RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 VCANP13611 3396 aa7.28□□□□□ -1.24
SPTBN2-201ENST00000309996 A6NN06 94 aa7.28□□□□□ -1.24
SPTBN2-201ENST00000309996 WDFY3Q8IZQ1 3526 aa7.26□□□□□ -1.25
SPTBN2-201ENST00000309996 LRBAP50851 2863 aa7.25□□□□□ -1.25
SPTBN2-201ENST00000309996 A0A1B0GVY2 172 aa7.25□□□□□ -1.25
SPTBN2-201ENST00000309996 PRO2289Q9P1D8 64 aa7.24□□□□□ -1.25
SPTBN2-201ENST00000309996 NBEAL2Q6ZNJ1 2754 aa7.23□□□□□ -1.25
SPTBN2-201ENST00000309996 DMXL2Q8TDJ6 3036 aa7.22□□□□□ -1.25
SPTBN2-201ENST00000309996 USP34Q70CQ2 3546 aa7.21□□□□□ -1.25
SPTBN2-201ENST00000309996 UTP20O75691 2785 aaKnown RBP7.21□□□□□ -1.26
SPTBN2-201ENST00000309996 IGSF10Q6WRI0 2623 aa7.21□□□□□ -1.26
SPTBN2-201ENST00000309996 ATMQ13315 3056 aa7.17□□□□□ -1.26
SPTBN2-201ENST00000309996 ZZEF1O43149 2961 aa7.17□□□□□ -1.26
SPTBN2-201ENST00000309996 MYO15AQ9UKN7 3530 aa7.16□□□□□ -1.26
SPTBN2-201ENST00000309996 KRTAP10-10P60014 251 aa7.15□□□□□ -1.26
SPTBN2-201ENST00000309996 ITPR1Q14643 2758 aa7.15□□□□□ -1.26
SPTBN2-201ENST00000309996 DMXL1Q9Y485 3027 aa7.15□□□□□ -1.27
SPTBN2-201ENST00000309996 KRTAP11-1Q8IUC1 163 aa7.13□□□□□ -1.27
SPTBN2-201ENST00000309996 ADGRG4Q8IZF6 3080 aa7.1□□□□□ -1.27
SPTBN2-201ENST00000309996 TACC2O95359 2948 aa7.09□□□□□ -1.27
SPTBN2-201ENST00000309996 UBR5O95071 2799 aaPredicted RBP7.09□□□□□ -1.27
SPTBN2-201ENST00000309996 PP632Q6XCG6 107 aa7.07□□□□□ -1.28
SPTBN2-201ENST00000309996 KRTAP13-2Q52LG2 175 aa7.07□□□□□ -1.28
SPTBN2-201ENST00000309996 ASPMQ8IZT6 3477 aa7.06□□□□□ -1.28
SPTBN2-201ENST00000309996 Q6ZRN7 208 aaPredicted RBP7.06□□□□□ -1.28
SPTBN2-201ENST00000309996 NBEAQ8NFP9 2946 aa7.05□□□□□ -1.28
SPTBN2-201ENST00000309996 SPTBN5Q9NRC6 3674 aaKnown RBP7.05□□□□□ -1.28
SPTBN2-201ENST00000309996 DCHS1Q96JQ0 3298 aa6.99□□□□□ -1.29
SPTBN2-201ENST00000309996 TNRC18O15417 2968 aaPredicted RBP6.99□□□□□ -1.29
SPTBN2-201ENST00000309996 LOC400499M0QZD8 3231 aa6.97□□□□□ -1.29
SPTBN2-201ENST00000309996 LAMA5O15230 3695 aa6.96□□□□□ -1.29
SPTBN2-201ENST00000309996 FLNCQ14315 2725 aa6.96□□□□□ -1.3
SPTBN2-201ENST00000309996 KRTAP13-1Q8IUC0 172 aa6.96□□□□□ -1.3
SPTBN2-201ENST00000309996 KRTAP7-1Q8IUC3 87 aa6.95□□□□□ -1.3
SPTBN2-201ENST00000309996 EYSQ5T1H1 3165 aa6.89□□□□□ -1.31
SPTBN2-201ENST00000309996 KRTAP21-3Q3LHN1 58 aa6.87□□□□□ -1.31
SPTBN2-201ENST00000309996 XP32Q5T750 250 aa6.85□□□□□ -1.31
SPTBN2-201ENST00000309996 CELSR1Q9NYQ6 3014 aa6.81□□□□□ -1.32
SPTBN2-201ENST00000309996 CELSR2Q9HCU4 2923 aa6.81□□□□□ -1.32
SPTBN2-201ENST00000309996 RELNP78509 3460 aa6.8□□□□□ -1.32
SPTBN2-201ENST00000309996 HIVEP1P15822 2718 aa6.8□□□□□ -1.32
SPTBN2-201ENST00000309996 ZFHX4Q86UP3 3567 aa6.79□□□□□ -1.32
SPTBN2-201ENST00000309996 TPRXLQ17RH7 258 aa6.78□□□□□ -1.32
SPTBN2-201ENST00000309996 H0YAA0 97 aa6.78□□□□□ -1.32
SPTBN2-201ENST00000309996 TENM1Q9UKZ4 2725 aa6.76□□□□□ -1.33
SPTBN2-201ENST00000309996 CSMD1Q96PZ7 3565 aa6.75□□□□□ -1.33
SPTBN2-201ENST00000309996 NBPF19A0A087WUL8 3843 aa6.71□□□□□ -1.34
SPTBN2-201ENST00000309996 SPENQ96T58 3664 aaKnown RBP6.67□□□□□ -1.34
SPTBN2-201ENST00000309996 DCHS2Q6V1P9 2916 aa6.65□□□□□ -1.34
SPTBN2-201ENST00000309996 NF1P21359 2839 aa6.64□□□□□ -1.35
SPTBN2-201ENST00000309996 NIPBLQ6KC79 2804 aaeCLIP6.63□□□□□ -1.352e-6■■■■■ 44.5
SPTBN2-201ENST00000309996 ZANQ9Y493 2812 aa6.63□□□□□ -1.35
SPTBN2-201ENST00000309996 TENM3Q9P273 2699 aa6.63□□□□□ -1.35
SPTBN2-201ENST00000309996 DMDP11532 3685 aa6.62□□□□□ -1.35
SPTBN2-201ENST00000309996 KRTAP1-4P0C5Y4 121 aa6.61□□□□□ -1.35
SPTBN2-201ENST00000309996 SMG1Q96Q15 3661 aaKnown RBP6.61□□□□□ -1.35
SPTBN2-201ENST00000309996 TENM4Q6N022 2769 aa6.6□□□□□ -1.35
SPTBN2-201ENST00000309996 PDZD2O15018 2839 aa6.55□□□□□ -1.36
SPTBN2-201ENST00000309996 FBN2P35556 2912 aa6.54□□□□□ -1.36
SPTBN2-201ENST00000309996 KRTAP12-2P59991 146 aa6.52□□□□□ -1.37
SPTBN2-201ENST00000309996 CUBNO60494 3623 aa6.49□□□□□ -1.37
SPTBN2-201ENST00000309996 KRTAP13-3Q3SY46 172 aa6.48□□□□□ -1.37
SPTBN2-201ENST00000309996 TGP01266 2768 aa6.48□□□□□ -1.37
SPTBN2-201ENST00000309996 HRNRQ86YZ3 2850 aaPredicted RBP6.48□□□□□ -1.37
SPTBN2-201ENST00000309996 KRTAP15-1Q3LI76 137 aa6.44□□□□□ -1.38
SPTBN2-201ENST00000309996 SRRM2Q9UQ35 2752 aaKnown RBP6.44□□□□□ -1.38
SPTBN2-201ENST00000309996 CRCT1Q9UGL9 99 aa6.39□□□□□ -1.39
SPTBN2-201ENST00000309996 KRTAP13-4Q3LI77 160 aa6.36□□□□□ -1.39
SPTBN2-201ENST00000309996 VWFP04275 2813 aa6.32□□□□□ -1.4
SPTBN2-201ENST00000309996 PKD1L1Q8TDX9 2849 aa6.31□□□□□ -1.4
SPTBN2-201ENST00000309996 SVEP1Q4LDE5 3571 aa6.31□□□□□ -1.4
SPTBN2-201ENST00000309996 MXRA5Q9NR99 2828 aa6.3□□□□□ -1.4
SPTBN2-201ENST00000309996 ZFHX3Q15911 3703 aa6.27□□□□□ -1.41
SPTBN2-201ENST00000309996 KRTAP12-1P59990 96 aa6.21□□□□□ -1.42
SPTBN2-201ENST00000309996 MUC3AQ02505 3323 aa6.19□□□□□ -1.42
SPTBN2-201ENST00000309996 TENM2Q9NT68 2774 aa6.16□□□□□ -1.42
SPTBN2-201ENST00000309996 VPS13CQ709C8 3753 aa6.15□□□□□ -1.43
SPTBN2-201ENST00000309996 CSMD2Q7Z408 3487 aa6.14□□□□□ -1.43
SPTBN2-201ENST00000309996 COL7A1Q02388 2944 aa6.14□□□□□ -1.43
SPTBN2-201ENST00000309996 MEGF8Q7Z7M0 2845 aa6.02□□□□□ -1.45
SPTBN2-201ENST00000309996 INE1O15225 51 aa6.01□□□□□ -1.45
SPTBN2-201ENST00000309996 CSMD3Q7Z407 3707 aa6.01□□□□□ -1.45
SPTBN2-201ENST00000309996 FBN1P35555 2871 aaKnown RBP6.01□□□□□ -1.45
SPTBN2-201ENST00000309996 KRTAP10-12P60413 245 aa5.98□□□□□ -1.45
SPTBN2-201ENST00000309996 KRTAP10-6P60371 365 aaPredicted RBP5.96□□□□□ -1.46
SPTBN2-201ENST00000309996 KRTAP3-1Q9BYR8 98 aa5.92□□□□□ -1.46
SPTBN2-201ENST00000309996 TRRAPQ9Y4A5 3859 aa5.9□□□□□ -1.47
SPTBN2-201ENST00000309996 OTOGQ6ZRI0 2925 aa5.87□□□□□ -1.47
SPTBN2-201ENST00000309996 AKAP9Q99996 3911 aa5.87□□□□□ -1.47
SPTBN2-201ENST00000309996 BSNQ9UPA5 3926 aa5.82□□□□□ -1.48
SPTBN2-201ENST00000309996 FBN3Q75N90 2809 aa5.8□□□□□ -1.48
SPTBN2-201ENST00000309996 LORP23490 312 aaPredicted RBP5.77□□□□□ -1.49
SPTBN2-201ENST00000309996 KRTAP10-5P60370 271 aa5.76□□□□□ -1.49
SPTBN2-201ENST00000309996 KRTAP8-1Q8IUC2 63 aa5.72□□□□□ -1.49
SPTBN2-201ENST00000309996 KRTAP12-3P60328 96 aa5.69□□□□□ -1.5
SPTBN2-201ENST00000309996 ANK3Q12955 4377 aaKnown RBP5.59□□□□□ -1.51
SPTBN2-201ENST00000309996 LCE3AQ5TA76 89 aa5.55□□□□□ -1.52
SPTBN2-201ENST00000309996 KRTAP3-2Q9BYR7 98 aa5.54□□□□□ -1.52
SPTBN2-201ENST00000309996 KRTAP3-3Q9BYR6 98 aa5.53□□□□□ -1.52
SPTBN2-201ENST00000309996 KRTAP23-1A1A580 65 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms