RNA–Protein interactions for RNA: ENST00000311066.9

PRDM2-202, Transcript of PR/SET domain 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM2, Length 7,437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-202ENST00000311066 Q5XG85 94 aa3.83□□□□□ -1.8
PRDM2-202ENST00000311066 KRTAP11-1Q8IUC1 163 aa3.83□□□□□ -1.8
PRDM2-202ENST00000311066 ATMQ13315 3056 aa3.83□□□□□ -1.8
PRDM2-202ENST00000311066 STAB2Q8WWQ8 2551 aa3.83□□□□□ -1.8
PRDM2-202ENST00000311066 RPS29P62273 56 aaKnown RBP3.83□□□□□ -1.8
PRDM2-202ENST00000311066 NBEAL2Q6ZNJ1 2754 aa3.83□□□□□ -1.8
PRDM2-202ENST00000311066 DCHS1Q96JQ0 3298 aa3.82□□□□□ -1.8
PRDM2-202ENST00000311066 RPL37P61927 97 aaKnown RBP3.81□□□□□ -1.8
PRDM2-202ENST00000311066 KRTAP7-1Q8IUC3 87 aa3.81□□□□□ -1.8
PRDM2-202ENST00000311066 TACC2O95359 2948 aa3.81□□□□□ -1.8
PRDM2-202ENST00000311066 CYSTM1Q9H1C7 97 aa3.81□□□□□ -1.8
PRDM2-202ENST00000311066 CFAP47Q6ZTR5 3102 aa3.8□□□□□ -1.8
PRDM2-202ENST00000311066 ZZEF1O43149 2961 aa3.8□□□□□ -1.8
PRDM2-202ENST00000311066 COL12A1Q99715 3063 aa3.8□□□□□ -1.8
PRDM2-202ENST00000311066 ADGRG4Q8IZF6 3080 aa3.8□□□□□ -1.8
PRDM2-202ENST00000311066 APCP25054 2843 aa3.8□□□□□ -1.8
PRDM2-202ENST00000311066 KRTAP13-2Q52LG2 175 aa3.79□□□□□ -1.8
PRDM2-202ENST00000311066 ASB16-AS1Q495Z4 193 aa3.78□□□□□ -1.8
PRDM2-202ENST00000311066 KRTAP13-1Q8IUC0 172 aa3.78□□□□□ -1.8
PRDM2-202ENST00000311066 NBEAQ8NFP9 2946 aa3.77□□□□□ -1.81
PRDM2-202ENST00000311066 KMT2BQ9UMN6 2715 aaPredicted RBP3.77□□□□□ -1.81
PRDM2-202ENST00000311066 RELNP78509 3460 aa3.77□□□□□ -1.81
PRDM2-202ENST00000311066 ZFHX4Q86UP3 3567 aa3.76□□□□□ -1.81
PRDM2-202ENST00000311066 A8MU10 97 aa3.76□□□□□ -1.81
PRDM2-202ENST00000311066 KALRNO60229 2985 aa3.76□□□□□ -1.81
PRDM2-202ENST00000311066 UTP20O75691 2785 aaKnown RBP3.76□□□□□ -1.81
PRDM2-202ENST00000311066 NIPBLQ6KC79 2804 aaeCLIP3.75□□□□□ -1.817e-6■□□□□ 10.5
PRDM2-202ENST00000311066 KRTAP29-1A8MX34 341 aaPredicted RBP3.74□□□□□ -1.81
PRDM2-202ENST00000311066 NOTCH2NLQ7Z3S9 236 aa3.73□□□□□ -1.81
PRDM2-202ENST00000311066 LRBAP50851 2863 aa3.72□□□□□ -1.81
PRDM2-202ENST00000311066 P0C880 135 aa3.71□□□□□ -1.82
PRDM2-202ENST00000311066 KRTAP25-1Q3LHN0 102 aa3.7□□□□□ -1.82
PRDM2-202ENST00000311066 DMBT1Q9UGM3 2413 aaPredicted RBP3.69□□□□□ -1.82
PRDM2-202ENST00000311066 SMG1Q96Q15 3661 aaKnown RBP3.67□□□□□ -1.82
PRDM2-202ENST00000311066 A8MUU9 505 aa3.66□□□□□ -1.82
PRDM2-202ENST00000311066 KRTAP1-4P0C5Y4 121 aa3.65□□□□□ -1.82
PRDM2-202ENST00000311066 CRYBG3Q68DQ2 2970 aa3.63□□□□□ -1.83
PRDM2-202ENST00000311066 ZANQ9Y493 2812 aa3.61□□□□□ -1.83
PRDM2-202ENST00000311066 A0A1B0GVY2 172 aa3.6□□□□□ -1.83
PRDM2-202ENST00000311066 XP32Q5T750 250 aa3.59□□□□□ -1.83
PRDM2-202ENST00000311066 ASH1LQ9NR48 2969 aaKnown RBP3.59□□□□□ -1.83
PRDM2-202ENST00000311066 DCHS2Q6V1P9 2916 aa3.59□□□□□ -1.84
PRDM2-202ENST00000311066 CELSR2Q9HCU4 2923 aa3.58□□□□□ -1.84
PRDM2-202ENST00000311066 TNP1P09430 55 aa3.58□□□□□ -1.84
PRDM2-202ENST00000311066 HRNRQ86YZ3 2850 aaPredicted RBP3.58□□□□□ -1.84
PRDM2-202ENST00000311066 KRTAP10-8P60410 259 aa3.58□□□□□ -1.84
PRDM2-202ENST00000311066 TPRXLQ17RH7 258 aa3.57□□□□□ -1.84
PRDM2-202ENST00000311066 TENM2Q9NT68 2774 aa3.56□□□□□ -1.84
PRDM2-202ENST00000311066 SPENQ96T58 3664 aaKnown RBP3.56□□□□□ -1.84
PRDM2-202ENST00000311066 SVEP1Q4LDE5 3571 aa3.55□□□□□ -1.84
PRDM2-202ENST00000311066 MXRA5Q9NR99 2828 aa3.54□□□□□ -1.84
PRDM2-202ENST00000311066 A6NN06 94 aa3.54□□□□□ -1.84
PRDM2-202ENST00000311066 NF1P21359 2839 aa3.54□□□□□ -1.84
PRDM2-202ENST00000311066 FBN2P35556 2912 aa3.53□□□□□ -1.84
PRDM2-202ENST00000311066 CSMD1Q96PZ7 3565 aa3.52□□□□□ -1.85
PRDM2-202ENST00000311066 BSNQ9UPA5 3926 aa3.51□□□□□ -1.85
PRDM2-202ENST00000311066 KRTAP13-3Q3SY46 172 aa3.5□□□□□ -1.85
PRDM2-202ENST00000311066 TENM3Q9P273 2699 aa3.5□□□□□ -1.85
PRDM2-202ENST00000311066 PDZD2O15018 2839 aa3.49□□□□□ -1.85
PRDM2-202ENST00000311066 CSMD2Q7Z408 3487 aa3.49□□□□□ -1.85
PRDM2-202ENST00000311066 NBPF19A0A087WUL8 3843 aa3.47□□□□□ -1.85
PRDM2-202ENST00000311066 CELSR1Q9NYQ6 3014 aa3.46□□□□□ -1.86
PRDM2-202ENST00000311066 TENM1Q9UKZ4 2725 aa3.45□□□□□ -1.86
PRDM2-202ENST00000311066 OTOGQ6ZRI0 2925 aa3.44□□□□□ -1.86
PRDM2-202ENST00000311066 KRTAP10-10P60014 251 aa3.42□□□□□ -1.86
PRDM2-202ENST00000311066 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
PRDM2-202ENST00000311066 PP632Q6XCG6 107 aa3.41□□□□□ -1.86
PRDM2-202ENST00000311066 CUBNO60494 3623 aa3.41□□□□□ -1.86
PRDM2-202ENST00000311066 ZFHX3Q15911 3703 aa3.39□□□□□ -1.87
PRDM2-202ENST00000311066 VPS13CQ709C8 3753 aa3.37□□□□□ -1.87
PRDM2-202ENST00000311066 PKD1L1Q8TDX9 2849 aa3.37□□□□□ -1.87
PRDM2-202ENST00000311066 PRO2289Q9P1D8 64 aa3.32□□□□□ -1.88
PRDM2-202ENST00000311066 ANK3Q12955 4377 aaKnown RBP3.31□□□□□ -1.88
PRDM2-202ENST00000311066 FBN1P35555 2871 aaKnown RBP3.31□□□□□ -1.88
PRDM2-202ENST00000311066 VWFP04275 2813 aa3.31□□□□□ -1.88
PRDM2-202ENST00000311066 CRCT1Q9UGL9 99 aa3.31□□□□□ -1.88
PRDM2-202ENST00000311066 H0YAA0 97 aa3.3□□□□□ -1.88
PRDM2-202ENST00000311066 TGP01266 2768 aa3.3□□□□□ -1.88
PRDM2-202ENST00000311066 KRTAP12-2P59991 146 aa3.27□□□□□ -1.89
PRDM2-202ENST00000311066 FBN3Q75N90 2809 aa3.27□□□□□ -1.89
PRDM2-202ENST00000311066 MT1HL1P0DM35 61 aa3.26□□□□□ -1.89
PRDM2-202ENST00000311066 ZNF469Q96JG9 3925 aaPredicted RBP3.25□□□□□ -1.89
PRDM2-202ENST00000311066 KRTAP19-4Q3LI73 84 aa3.24□□□□□ -1.89
PRDM2-202ENST00000311066 TRRAPQ9Y4A5 3859 aa3.22□□□□□ -1.89
PRDM2-202ENST00000311066 KRTAP4-5Q9BYR2 181 aa3.21□□□□□ -1.9
PRDM2-202ENST00000311066 KRTAP10-4P60372 401 aaPredicted RBP3.18□□□□□ -1.9
PRDM2-202ENST00000311066 AKAP9Q99996 3911 aa3.17□□□□□ -1.9
PRDM2-202ENST00000311066 KRTAP15-1Q3LI76 137 aa3.17□□□□□ -1.9
PRDM2-202ENST00000311066 KRTAP3-1Q9BYR8 98 aa3.15□□□□□ -1.91
PRDM2-202ENST00000311066 SRRM2Q9UQ35 2752 aaKnown RBP3.13□□□□□ -1.91
PRDM2-202ENST00000311066 MEGF8Q7Z7M0 2845 aa3.1□□□□□ -1.91
PRDM2-202ENST00000311066 DNHD1Q96M86 4753 aa3.09□□□□□ -1.92
PRDM2-202ENST00000311066 ALMS1Q8TCU4 4167 aa3.08□□□□□ -1.92
PRDM2-202ENST00000311066 HUWE1Q7Z6Z7 4374 aaKnown RBP3.07□□□□□ -1.92
PRDM2-202ENST00000311066 KRTAP3-3Q9BYR6 98 aa3.07□□□□□ -1.92
PRDM2-202ENST00000311066 KRTAP3-2Q9BYR7 98 aa3.07□□□□□ -1.92
PRDM2-202ENST00000311066 KRTAP13-4Q3LI77 160 aa3.06□□□□□ -1.92
PRDM2-202ENST00000311066 KRTAP12-1P59990 96 aa3.05□□□□□ -1.92
PRDM2-202ENST00000311066 DNAH5Q8TE73 4624 aa3.03□□□□□ -1.92
PRDM2-202ENST00000311066 DNAH11Q96DT5 4516 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms