RNA–Protein interactions for RNA: ENST00000324306.10

ZKSCAN1-201, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN1, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-201ENST00000324306 LAMA1P25391 3075 aa5.21□□□□□ -1.57
ZKSCAN1-201ENST00000324306 ZANQ9Y493 2812 aa5.2□□□□□ -1.58
ZKSCAN1-201ENST00000324306 USP34Q70CQ2 3546 aa5.2□□□□□ -1.58
ZKSCAN1-201ENST00000324306 C10orf95Q9H7T3 257 aa5.19□□□□□ -1.58
ZKSCAN1-201ENST00000324306 KRTAP13-2Q52LG2 175 aa5.19□□□□□ -1.58
ZKSCAN1-201ENST00000324306 XIRP2A4UGR9 3374 aa5.18□□□□□ -1.58
ZKSCAN1-201ENST00000324306 ZZEF1O43149 2961 aa5.18□□□□□ -1.58
ZKSCAN1-201ENST00000324306 P0C880 135 aa5.16□□□□□ -1.58
ZKSCAN1-201ENST00000324306 HIVEP1P15822 2718 aa5.16□□□□□ -1.58
ZKSCAN1-201ENST00000324306 H0YAA0 97 aa5.15□□□□□ -1.58
ZKSCAN1-201ENST00000324306 UNC80Q8N2C7 3258 aa5.15□□□□□ -1.58
ZKSCAN1-201ENST00000324306 DNAH14Q0VDD8 3507 aa5.14□□□□□ -1.59
ZKSCAN1-201ENST00000324306 TNRC18O15417 2968 aaPredicted RBP5.13□□□□□ -1.59
ZKSCAN1-201ENST00000324306 BOD1L1Q8NFC6 3051 aa5.12□□□□□ -1.59
ZKSCAN1-201ENST00000324306 NF1P21359 2839 aa5.12□□□□□ -1.59
ZKSCAN1-201ENST00000324306 ATMQ13315 3056 aa5.1□□□□□ -1.59
ZKSCAN1-201ENST00000324306 SZT2Q5T011 3432 aa5.09□□□□□ -1.6
ZKSCAN1-201ENST00000324306 VCANP13611 3396 aa5.06□□□□□ -1.6
ZKSCAN1-201ENST00000324306 DMXL2Q8TDJ6 3036 aa5.06□□□□□ -1.6
ZKSCAN1-201ENST00000324306 CELSR2Q9HCU4 2923 aa5.06□□□□□ -1.6
ZKSCAN1-201ENST00000324306 ASH1LQ9NR48 2969 aaKnown RBP5.03□□□□□ -1.6
ZKSCAN1-201ENST00000324306 COL12A1Q99715 3063 aa5.03□□□□□ -1.6
ZKSCAN1-201ENST00000324306 MXRA5Q9NR99 2828 aa5.03□□□□□ -1.6
ZKSCAN1-201ENST00000324306 ADGRG4Q8IZF6 3080 aa5.01□□□□□ -1.61
ZKSCAN1-201ENST00000324306 FBN2P35556 2912 aa4.99□□□□□ -1.61
ZKSCAN1-201ENST00000324306 DCHS2Q6V1P9 2916 aa4.99□□□□□ -1.61
ZKSCAN1-201ENST00000324306 COL6A3P12111 3177 aa4.96□□□□□ -1.61
ZKSCAN1-201ENST00000324306 CELSR3Q9NYQ7 3312 aa4.96□□□□□ -1.61
ZKSCAN1-201ENST00000324306 REV3LO60673 3130 aa4.96□□□□□ -1.62
ZKSCAN1-201ENST00000324306 DMXL1Q9Y485 3027 aa4.95□□□□□ -1.62
ZKSCAN1-201ENST00000324306 CRYBG3Q68DQ2 2970 aa4.93□□□□□ -1.62
ZKSCAN1-201ENST00000324306 TGP01266 2768 aa4.93□□□□□ -1.62
ZKSCAN1-201ENST00000324306 XP32Q5T750 250 aa4.93□□□□□ -1.62
ZKSCAN1-201ENST00000324306 KRTAP1-4P0C5Y4 121 aa4.91□□□□□ -1.62
ZKSCAN1-201ENST00000324306 KRTAP13-3Q3SY46 172 aa4.91□□□□□ -1.62
ZKSCAN1-201ENST00000324306 TENM1Q9UKZ4 2725 aa4.89□□□□□ -1.63
ZKSCAN1-201ENST00000324306 TPRXLQ17RH7 258 aa4.89□□□□□ -1.63
ZKSCAN1-201ENST00000324306 TENM3Q9P273 2699 aa4.88□□□□□ -1.63
ZKSCAN1-201ENST00000324306 TENM4Q6N022 2769 aa4.88□□□□□ -1.63
ZKSCAN1-201ENST00000324306 PRO2289Q9P1D8 64 aa4.86□□□□□ -1.63
ZKSCAN1-201ENST00000324306 FREM2Q5SZK8 3169 aa4.86□□□□□ -1.63
ZKSCAN1-201ENST00000324306 EYSQ5T1H1 3165 aa4.84□□□□□ -1.63
ZKSCAN1-201ENST00000324306 KRTAP10-8P60410 259 aa4.83□□□□□ -1.64
ZKSCAN1-201ENST00000324306 KRTAP13-4Q3LI77 160 aa4.81□□□□□ -1.64
ZKSCAN1-201ENST00000324306 MYO15AQ9UKN7 3530 aa4.8□□□□□ -1.64
ZKSCAN1-201ENST00000324306 SPENQ96T58 3664 aaKnown RBP4.76□□□□□ -1.65
ZKSCAN1-201ENST00000324306 VWFP04275 2813 aa4.75□□□□□ -1.65
ZKSCAN1-201ENST00000324306 WDFY3Q8IZQ1 3526 aa4.75□□□□□ -1.65
ZKSCAN1-201ENST00000324306 KRTAP12-2P59991 146 aa4.75□□□□□ -1.65
ZKSCAN1-201ENST00000324306 DMDP11532 3685 aa4.74□□□□□ -1.65
ZKSCAN1-201ENST00000324306 INE1O15225 51 aa4.73□□□□□ -1.65
ZKSCAN1-201ENST00000324306 KRTAP21-3Q3LHN1 58 aa4.73□□□□□ -1.65
ZKSCAN1-201ENST00000324306 PDZD2O15018 2839 aa4.72□□□□□ -1.65
ZKSCAN1-201ENST00000324306 LAMA5O15230 3695 aa4.72□□□□□ -1.65
ZKSCAN1-201ENST00000324306 LOC400499M0QZD8 3231 aa4.69□□□□□ -1.66
ZKSCAN1-201ENST00000324306 CFAP47Q6ZTR5 3102 aa4.69□□□□□ -1.66
ZKSCAN1-201ENST00000324306 CELSR1Q9NYQ6 3014 aa4.68□□□□□ -1.66
ZKSCAN1-201ENST00000324306 KRTAP12-1P59990 96 aa4.67□□□□□ -1.66
ZKSCAN1-201ENST00000324306 TENM2Q9NT68 2774 aa4.65□□□□□ -1.66
ZKSCAN1-201ENST00000324306 ZFHX4Q86UP3 3567 aa4.64□□□□□ -1.67
ZKSCAN1-201ENST00000324306 NBPF19A0A087WUL8 3843 aa4.63□□□□□ -1.67
ZKSCAN1-201ENST00000324306 PKD1L1Q8TDX9 2849 aa4.63□□□□□ -1.67
ZKSCAN1-201ENST00000324306 FBN1P35555 2871 aaKnown RBP4.62□□□□□ -1.67
ZKSCAN1-201ENST00000324306 SPEGQ15772 3267 aa4.62□□□□□ -1.67
ZKSCAN1-201ENST00000324306 ASPMQ8IZT6 3477 aa4.61□□□□□ -1.67
ZKSCAN1-201ENST00000324306 KRTAP15-1Q3LI76 137 aa4.61□□□□□ -1.67
ZKSCAN1-201ENST00000324306 KRTAP10-10P60014 251 aa4.59□□□□□ -1.67
ZKSCAN1-201ENST00000324306 SMG1Q96Q15 3661 aaKnown RBP4.58□□□□□ -1.68
ZKSCAN1-201ENST00000324306 A0A1B0GVY2 172 aa4.55□□□□□ -1.68
ZKSCAN1-201ENST00000324306 OTOGQ6ZRI0 2925 aa4.55□□□□□ -1.68
ZKSCAN1-201ENST00000324306 AKAP9Q99996 3911 aa4.53□□□□□ -1.68
ZKSCAN1-201ENST00000324306 RELNP78509 3460 aa4.51□□□□□ -1.69
ZKSCAN1-201ENST00000324306 MEGF8Q7Z7M0 2845 aa4.51□□□□□ -1.69
ZKSCAN1-201ENST00000324306 VPS13CQ709C8 3753 aa4.5□□□□□ -1.69
ZKSCAN1-201ENST00000324306 ZFHX3Q15911 3703 aa4.49□□□□□ -1.69
ZKSCAN1-201ENST00000324306 KRTAP3-1Q9BYR8 98 aa4.49□□□□□ -1.69
ZKSCAN1-201ENST00000324306 KRTAP10-6P60371 365 aaPredicted RBP4.48□□□□□ -1.69
ZKSCAN1-201ENST00000324306 KRTAP23-1A1A580 65 aa4.48□□□□□ -1.69
ZKSCAN1-201ENST00000324306 TRRAPQ9Y4A5 3859 aa4.43□□□□□ -1.7
ZKSCAN1-201ENST00000324306 SRRM2Q9UQ35 2752 aaKnown RBP4.43□□□□□ -1.7
ZKSCAN1-201ENST00000324306 CSMD1Q96PZ7 3565 aa4.42□□□□□ -1.7
ZKSCAN1-201ENST00000324306 BSNQ9UPA5 3926 aa4.4□□□□□ -1.7
ZKSCAN1-201ENST00000324306 DCHS1Q96JQ0 3298 aa4.38□□□□□ -1.71
ZKSCAN1-201ENST00000324306 SVEP1Q4LDE5 3571 aa4.38□□□□□ -1.71
ZKSCAN1-201ENST00000324306 COL7A1Q02388 2944 aa4.33□□□□□ -1.72
ZKSCAN1-201ENST00000324306 FBN3Q75N90 2809 aa4.32□□□□□ -1.72
ZKSCAN1-201ENST00000324306 KRTAP3-2Q9BYR7 98 aa4.3□□□□□ -1.72
ZKSCAN1-201ENST00000324306 MUC3AQ02505 3323 aa4.24□□□□□ -1.73
ZKSCAN1-201ENST00000324306 KRTAP10-12P60413 245 aa4.24□□□□□ -1.73
ZKSCAN1-201ENST00000324306 KRTAP3-3Q9BYR6 98 aa4.24□□□□□ -1.73
ZKSCAN1-201ENST00000324306 CUBNO60494 3623 aa4.17□□□□□ -1.74
ZKSCAN1-201ENST00000324306 ALMS1Q8TCU4 4167 aa4.17□□□□□ -1.74
ZKSCAN1-201ENST00000324306 KRTAP12-3P60328 96 aa4.14□□□□□ -1.75
ZKSCAN1-201ENST00000324306 ZNF469Q96JG9 3925 aaPredicted RBP4.09□□□□□ -1.75
ZKSCAN1-201ENST00000324306 CSMD2Q7Z408 3487 aa4.07□□□□□ -1.76
ZKSCAN1-201ENST00000324306 ANK3Q12955 4377 aaKnown RBP4.06□□□□□ -1.76
ZKSCAN1-201ENST00000324306 CSMD3Q7Z407 3707 aa4□□□□□ -1.77
ZKSCAN1-201ENST00000324306 LCE3AQ5TA76 89 aa4□□□□□ -1.77
ZKSCAN1-201ENST00000324306 HECTD4Q9Y4D8 3996 aa4□□□□□ -1.77
ZKSCAN1-201ENST00000324306 ANK2Q01484 3957 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms