RNA–Protein interactions for RNA: ENST00000311066.9

PRDM2-202, Transcript of PR/SET domain 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM2, Length 7,437 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-202ENST00000311066 DCAF8L2P0C7V8 631 aa11.95□□□□□ -0.5
PRDM2-202ENST00000311066 NISCHQ9Y2I1 1504 aa11.74□□□□□ -0.53
PRDM2-202ENST00000311066 SUPT5HO00267 1087 aaKnown RBP11.09□□□□□ -0.63
PRDM2-202ENST00000311066 SHROOM4Q9ULL8 1493 aa11.02□□□□□ -0.64
PRDM2-202ENST00000311066 EHMT2Q96KQ7 1210 aa10.61□□□□□ -0.71
PRDM2-202ENST00000311066 FAM9AQ8IZU1 332 aaPredicted RBP10.53□□□□□ -0.72
PRDM2-202ENST00000311066 APLP2Q06481 763 aa10.5□□□□□ -0.73
PRDM2-202ENST00000311066 TRIM41Q8WV44 630 aa10.33□□□□□ -0.76
PRDM2-202ENST00000311066 ABCC9O60706 1549 aa10.3□□□□□ -0.76
PRDM2-202ENST00000311066 RANGAP1P46060 587 aaPredicted RBP10.29□□□□□ -0.76
PRDM2-202ENST00000311066 MYT1Q01538 1121 aa10.23□□□□□ -0.77
PRDM2-202ENST00000311066 ATP1B4Q9UN42 357 aaPredicted RBP10.22□□□□□ -0.77
PRDM2-202ENST00000311066 TTBK1Q5TCY1 1321 aaPredicted RBP10.21□□□□□ -0.78
PRDM2-202ENST00000311066 UBTFP17480 764 aaKnown RBP10.19□□□□□ -0.78
PRDM2-202ENST00000311066 PABPN1Q86U42 306 aaKnown RBP eCLIP10.17□□□□□ -0.78
PRDM2-202ENST00000311066 PELP1Q8IZL8 1130 aaKnown RBP10.13□□□□□ -0.79
PRDM2-202ENST00000311066 ERICH6Q7L0X2 663 aa10.07□□□□□ -0.8
PRDM2-202ENST00000311066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.99□□□□□ -0.81
PRDM2-202ENST00000311066 HNRNPUL2Q1KMD3 747 aaKnown RBP9.99□□□□□ -0.81
PRDM2-202ENST00000311066 PCGF6Q9BYE7 350 aa9.98□□□□□ -0.81
PRDM2-202ENST00000311066 MYT1LQ9UL68 1186 aa9.93□□□□□ -0.82
PRDM2-202ENST00000311066 CCER1Q8TC90 406 aaPredicted RBP9.88□□□□□ -0.83
PRDM2-202ENST00000311066 CHIC1Q5VXU3 224 aa9.83□□□□□ -0.84
PRDM2-202ENST00000311066 PPARGC1BQ86YN6 1023 aaKnown RBP9.82□□□□□ -0.84
PRDM2-202ENST00000311066 ZEB1P37275 1124 aaPredicted RBP9.81□□□□□ -0.84
PRDM2-202ENST00000311066 FBLN2P98095 1184 aa9.78□□□□□ -0.84
PRDM2-202ENST00000311066 ITGAEP38570 1179 aa9.78□□□□□ -0.84
PRDM2-202ENST00000311066 SCRIBQ14160 1630 aa9.75□□□□□ -0.85
PRDM2-202ENST00000311066 LOC105371045A0A1W2PR82 267 aa9.72□□□□□ -0.85
PRDM2-202ENST00000311066 ZCCHC6Q5VYS8 1495 aaKnown RBP9.71□□□□□ -0.86
PRDM2-202ENST00000311066 CCDC180Q9P1Z9 1646 aa9.67□□□□□ -0.86
PRDM2-202ENST00000311066 TRIM26Q12899 539 aaPredicted RBP9.66□□□□□ -0.86
PRDM2-202ENST00000311066 RB1CC1Q8TDY2 1594 aa9.62□□□□□ -0.87
PRDM2-202ENST00000311066 FAM50AQ14320 339 aaKnown RBP9.6□□□□□ -0.87
PRDM2-202ENST00000311066 CENPBP07199 599 aaPredicted RBP9.59□□□□□ -0.87
PRDM2-202ENST00000311066 POLR3GLQ9BT43 218 aa9.59□□□□□ -0.87
PRDM2-202ENST00000311066 CSRNP3Q8WYN3 585 aa9.56□□□□□ -0.88
PRDM2-202ENST00000311066 TRIM52Q96A61 297 aa9.55□□□□□ -0.88
PRDM2-202ENST00000311066 P3H3Q8IVL6 736 aa9.54□□□□□ -0.88
PRDM2-202ENST00000311066 YTHDC1Q96MU7 727 aaKnown RBP9.54□□□□□ -0.88
PRDM2-202ENST00000311066 ARID3CA6NKF2 412 aa9.53□□□□□ -0.88
PRDM2-202ENST00000311066 NACADO15069 1562 aa9.51□□□□□ -0.89
PRDM2-202ENST00000311066 CDK11AQ9UQ88 783 aaPredicted RBP9.5□□□□□ -0.89
PRDM2-202ENST00000311066 NPM1P06748 294 aaKnown RBP eCLIP9.5□□□□□ -0.89
PRDM2-202ENST00000311066 SLC4A1APQ9BWU0 796 aaKnown RBP9.48□□□□□ -0.89
PRDM2-202ENST00000311066 NEFLP07196 543 aa9.48□□□□□ -0.89
PRDM2-202ENST00000311066 ZNF777Q9ULD5 760 aaPredicted RBP9.45□□□□□ -0.9
PRDM2-202ENST00000311066 CHMP7Q8WUX9 453 aaPredicted RBP9.43□□□□□ -0.9
PRDM2-202ENST00000311066 CNGB1Q14028 1251 aaPredicted RBP9.43□□□□□ -0.9
PRDM2-202ENST00000311066 ESF1Q9H501 851 aaKnown RBP9.41□□□□□ -0.9
PRDM2-202ENST00000311066 DAXXQ9UER7 740 aaPredicted RBP9.41□□□□□ -0.9
PRDM2-202ENST00000311066 ZNF326Q5BKZ1 582 aaKnown RBP9.38□□□□□ -0.91
PRDM2-202ENST00000311066 BAZ1BQ9UIG0 1483 aaKnown RBP9.38□□□□□ -0.91
PRDM2-202ENST00000311066 NEUROD1Q13562 356 aa9.38□□□□□ -0.91
PRDM2-202ENST00000311066 BCANQ96GW7 911 aa9.38□□□□□ -0.91
PRDM2-202ENST00000311066 HRCP23327 699 aa9.35□□□□□ -0.91
PRDM2-202ENST00000311066 RSF1Q96T23 1441 aaPredicted RBP9.35□□□□□ -0.91
PRDM2-202ENST00000311066 ERCC6Q03468 1493 aa9.33□□□□□ -0.92
PRDM2-202ENST00000311066 DCAF1Q9Y4B6 1507 aa9.3□□□□□ -0.92
PRDM2-202ENST00000311066 STAG3Q9UJ98 1225 aa9.29□□□□□ -0.92
PRDM2-202ENST00000311066 PLPPR3Q6T4P5 718 aa9.28□□□□□ -0.92
PRDM2-202ENST00000311066 BAZ1AQ9NRL2 1556 aaPredicted RBP9.26□□□□□ -0.93
PRDM2-202ENST00000311066 CHGAP10645 457 aaKnown RBP9.26□□□□□ -0.93
PRDM2-202ENST00000311066 WRNQ14191 1432 aaPredicted RBP eCLIP9.26□□□□□ -0.939e-6■■■■■ 50.1
PRDM2-202ENST00000311066 TSPY4P0CV99 314 aa9.25□□□□□ -0.93
PRDM2-202ENST00000311066 TSPY10P0CW01 314 aa9.25□□□□□ -0.93
PRDM2-202ENST00000311066 MTUS2Q5JR59 1369 aa9.23□□□□□ -0.93
PRDM2-202ENST00000311066 PLEKHD1A6NEE1 506 aa9.22□□□□□ -0.93
PRDM2-202ENST00000311066 KCNH8Q96L42 1107 aa9.22□□□□□ -0.93
PRDM2-202ENST00000311066 CECR2Q9BXF3 1484 aa9.21□□□□□ -0.93
PRDM2-202ENST00000311066 EEA1Q15075 1411 aa9.21□□□□□ -0.93
PRDM2-202ENST00000311066 KIF27Q86VH2 1401 aa9.21□□□□□ -0.93
PRDM2-202ENST00000311066 CHIC2Q9UKJ5 165 aa9.2□□□□□ -0.94
PRDM2-202ENST00000311066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.2□□□□□ -0.94
PRDM2-202ENST00000311066 CLIP1P30622 1438 aa9.19□□□□□ -0.94
PRDM2-202ENST00000311066 BCL11AQ9H165 835 aa9.18□□□□□ -0.94
PRDM2-202ENST00000311066 ZNF316A6NFI3 1004 aaPredicted RBP9.18□□□□□ -0.94
PRDM2-202ENST00000311066 NEFMP07197 916 aa9.17□□□□□ -0.94
PRDM2-202ENST00000311066 DIEXFQ68CQ4 756 aaKnown RBP9.17□□□□□ -0.94
PRDM2-202ENST00000311066 ANP32CO43423 234 aa9.16□□□□□ -0.94
PRDM2-202ENST00000311066 PDS5BQ9NTI5 1447 aa9.15□□□□□ -0.94
PRDM2-202ENST00000311066 GOLGA3Q08378 1498 aa9.14□□□□□ -0.95
PRDM2-202ENST00000311066 TONSLQ96HA7 1378 aa9.14□□□□□ -0.95
PRDM2-202ENST00000311066 SLC24A1O60721 1099 aa9.13□□□□□ -0.95
PRDM2-202ENST00000311066 SMARCA2P51531 1590 aa9.12□□□□□ -0.95
PRDM2-202ENST00000311066 ARID4BQ4LE39 1312 aaPredicted RBP9.11□□□□□ -0.95
PRDM2-202ENST00000311066 MYO15BQ96JP2 1530 aa9.1□□□□□ -0.95
PRDM2-202ENST00000311066 CFDP1Q9UEE9 299 aaPredicted RBP9.1□□□□□ -0.95
PRDM2-202ENST00000311066 CLSPNQ9HAW4 1339 aa9.09□□□□□ -0.95
PRDM2-202ENST00000311066 RTL5Q5HYW3 569 aaPredicted RBP9.09□□□□□ -0.95
PRDM2-202ENST00000311066 CUX2O14529 1486 aa9.09□□□□□ -0.95
PRDM2-202ENST00000311066 CEP164Q9UPV0 1460 aa9.08□□□□□ -0.96
PRDM2-202ENST00000311066 TRHP20396 242 aaPredicted RBP9.08□□□□□ -0.96
PRDM2-202ENST00000311066 PPP1R15AO75807 674 aaPredicted RBP9.08□□□□□ -0.96
PRDM2-202ENST00000311066 CARMIL1Q5VZK9 1371 aa9.07□□□□□ -0.96
PRDM2-202ENST00000311066 MROH2BQ7Z745 1585 aa9.07□□□□□ -0.96
PRDM2-202ENST00000311066 RRP7BPQ9NSQ0 103 aa9.06□□□□□ -0.96
PRDM2-202ENST00000311066 CEP162Q5TB80 1403 aa9.06□□□□□ -0.96
PRDM2-202ENST00000311066 ZBTB47Q9UFB7 747 aaPredicted RBP9.06□□□□□ -0.96
PRDM2-202ENST00000311066 EIF5BO60841 1220 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms