RNA–Protein interactions for RNA: ENST00000319170.9

RAPH1-202, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPH1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-202ENST00000319170 LAMA1P25391 3075 aa7.75□□□□□ -1.17
RAPH1-202ENST00000319170 IGSF10Q6WRI0 2623 aa7.74□□□□□ -1.17
RAPH1-202ENST00000319170 UBR5O95071 2799 aaPredicted RBP7.73□□□□□ -1.17
RAPH1-202ENST00000319170 COL6A3P12111 3177 aa7.71□□□□□ -1.18
RAPH1-202ENST00000319170 SZT2Q5T011 3432 aa7.67□□□□□ -1.18
RAPH1-202ENST00000319170 SPTBN5Q9NRC6 3674 aaKnown RBP7.67□□□□□ -1.18
RAPH1-202ENST00000319170 KRTAP10-8P60410 259 aa7.67□□□□□ -1.18
RAPH1-202ENST00000319170 FRYLO94915 3013 aa7.66□□□□□ -1.18
RAPH1-202ENST00000319170 ASH1LQ9NR48 2969 aaKnown RBP7.65□□□□□ -1.18
RAPH1-202ENST00000319170 PP632Q6XCG6 107 aa7.64□□□□□ -1.19
RAPH1-202ENST00000319170 HIVEP1P15822 2718 aa7.63□□□□□ -1.19
RAPH1-202ENST00000319170 A0A1B0GVY2 172 aa7.62□□□□□ -1.19
RAPH1-202ENST00000319170 VCANP13611 3396 aa7.56□□□□□ -1.2
RAPH1-202ENST00000319170 TACC2O95359 2948 aa7.56□□□□□ -1.2
RAPH1-202ENST00000319170 CFAP47Q6ZTR5 3102 aa7.55□□□□□ -1.2
RAPH1-202ENST00000319170 H0YAA0 97 aa7.54□□□□□ -1.2
RAPH1-202ENST00000319170 SPEGQ15772 3267 aa7.53□□□□□ -1.2
RAPH1-202ENST00000319170 DMXL2Q8TDJ6 3036 aa7.53□□□□□ -1.2
RAPH1-202ENST00000319170 BOD1L1Q8NFC6 3051 aa7.53□□□□□ -1.2
RAPH1-202ENST00000319170 XP32Q5T750 250 aa7.52□□□□□ -1.21
RAPH1-202ENST00000319170 COL12A1Q99715 3063 aa7.51□□□□□ -1.21
RAPH1-202ENST00000319170 NBEAQ8NFP9 2946 aa7.49□□□□□ -1.21
RAPH1-202ENST00000319170 P0C880 135 aa7.45□□□□□ -1.22
RAPH1-202ENST00000319170 ZZEF1O43149 2961 aa7.44□□□□□ -1.22
RAPH1-202ENST00000319170 PRO2289Q9P1D8 64 aa7.41□□□□□ -1.22
RAPH1-202ENST00000319170 KRTAP10-10P60014 251 aa7.41□□□□□ -1.22
RAPH1-202ENST00000319170 CELSR2Q9HCU4 2923 aa7.4□□□□□ -1.23
RAPH1-202ENST00000319170 TNRC18O15417 2968 aaPredicted RBP7.39□□□□□ -1.23
RAPH1-202ENST00000319170 WDFY3Q8IZQ1 3526 aa7.38□□□□□ -1.23
RAPH1-202ENST00000319170 ADGRG4Q8IZF6 3080 aa7.37□□□□□ -1.23
RAPH1-202ENST00000319170 KRTAP1-4P0C5Y4 121 aa7.36□□□□□ -1.23
RAPH1-202ENST00000319170 ATMQ13315 3056 aa7.34□□□□□ -1.23
RAPH1-202ENST00000319170 TPRXLQ17RH7 258 aa7.33□□□□□ -1.24
RAPH1-202ENST00000319170 FLNCQ14315 2725 aa7.33□□□□□ -1.24
RAPH1-202ENST00000319170 TENM1Q9UKZ4 2725 aa7.33□□□□□ -1.24
RAPH1-202ENST00000319170 NBPF19A0A087WUL8 3843 aa7.3□□□□□ -1.24
RAPH1-202ENST00000319170 ASPMQ8IZT6 3477 aa7.3□□□□□ -1.24
RAPH1-202ENST00000319170 TGP01266 2768 aa7.26□□□□□ -1.25
RAPH1-202ENST00000319170 HRNRQ86YZ3 2850 aaPredicted RBP7.24□□□□□ -1.25
RAPH1-202ENST00000319170 DMXL1Q9Y485 3027 aa7.24□□□□□ -1.25
RAPH1-202ENST00000319170 KRTAP21-3Q3LHN1 58 aa7.23□□□□□ -1.25
RAPH1-202ENST00000319170 DCHS2Q6V1P9 2916 aa7.22□□□□□ -1.25
RAPH1-202ENST00000319170 MYO15AQ9UKN7 3530 aa7.2□□□□□ -1.26
RAPH1-202ENST00000319170 KRTAP13-3Q3SY46 172 aa7.18□□□□□ -1.26
RAPH1-202ENST00000319170 CELSR1Q9NYQ6 3014 aa7.18□□□□□ -1.26
RAPH1-202ENST00000319170 LAMA5O15230 3695 aa7.16□□□□□ -1.26
RAPH1-202ENST00000319170 NF1P21359 2839 aa7.16□□□□□ -1.26
RAPH1-202ENST00000319170 FBN2P35556 2912 aa7.16□□□□□ -1.26
RAPH1-202ENST00000319170 EYSQ5T1H1 3165 aa7.12□□□□□ -1.27
RAPH1-202ENST00000319170 ZANQ9Y493 2812 aa7.12□□□□□ -1.27
RAPH1-202ENST00000319170 KRTAP12-2P59991 146 aa7.12□□□□□ -1.27
RAPH1-202ENST00000319170 NIPBLQ6KC79 2804 aaeCLIP7.11□□□□□ -1.27
RAPH1-202ENST00000319170 LOC400499M0QZD8 3231 aa7.09□□□□□ -1.27
RAPH1-202ENST00000319170 TENM3Q9P273 2699 aa7.08□□□□□ -1.28
RAPH1-202ENST00000319170 DCHS1Q96JQ0 3298 aa7.07□□□□□ -1.28
RAPH1-202ENST00000319170 ZFHX4Q86UP3 3567 aa7.05□□□□□ -1.28
RAPH1-202ENST00000319170 CSMD1Q96PZ7 3565 aa7.04□□□□□ -1.28
RAPH1-202ENST00000319170 MXRA5Q9NR99 2828 aa7.02□□□□□ -1.29
RAPH1-202ENST00000319170 TENM4Q6N022 2769 aa6.99□□□□□ -1.29
RAPH1-202ENST00000319170 SPENQ96T58 3664 aaKnown RBP6.99□□□□□ -1.29
RAPH1-202ENST00000319170 KRTAP13-4Q3LI77 160 aa6.99□□□□□ -1.29
RAPH1-202ENST00000319170 PDZD2O15018 2839 aa6.92□□□□□ -1.3
RAPH1-202ENST00000319170 SMG1Q96Q15 3661 aaKnown RBP6.92□□□□□ -1.3
RAPH1-202ENST00000319170 VWFP04275 2813 aa6.89□□□□□ -1.31
RAPH1-202ENST00000319170 DMDP11532 3685 aa6.88□□□□□ -1.31
RAPH1-202ENST00000319170 KRTAP12-1P59990 96 aa6.88□□□□□ -1.31
RAPH1-202ENST00000319170 KRTAP15-1Q3LI76 137 aa6.86□□□□□ -1.31
RAPH1-202ENST00000319170 TENM2Q9NT68 2774 aa6.82□□□□□ -1.32
RAPH1-202ENST00000319170 PKD1L1Q8TDX9 2849 aa6.8□□□□□ -1.32
RAPH1-202ENST00000319170 RELNP78509 3460 aa6.79□□□□□ -1.32
RAPH1-202ENST00000319170 VPS13CQ709C8 3753 aa6.74□□□□□ -1.33
RAPH1-202ENST00000319170 ZFHX3Q15911 3703 aa6.68□□□□□ -1.34
RAPH1-202ENST00000319170 KRTAP3-1Q9BYR8 98 aa6.63□□□□□ -1.35
RAPH1-202ENST00000319170 SRRM2Q9UQ35 2752 aaKnown RBP6.61□□□□□ -1.35
RAPH1-202ENST00000319170 SVEP1Q4LDE5 3571 aa6.59□□□□□ -1.35
RAPH1-202ENST00000319170 AKAP9Q99996 3911 aa6.57□□□□□ -1.36
RAPH1-202ENST00000319170 CRCT1Q9UGL9 99 aa6.54□□□□□ -1.36
RAPH1-202ENST00000319170 TRRAPQ9Y4A5 3859 aa6.54□□□□□ -1.36
RAPH1-202ENST00000319170 MEGF8Q7Z7M0 2845 aa6.53□□□□□ -1.36
RAPH1-202ENST00000319170 INE1O15225 51 aa6.51□□□□□ -1.37
RAPH1-202ENST00000319170 COL7A1Q02388 2944 aa6.51□□□□□ -1.37
RAPH1-202ENST00000319170 KRTAP10-6P60371 365 aaPredicted RBP6.48□□□□□ -1.37
RAPH1-202ENST00000319170 BSNQ9UPA5 3926 aa6.46□□□□□ -1.38
RAPH1-202ENST00000319170 KRTAP10-12P60413 245 aa6.45□□□□□ -1.38
RAPH1-202ENST00000319170 FBN3Q75N90 2809 aa6.42□□□□□ -1.38
RAPH1-202ENST00000319170 CUBNO60494 3623 aa6.36□□□□□ -1.39
RAPH1-202ENST00000319170 FBN1P35555 2871 aaKnown RBP6.34□□□□□ -1.4
RAPH1-202ENST00000319170 CSMD3Q7Z407 3707 aa6.33□□□□□ -1.4
RAPH1-202ENST00000319170 ALMS1Q8TCU4 4167 aa6.31□□□□□ -1.4
RAPH1-202ENST00000319170 MUC3AQ02505 3323 aa6.23□□□□□ -1.41
RAPH1-202ENST00000319170 KRTAP3-3Q9BYR6 98 aa6.22□□□□□ -1.41
RAPH1-202ENST00000319170 KRTAP3-2Q9BYR7 98 aa6.21□□□□□ -1.42
RAPH1-202ENST00000319170 ANK3Q12955 4377 aaKnown RBP6.21□□□□□ -1.42
RAPH1-202ENST00000319170 KRTAP12-3P60328 96 aa6.2□□□□□ -1.42
RAPH1-202ENST00000319170 OTOGQ6ZRI0 2925 aa6.18□□□□□ -1.42
RAPH1-202ENST00000319170 CSMD2Q7Z408 3487 aa6.18□□□□□ -1.42
RAPH1-202ENST00000319170 LCE3AQ5TA76 89 aa6.15□□□□□ -1.42
RAPH1-202ENST00000319170 MT1HL1P0DM35 61 aa6.13□□□□□ -1.43
RAPH1-202ENST00000319170 HUWE1Q7Z6Z7 4374 aaKnown RBP6.08□□□□□ -1.44
RAPH1-202ENST00000319170 KRTAP23-1A1A580 65 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms