RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 PRO2289Q9P1D8 64 aa7.49□□□□□ -1.21
NUP98-201ENST00000324932 VPS13AQ96RL7 3174 aa7.48□□□□□ -1.21
NUP98-201ENST00000324932 APCP25054 2843 aa7.46□□□□□ -1.22
NUP98-201ENST00000324932 TENM4Q6N022 2769 aa7.43□□□□□ -1.22
NUP98-201ENST00000324932 ATMQ13315 3056 aa7.43□□□□□ -1.22
NUP98-201ENST00000324932 KRTAP10-10P60014 251 aa7.43□□□□□ -1.22
NUP98-201ENST00000324932 NBEAQ8NFP9 2946 aa7.42□□□□□ -1.22
NUP98-201ENST00000324932 REV3LO60673 3130 aa7.4□□□□□ -1.22
NUP98-201ENST00000324932 CDH23Q9H251 3354 aa7.4□□□□□ -1.22
NUP98-201ENST00000324932 UTP20O75691 2785 aaKnown RBP7.4□□□□□ -1.23
NUP98-201ENST00000324932 DMXL2Q8TDJ6 3036 aa7.39□□□□□ -1.23
NUP98-201ENST00000324932 KRTAP13-3Q3SY46 172 aa7.39□□□□□ -1.23
NUP98-201ENST00000324932 TNRC18O15417 2968 aaPredicted RBP7.39□□□□□ -1.23
NUP98-201ENST00000324932 KRTAP21-3Q3LHN1 58 aa7.37□□□□□ -1.23
NUP98-201ENST00000324932 SPTBN5Q9NRC6 3674 aaKnown RBP7.36□□□□□ -1.23
NUP98-201ENST00000324932 COL12A1Q99715 3063 aa7.36□□□□□ -1.23
NUP98-201ENST00000324932 UNC80Q8N2C7 3258 aa7.35□□□□□ -1.23
NUP98-201ENST00000324932 ASH1LQ9NR48 2969 aaKnown RBP7.35□□□□□ -1.23
NUP98-201ENST00000324932 KALRNO60229 2985 aa7.33□□□□□ -1.24
NUP98-201ENST00000324932 SZT2Q5T011 3432 aa7.31□□□□□ -1.24
NUP98-201ENST00000324932 XIRP2A4UGR9 3374 aa7.31□□□□□ -1.24
NUP98-201ENST00000324932 KRTAP12-2P59991 146 aa7.3□□□□□ -1.24
NUP98-201ENST00000324932 CELSR2Q9HCU4 2923 aa7.3□□□□□ -1.24
NUP98-201ENST00000324932 KRTAP13-4Q3LI77 160 aa7.28□□□□□ -1.24
NUP98-201ENST00000324932 ADGRG4Q8IZF6 3080 aa7.27□□□□□ -1.25
NUP98-201ENST00000324932 FRYLO94915 3013 aa7.27□□□□□ -1.25
NUP98-201ENST00000324932 TENM3Q9P273 2699 aa7.26□□□□□ -1.25
NUP98-201ENST00000324932 FREM2Q5SZK8 3169 aa7.26□□□□□ -1.25
NUP98-201ENST00000324932 ZANQ9Y493 2812 aa7.25□□□□□ -1.25
NUP98-201ENST00000324932 ZZEF1O43149 2961 aa7.24□□□□□ -1.25
NUP98-201ENST00000324932 LAMA1P25391 3075 aa7.21□□□□□ -1.25
NUP98-201ENST00000324932 DCHS2Q6V1P9 2916 aa7.2□□□□□ -1.26
NUP98-201ENST00000324932 KRTAP12-1P59990 96 aa7.19□□□□□ -1.26
NUP98-201ENST00000324932 BOD1L1Q8NFC6 3051 aa7.19□□□□□ -1.26
NUP98-201ENST00000324932 EYSQ5T1H1 3165 aa7.18□□□□□ -1.26
NUP98-201ENST00000324932 LRBAP50851 2863 aa7.15□□□□□ -1.26
NUP98-201ENST00000324932 TGP01266 2768 aa7.11□□□□□ -1.27
NUP98-201ENST00000324932 NF1P21359 2839 aa7.08□□□□□ -1.28
NUP98-201ENST00000324932 DNAH14Q0VDD8 3507 aa7.04□□□□□ -1.28
NUP98-201ENST00000324932 USP34Q70CQ2 3546 aa7.03□□□□□ -1.28
NUP98-201ENST00000324932 KRTAP3-1Q9BYR8 98 aa7□□□□□ -1.29
NUP98-201ENST00000324932 KRTAP15-1Q3LI76 137 aa6.98□□□□□ -1.29
NUP98-201ENST00000324932 COL6A3P12111 3177 aa6.96□□□□□ -1.29
NUP98-201ENST00000324932 CELSR3Q9NYQ7 3312 aa6.96□□□□□ -1.3
NUP98-201ENST00000324932 TENM1Q9UKZ4 2725 aa6.95□□□□□ -1.3
NUP98-201ENST00000324932 CRYBG3Q68DQ2 2970 aa6.95□□□□□ -1.3
NUP98-201ENST00000324932 VCANP13611 3396 aa6.94□□□□□ -1.3
NUP98-201ENST00000324932 INE1O15225 51 aa6.94□□□□□ -1.3
NUP98-201ENST00000324932 FBN2P35556 2912 aa6.94□□□□□ -1.3
NUP98-201ENST00000324932 CFAP47Q6ZTR5 3102 aa6.9□□□□□ -1.3
NUP98-201ENST00000324932 KRTAP10-6P60371 365 aaPredicted RBP6.9□□□□□ -1.31
NUP98-201ENST00000324932 DMDP11532 3685 aa6.88□□□□□ -1.31
NUP98-201ENST00000324932 HRNRQ86YZ3 2850 aaPredicted RBP6.88□□□□□ -1.31
NUP98-201ENST00000324932 TENM2Q9NT68 2774 aa6.86□□□□□ -1.31
NUP98-201ENST00000324932 MYO15AQ9UKN7 3530 aa6.85□□□□□ -1.31
NUP98-201ENST00000324932 MXRA5Q9NR99 2828 aa6.84□□□□□ -1.32
NUP98-201ENST00000324932 MUC3AQ02505 3323 aa6.82□□□□□ -1.32
NUP98-201ENST00000324932 WDFY3Q8IZQ1 3526 aa6.8□□□□□ -1.32
NUP98-201ENST00000324932 PDZD2O15018 2839 aa6.79□□□□□ -1.32
NUP98-201ENST00000324932 SPEGQ15772 3267 aa6.78□□□□□ -1.32
NUP98-201ENST00000324932 PKD1L1Q8TDX9 2849 aa6.73□□□□□ -1.33
NUP98-201ENST00000324932 DMXL1Q9Y485 3027 aa6.67□□□□□ -1.34
NUP98-201ENST00000324932 KRTAP3-2Q9BYR7 98 aa6.6□□□□□ -1.35
NUP98-201ENST00000324932 ZFHX4Q86UP3 3567 aa6.58□□□□□ -1.36
NUP98-201ENST00000324932 SRRM2Q9UQ35 2752 aaKnown RBP6.57□□□□□ -1.36
NUP98-201ENST00000324932 CELSR1Q9NYQ6 3014 aa6.57□□□□□ -1.36
NUP98-201ENST00000324932 VWFP04275 2813 aa6.56□□□□□ -1.36
NUP98-201ENST00000324932 KRTAP10-12P60413 245 aa6.55□□□□□ -1.36
NUP98-201ENST00000324932 SPENQ96T58 3664 aaKnown RBP6.54□□□□□ -1.36
NUP98-201ENST00000324932 BSNQ9UPA5 3926 aa6.53□□□□□ -1.36
NUP98-201ENST00000324932 LOC400499M0QZD8 3231 aa6.52□□□□□ -1.37
NUP98-201ENST00000324932 KRTAP3-3Q9BYR6 98 aa6.51□□□□□ -1.37
NUP98-201ENST00000324932 ASPMQ8IZT6 3477 aa6.5□□□□□ -1.37
NUP98-201ENST00000324932 KRTAP23-1A1A580 65 aa6.49□□□□□ -1.37
NUP98-201ENST00000324932 FBN1P35555 2871 aaKnown RBP6.48□□□□□ -1.37
NUP98-201ENST00000324932 DCHS1Q96JQ0 3298 aa6.45□□□□□ -1.38
NUP98-201ENST00000324932 KRTAP12-3P60328 96 aa6.43□□□□□ -1.38
NUP98-201ENST00000324932 LAMA5O15230 3695 aa6.41□□□□□ -1.38
NUP98-201ENST00000324932 CRCT1Q9UGL9 99 aa6.4□□□□□ -1.38
NUP98-201ENST00000324932 MT1HL1P0DM35 61 aa6.35□□□□□ -1.39
NUP98-201ENST00000324932 OTOGQ6ZRI0 2925 aa6.32□□□□□ -1.4
NUP98-201ENST00000324932 LCE3AQ5TA76 89 aa6.28□□□□□ -1.4
NUP98-201ENST00000324932 FBN3Q75N90 2809 aa6.26□□□□□ -1.41
NUP98-201ENST00000324932 MEGF8Q7Z7M0 2845 aa6.21□□□□□ -1.42
NUP98-201ENST00000324932 SMG1Q96Q15 3661 aaKnown RBP6.2□□□□□ -1.42
NUP98-201ENST00000324932 RELNP78509 3460 aa6.17□□□□□ -1.42
NUP98-201ENST00000324932 KRTAP10-5P60370 271 aa6.1□□□□□ -1.43
NUP98-201ENST00000324932 KRTAP10-4P60372 401 aaPredicted RBP6.1□□□□□ -1.43
NUP98-201ENST00000324932 COL7A1Q02388 2944 aa6.08□□□□□ -1.44
NUP98-201ENST00000324932 LORP23490 312 aaPredicted RBP6.07□□□□□ -1.44
NUP98-201ENST00000324932 VPS13CQ709C8 3753 aa5.96□□□□□ -1.45
NUP98-201ENST00000324932 NBPF19A0A087WUL8 3843 aa5.92□□□□□ -1.46
NUP98-201ENST00000324932 ANK3Q12955 4377 aaKnown RBP5.92□□□□□ -1.46
NUP98-201ENST00000324932 KRTAP8-1Q8IUC2 63 aa5.91□□□□□ -1.46
NUP98-201ENST00000324932 AKAP9Q99996 3911 aa5.9□□□□□ -1.47
NUP98-201ENST00000324932 CSMD2Q7Z408 3487 aa5.89□□□□□ -1.47
NUP98-201ENST00000324932 ZFHX3Q15911 3703 aa5.89□□□□□ -1.47
NUP98-201ENST00000324932 KRTAP4-5Q9BYR2 181 aa5.88□□□□□ -1.47
NUP98-201ENST00000324932 SVEP1Q4LDE5 3571 aa5.86□□□□□ -1.47
NUP98-201ENST00000324932 CSMD1Q96PZ7 3565 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms