RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 KRTAP1-4P0C5Y4 121 aa8.46□□□□□ -1.05
SMAD3-201ENST00000327367 DMXL2Q8TDJ6 3036 aa8.46□□□□□ -1.05
SMAD3-201ENST00000327367 SZT2Q5T011 3432 aa8.46□□□□□ -1.06
SMAD3-201ENST00000327367 KRTAP12-2P59991 146 aa8.45□□□□□ -1.06
SMAD3-201ENST00000327367 UBR5O95071 2799 aaPredicted RBP8.45□□□□□ -1.06
SMAD3-201ENST00000327367 COL6A3P12111 3177 aa8.45□□□□□ -1.06
SMAD3-201ENST00000327367 CFAP47Q6ZTR5 3102 aa8.45□□□□□ -1.06
SMAD3-201ENST00000327367 VCANP13611 3396 aa8.41□□□□□ -1.06
SMAD3-201ENST00000327367 NBEAQ8NFP9 2946 aa8.4□□□□□ -1.07
SMAD3-201ENST00000327367 LRBAP50851 2863 aa8.38□□□□□ -1.07
SMAD3-201ENST00000327367 TPRXLQ17RH7 258 aa8.38□□□□□ -1.07
SMAD3-201ENST00000327367 KRTAP10-10P60014 251 aa8.35□□□□□ -1.07
SMAD3-201ENST00000327367 HIVEP1P15822 2718 aa8.34□□□□□ -1.07
SMAD3-201ENST00000327367 ZNF292O60281 2723 aa8.34□□□□□ -1.08
SMAD3-201ENST00000327367 COL12A1Q99715 3063 aa8.25□□□□□ -1.09
SMAD3-201ENST00000327367 LAMA1P25391 3075 aa8.25□□□□□ -1.09
SMAD3-201ENST00000327367 TACC2O95359 2948 aa8.23□□□□□ -1.09
SMAD3-201ENST00000327367 IGSF10Q6WRI0 2623 aa8.23□□□□□ -1.09
SMAD3-201ENST00000327367 UTP20O75691 2785 aaKnown RBP8.23□□□□□ -1.09
SMAD3-201ENST00000327367 KMT2BQ9UMN6 2715 aaPredicted RBP8.21□□□□□ -1.1
SMAD3-201ENST00000327367 ITPR2Q14571 2701 aa8.2□□□□□ -1.1
SMAD3-201ENST00000327367 CRYBG3Q68DQ2 2970 aa8.2□□□□□ -1.1
SMAD3-201ENST00000327367 KRTAP13-3Q3SY46 172 aa8.19□□□□□ -1.1
SMAD3-201ENST00000327367 ZZEF1O43149 2961 aa8.17□□□□□ -1.1
SMAD3-201ENST00000327367 BOD1L1Q8NFC6 3051 aa8.17□□□□□ -1.1
SMAD3-201ENST00000327367 SPEGQ15772 3267 aa8.16□□□□□ -1.1
SMAD3-201ENST00000327367 PRO2289Q9P1D8 64 aa8.16□□□□□ -1.1
SMAD3-201ENST00000327367 ADGRG4Q8IZF6 3080 aa8.15□□□□□ -1.1
SMAD3-201ENST00000327367 FRYLO94915 3013 aa8.15□□□□□ -1.1
SMAD3-201ENST00000327367 KRTAP12-1P59990 96 aa8.15□□□□□ -1.11
SMAD3-201ENST00000327367 KRTAP13-4Q3LI77 160 aa8.12□□□□□ -1.11
SMAD3-201ENST00000327367 ATMQ13315 3056 aa8.12□□□□□ -1.11
SMAD3-201ENST00000327367 EYSQ5T1H1 3165 aa8.1□□□□□ -1.11
SMAD3-201ENST00000327367 SPTBN5Q9NRC6 3674 aaKnown RBP8.07□□□□□ -1.12
SMAD3-201ENST00000327367 TGP01266 2768 aa8.01□□□□□ -1.13
SMAD3-201ENST00000327367 CELSR2Q9HCU4 2923 aa8□□□□□ -1.13
SMAD3-201ENST00000327367 KRTAP15-1Q3LI76 137 aa7.96□□□□□ -1.14
SMAD3-201ENST00000327367 MYO15AQ9UKN7 3530 aa7.95□□□□□ -1.14
SMAD3-201ENST00000327367 KRTAP3-1Q9BYR8 98 aa7.93□□□□□ -1.14
SMAD3-201ENST00000327367 USP34Q70CQ2 3546 aa7.91□□□□□ -1.14
SMAD3-201ENST00000327367 DCHS1Q96JQ0 3298 aa7.9□□□□□ -1.14
SMAD3-201ENST00000327367 DMXL1Q9Y485 3027 aa7.87□□□□□ -1.15
SMAD3-201ENST00000327367 DCHS2Q6V1P9 2916 aa7.84□□□□□ -1.15
SMAD3-201ENST00000327367 TNRC18O15417 2968 aaPredicted RBP7.83□□□□□ -1.16
SMAD3-201ENST00000327367 LOC400499M0QZD8 3231 aa7.76□□□□□ -1.17
SMAD3-201ENST00000327367 KRTAP10-6P60371 365 aaPredicted RBP7.75□□□□□ -1.17
SMAD3-201ENST00000327367 WDFY3Q8IZQ1 3526 aa7.72□□□□□ -1.17
SMAD3-201ENST00000327367 INE1O15225 51 aa7.71□□□□□ -1.17
SMAD3-201ENST00000327367 CSMD1Q96PZ7 3565 aa7.7□□□□□ -1.18
SMAD3-201ENST00000327367 NF1P21359 2839 aa7.69□□□□□ -1.18
SMAD3-201ENST00000327367 CELSR1Q9NYQ6 3014 aa7.67□□□□□ -1.18
SMAD3-201ENST00000327367 ASPMQ8IZT6 3477 aa7.67□□□□□ -1.18
SMAD3-201ENST00000327367 CRCT1Q9UGL9 99 aa7.66□□□□□ -1.18
SMAD3-201ENST00000327367 FBN2P35556 2912 aa7.65□□□□□ -1.18
SMAD3-201ENST00000327367 TENM4Q6N022 2769 aa7.65□□□□□ -1.18
SMAD3-201ENST00000327367 NIPBLQ6KC79 2804 aaeCLIP7.65□□□□□ -1.19
SMAD3-201ENST00000327367 FLNCQ14315 2725 aa7.62□□□□□ -1.19
SMAD3-201ENST00000327367 TENM1Q9UKZ4 2725 aa7.59□□□□□ -1.19
SMAD3-201ENST00000327367 ZANQ9Y493 2812 aa7.58□□□□□ -1.2
SMAD3-201ENST00000327367 HRNRQ86YZ3 2850 aaPredicted RBP7.57□□□□□ -1.2
SMAD3-201ENST00000327367 ZFHX4Q86UP3 3567 aa7.57□□□□□ -1.2
SMAD3-201ENST00000327367 TENM3Q9P273 2699 aa7.55□□□□□ -1.2
SMAD3-201ENST00000327367 TENM2Q9NT68 2774 aa7.52□□□□□ -1.21
SMAD3-201ENST00000327367 RELNP78509 3460 aa7.5□□□□□ -1.21
SMAD3-201ENST00000327367 PDZD2O15018 2839 aa7.45□□□□□ -1.22
SMAD3-201ENST00000327367 LAMA5O15230 3695 aa7.42□□□□□ -1.22
SMAD3-201ENST00000327367 KRTAP3-2Q9BYR7 98 aa7.41□□□□□ -1.22
SMAD3-201ENST00000327367 KRTAP21-3Q3LHN1 58 aa7.37□□□□□ -1.23
SMAD3-201ENST00000327367 MXRA5Q9NR99 2828 aa7.37□□□□□ -1.23
SMAD3-201ENST00000327367 KRTAP3-3Q9BYR6 98 aa7.36□□□□□ -1.23
SMAD3-201ENST00000327367 KRTAP10-12P60413 245 aa7.33□□□□□ -1.24
SMAD3-201ENST00000327367 NBPF19A0A087WUL8 3843 aa7.33□□□□□ -1.24
SMAD3-201ENST00000327367 DMDP11532 3685 aa7.3□□□□□ -1.24
SMAD3-201ENST00000327367 VWFP04275 2813 aa7.3□□□□□ -1.24
SMAD3-201ENST00000327367 SMG1Q96Q15 3661 aaKnown RBP7.27□□□□□ -1.25
SMAD3-201ENST00000327367 PKD1L1Q8TDX9 2849 aa7.24□□□□□ -1.25
SMAD3-201ENST00000327367 LCE3AQ5TA76 89 aa7.23□□□□□ -1.25
SMAD3-201ENST00000327367 SRRM2Q9UQ35 2752 aaKnown RBP7.23□□□□□ -1.25
SMAD3-201ENST00000327367 KRTAP12-3P60328 96 aa7.2□□□□□ -1.26
SMAD3-201ENST00000327367 SVEP1Q4LDE5 3571 aa7.18□□□□□ -1.26
SMAD3-201ENST00000327367 CUBNO60494 3623 aa7.18□□□□□ -1.26
SMAD3-201ENST00000327367 MUC3AQ02505 3323 aa7.15□□□□□ -1.27
SMAD3-201ENST00000327367 ZFHX3Q15911 3703 aa7.14□□□□□ -1.27
SMAD3-201ENST00000327367 KRTAP10-5P60370 271 aa7.1□□□□□ -1.27
SMAD3-201ENST00000327367 MEGF8Q7Z7M0 2845 aa7.07□□□□□ -1.28
SMAD3-201ENST00000327367 LORP23490 312 aaPredicted RBP7.06□□□□□ -1.28
SMAD3-201ENST00000327367 SPENQ96T58 3664 aaKnown RBP7.01□□□□□ -1.29
SMAD3-201ENST00000327367 FBN3Q75N90 2809 aa7.01□□□□□ -1.29
SMAD3-201ENST00000327367 CSMD2Q7Z408 3487 aa6.96□□□□□ -1.3
SMAD3-201ENST00000327367 MT1HL1P0DM35 61 aa6.91□□□□□ -1.3
SMAD3-201ENST00000327367 ANK3Q12955 4377 aaKnown RBP6.87□□□□□ -1.31
SMAD3-201ENST00000327367 KRTAP23-1A1A580 65 aa6.86□□□□□ -1.31
SMAD3-201ENST00000327367 COL7A1Q02388 2944 aa6.8□□□□□ -1.32
SMAD3-201ENST00000327367 FBN1P35555 2871 aaKnown RBP6.77□□□□□ -1.33
SMAD3-201ENST00000327367 CSMD3Q7Z407 3707 aa6.76□□□□□ -1.33
SMAD3-201ENST00000327367 TRRAPQ9Y4A5 3859 aa6.73□□□□□ -1.33
SMAD3-201ENST00000327367 HUWE1Q7Z6Z7 4374 aaKnown RBP6.72□□□□□ -1.33
SMAD3-201ENST00000327367 KRTAP4-5Q9BYR2 181 aa6.71□□□□□ -1.33
SMAD3-201ENST00000327367 VPS13CQ709C8 3753 aa6.66□□□□□ -1.34
SMAD3-201ENST00000327367 OTOGQ6ZRI0 2925 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms