RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 PMAIP1Q13794 54 aa9.89□□□□□ -0.83
SSH3-201ENST00000308127 A0A087WTM6 91 aa9.88□□□□□ -0.83
SSH3-201ENST00000308127 RTL8CO15255 209 aa9.87□□□□□ -0.83
SSH3-201ENST00000308127 LIMD2Q9BT23 127 aa9.86□□□□□ -0.83
SSH3-201ENST00000308127 RETNLBQ9BQ08 111 aa9.86□□□□□ -0.83
SSH3-201ENST00000308127 LCA10Q71F78 164 aa9.85□□□□□ -0.83
SSH3-201ENST00000308127 CIRBP-AS1Q8TBR5 109 aa9.85□□□□□ -0.83
SSH3-201ENST00000308127 IGLV5-52A0A0A0MRZ9 124 aa9.84□□□□□ -0.83
SSH3-201ENST00000308127 MRPL34Q9BQ48 92 aaKnown RBP9.84□□□□□ -0.83
SSH3-201ENST00000308127 ASB16-AS1Q495Z4 193 aa9.84□□□□□ -0.83
SSH3-201ENST00000308127 Q5W150 140 aa9.83□□□□□ -0.84
SSH3-201ENST00000308127 DNAH11Q96DT5 4516 aa9.83□□□□□ -0.84
SSH3-201ENST00000308127 LINC00483Q53H64 154 aa9.82□□□□□ -0.84
SSH3-201ENST00000308127 HRES1P13985 223 aa9.82□□□□□ -0.84
SSH3-201ENST00000308127 TP53AIP1Q9HCN2 124 aa9.81□□□□□ -0.84
SSH3-201ENST00000308127 Q6ZR54 194 aa9.81□□□□□ -0.84
SSH3-201ENST00000308127 NUPR2A6NF83 97 aa9.8□□□□□ -0.84
SSH3-201ENST00000308127 ZNF861PO60384 105 aa9.8□□□□□ -0.84
SSH3-201ENST00000308127 PRR26Q8N8Z3 221 aa9.8□□□□□ -0.84
SSH3-201ENST00000308127 SEC61GP60059 68 aa9.79□□□□□ -0.84
SSH3-201ENST00000308127 ALMS1Q8TCU4 4167 aa9.78□□□□□ -0.84
SSH3-201ENST00000308127 ZNF706Q9Y5V0 76 aaPredicted RBP9.77□□□□□ -0.85
SSH3-201ENST00000308127 SPINK7P58062 85 aa9.75□□□□□ -0.85
SSH3-201ENST00000308127 Q75L30 129 aa9.75□□□□□ -0.85
SSH3-201ENST00000308127 LOC101927531A0A1B0GV80 90 aa9.73□□□□□ -0.85
SSH3-201ENST00000308127 DNAH5Q8TE73 4624 aa9.72□□□□□ -0.85
SSH3-201ENST00000308127 DNHD1Q96M86 4753 aa9.72□□□□□ -0.85
SSH3-201ENST00000308127 PLAC8Q9NZF1 115 aa9.7□□□□□ -0.86
SSH3-201ENST00000308127 LRP1BQ9NZR2 4599 aa9.7□□□□□ -0.86
SSH3-201ENST00000308127 IGLV7-43P04211 117 aa9.68□□□□□ -0.86
SSH3-201ENST00000308127 LINC01558Q9Y6Z2 57 aa9.67□□□□□ -0.86
SSH3-201ENST00000308127 LY6G6CO95867 125 aa9.64□□□□□ -0.87
SSH3-201ENST00000308127 CDC42SE1Q9NRR8 79 aa9.62□□□□□ -0.87
SSH3-201ENST00000308127 KRTAP13-3Q3SY46 172 aa9.61□□□□□ -0.87
SSH3-201ENST00000308127 KRTAP10-2P60368 255 aa9.61□□□□□ -0.87
SSH3-201ENST00000308127 C1orf134Q5TEV5 83 aa9.61□□□□□ -0.87
SSH3-201ENST00000308127 ATP11AUNQ6ZP68 121 aa9.61□□□□□ -0.87
SSH3-201ENST00000308127 HYDINQ4G0P3 5121 aa9.57□□□□□ -0.88
SSH3-201ENST00000308127 A6NN06 94 aa9.57□□□□□ -0.88
SSH3-201ENST00000308127 KTN1-AS1Q86SY8 53 aa9.57□□□□□ -0.88
SSH3-201ENST00000308127 LINC00313P59037 77 aa9.56□□□□□ -0.88
SSH3-201ENST00000308127 KRTAP13-2Q52LG2 175 aa9.54□□□□□ -0.88
SSH3-201ENST00000308127 VPS13BQ7Z7G8 4022 aa9.54□□□□□ -0.88
SSH3-201ENST00000308127 FAT2Q9NYQ8 4349 aa9.53□□□□□ -0.88
SSH3-201ENST00000308127 IGKV2D-30A0A075B6S6 120 aa9.52□□□□□ -0.89
SSH3-201ENST00000308127 IGKV2-30P06310 120 aa9.52□□□□□ -0.89
SSH3-201ENST00000308127 ACYP2P14621 99 aa9.52□□□□□ -0.89
SSH3-201ENST00000308127 RBM12B-AS1Q9P1G2 102 aa9.49□□□□□ -0.89
SSH3-201ENST00000308127 SSBP3-AS1Q7Z2R9 100 aa9.47□□□□□ -0.89
SSH3-201ENST00000308127 C8orf87E5RJ46 101 aa9.45□□□□□ -0.9
SSH3-201ENST00000308127 PKD1P98161 4303 aa9.45□□□□□ -0.9
SSH3-201ENST00000308127 KRTAP10-1P60331 282 aa9.44□□□□□ -0.9
SSH3-201ENST00000308127 DMAC1Q96GE9 116 aa9.44□□□□□ -0.9
SSH3-201ENST00000308127 FAM229AH3BQW9 127 aa9.43□□□□□ -0.9
SSH3-201ENST00000308127 PRAC1Q96KF2 57 aa9.42□□□□□ -0.9
SSH3-201ENST00000308127 A0A1B0GU69 56 aa9.41□□□□□ -0.9
SSH3-201ENST00000308127 ADM2Q7Z4H4 148 aa9.41□□□□□ -0.9
SSH3-201ENST00000308127 SPINK1P00995 79 aa9.4□□□□□ -0.9
SSH3-201ENST00000308127 PKHD1P08F94 4074 aa9.4□□□□□ -0.9
SSH3-201ENST00000308127 C7orf65Q6ZTY9 151 aa9.38□□□□□ -0.91
SSH3-201ENST00000308127 KRTAP16-1A8MUX0 517 aa9.38□□□□□ -0.91
SSH3-201ENST00000308127 Q8N1X5 172 aa9.34□□□□□ -0.91
SSH3-201ENST00000308127 KRTAP1-4P0C5Y4 121 aa9.34□□□□□ -0.92
SSH3-201ENST00000308127 PLA2G1BP04054 148 aaKnown RBP9.32□□□□□ -0.92
SSH3-201ENST00000308127 FAT1Q14517 4588 aa9.28□□□□□ -0.92
SSH3-201ENST00000308127 C4orf48Q5BLP8 95 aa9.28□□□□□ -0.92
SSH3-201ENST00000308127 TYMSOSQ8TAI1 123 aa9.27□□□□□ -0.93
SSH3-201ENST00000308127 MIR22HGQ0VDD5 57 aa9.24□□□□□ -0.93
SSH3-201ENST00000308127 Q6ZSA8 131 aa9.23□□□□□ -0.93
SSH3-201ENST00000308127 SMR3BP02814 79 aaPredicted RBP9.21□□□□□ -0.93
SSH3-201ENST00000308127 C9orf92A6NGG3 77 aa9.21□□□□□ -0.94
SSH3-201ENST00000308127 UQCR11O14957 56 aa9.19□□□□□ -0.94
SSH3-201ENST00000308127 SPATA8Q6RVD6 105 aa9.18□□□□□ -0.94
SSH3-201ENST00000308127 DYNC1H1Q14204 4646 aaKnown RBP9.14□□□□□ -0.95
SSH3-201ENST00000308127 LINC00304Q8N9R0 145 aa9.1□□□□□ -0.95
SSH3-201ENST00000308127 FLG2Q5D862 2391 aaPredicted RBP9.1□□□□□ -0.95
SSH3-201ENST00000308127 SACSQ9NZJ4 4579 aa9.09□□□□□ -0.95
SSH3-201ENST00000308127 CSAG1Q6PB30 78 aa9.02□□□□□ -0.97
SSH3-201ENST00000308127 KRTAP3-1Q9BYR8 98 aa8.97□□□□□ -0.97
SSH3-201ENST00000308127 H0YAA0 97 aa8.96□□□□□ -0.97
SSH3-201ENST00000308127 DMBT1Q9UGM3 2413 aaPredicted RBP8.96□□□□□ -0.97
SSH3-201ENST00000308127 MYCBP2O75592 4640 aa8.95□□□□□ -0.98
SSH3-201ENST00000308127 APOBP04114 4563 aaKnown RBP8.95□□□□□ -0.98
SSH3-201ENST00000308127 LRP1Q07954 4544 aaKnown RBP8.94□□□□□ -0.98
SSH3-201ENST00000308127 LINC01554Q52M75 96 aa8.93□□□□□ -0.98
SSH3-201ENST00000308127 PKHD1L1Q86WI1 4243 aa8.87□□□□□ -0.99
SSH3-201ENST00000308127 CRIPTQ9P021 101 aa8.86□□□□□ -0.99
SSH3-201ENST00000308127 A0A1B0GU33 70 aa8.85□□□□□ -0.99
SSH3-201ENST00000308127 A8MUU9 505 aa8.84□□□□□ -0.99
SSH3-201ENST00000308127 HSPG2P98160 4391 aa8.84□□□□□ -1
SSH3-201ENST00000308127 C20orf166-AS1Q96NR2 134 aa8.83□□□□□ -1
SSH3-201ENST00000308127 KMT2CQ8NEZ4 4911 aaKnown RBP8.81□□□□□ -1
SSH3-201ENST00000308127 H1FX-AS1Q4G0G2 97 aa8.78□□□□□ -1
SSH3-201ENST00000308127 RPS29P62273 56 aaKnown RBP8.76□□□□□ -1.01
SSH3-201ENST00000308127 FAT3Q8TDW7 4589 aa8.75□□□□□ -1.01
SSH3-201ENST00000308127 KRTAP10-4P60372 401 aaPredicted RBP8.75□□□□□ -1.01
SSH3-201ENST00000308127 COX6B2Q6YFQ2 88 aa8.69□□□□□ -1.02
SSH3-201ENST00000308127 RYR2Q92736 4967 aa8.68□□□□□ -1.02
SSH3-201ENST00000308127 A0A0D9SG42 100 aa8.66□□□□□ -1.02
SSH3-201ENST00000308127 A0A1B0GVY2 172 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms