
UPK3B-202ENST00000334348 H0YAA0 97 aa8.99□□□□□ -0.97
UPK3B-202ENST00000334348 KRTAP1-4P0C5Y4 121 aa8.98□□□□□ -0.97
UPK3B-202ENST00000334348 LRP1BQ9NZR2 4599 aa8.96□□□□□ -0.97
UPK3B-202ENST00000334348 DYNC1H1Q14204 4646 aaKnown RBP8.95□□□□□ -0.98
UPK3B-202ENST00000334348 KRTAP10-2P60368 255 aa8.93□□□□□ -0.98
UPK3B-202ENST00000334348 KRTAP25-1Q3LHN0 102 aa8.93□□□□□ -0.98
UPK3B-202ENST00000334348 LINC00304Q8N9R0 145 aa8.92□□□□□ -0.98
UPK3B-202ENST00000334348 TYMSOSQ8TAI1 123 aa8.9□□□□□ -0.98
UPK3B-202ENST00000334348 A0A1B0GU33 70 aa8.89□□□□□ -0.99
UPK3B-202ENST00000334348 A0A1B0GVY2 172 aa8.86□□□□□ -0.99
UPK3B-202ENST00000334348 KIAA1109Q2LD37 5005 aa8.85□□□□□ -0.99
UPK3B-202ENST00000334348 H1FX-AS1Q4G0G2 97 aa8.85□□□□□ -0.99
UPK3B-202ENST00000334348 APOBP04114 4563 aaKnown RBP8.83□□□□□ -1
UPK3B-202ENST00000334348 KRTAP10-1P60331 282 aa8.83□□□□□ -1
UPK3B-202ENST00000334348 KRTAP3-1Q9BYR8 98 aa8.8□□□□□ -1
UPK3B-202ENST00000334348 ROMO1P60602 79 aa8.79□□□□□ -1
UPK3B-202ENST00000334348 RPS29P62273 56 aaKnown RBP8.78□□□□□ -1
UPK3B-202ENST00000334348 FAT1Q14517 4588 aa8.78□□□□□ -1
UPK3B-202ENST00000334348 HSPG2P98160 4391 aa8.75□□□□□ -1.01
UPK3B-202ENST00000334348 RYR1P21817 5038 aa8.74□□□□□ -1.01
UPK3B-202ENST00000334348 C20orf166-AS1Q96NR2 134 aa8.73□□□□□ -1.01
UPK3B-202ENST00000334348 BIRC6Q9NR09 4857 aa8.72□□□□□ -1.01
UPK3B-202ENST00000334348 VPS13BQ7Z7G8 4022 aa8.72□□□□□ -1.01
UPK3B-202ENST00000334348 K7ERS5 55 aa8.71□□□□□ -1.02
UPK3B-202ENST00000334348 COX6B2Q6YFQ2 88 aa8.66□□□□□ -1.02
UPK3B-202ENST00000334348 C9orf92A6NGG3 77 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms