RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 PLAC8Q9NZF1 115 aa7.99□□□□□ -1.13
DDX54-201ENST00000306014 LINC00304Q8N9R0 145 aa7.99□□□□□ -1.13
DDX54-201ENST00000306014 SPINK7P58062 85 aa7.98□□□□□ -1.13
DDX54-201ENST00000306014 TENM3Q9P273 2699 aa7.96□□□□□ -1.13
DDX54-201ENST00000306014 SMR3BP02814 79 aaPredicted RBP7.96□□□□□ -1.14
DDX54-201ENST00000306014 RBM12B-AS1Q9P1G2 102 aa7.96□□□□□ -1.14
DDX54-201ENST00000306014 NBPF19A0A087WUL8 3843 aa7.95□□□□□ -1.14
DDX54-201ENST00000306014 TENM1Q9UKZ4 2725 aa7.95□□□□□ -1.14
DDX54-201ENST00000306014 KRTAP21-3Q3LHN1 58 aa7.94□□□□□ -1.14
DDX54-201ENST00000306014 Q5W150 140 aa7.93□□□□□ -1.14
DDX54-201ENST00000306014 VWFP04275 2813 aa7.91□□□□□ -1.14
DDX54-201ENST00000306014 A0A087X002 238 aa7.91□□□□□ -1.14
DDX54-201ENST00000306014 Q6ZR54 194 aa7.91□□□□□ -1.14
DDX54-201ENST00000306014 NOTCH2NLQ7Z3S9 236 aa7.91□□□□□ -1.14
DDX54-201ENST00000306014 LINC00483Q53H64 154 aa7.9□□□□□ -1.15
DDX54-201ENST00000306014 PRAC1Q96KF2 57 aa7.88□□□□□ -1.15
DDX54-201ENST00000306014 A8MU10 97 aa7.86□□□□□ -1.15
DDX54-201ENST00000306014 FBN1P35555 2871 aaKnown RBP7.82□□□□□ -1.16
DDX54-201ENST00000306014 DMBT1Q9UGM3 2413 aaPredicted RBP7.81□□□□□ -1.16
DDX54-201ENST00000306014 DMAC1Q96GE9 116 aa7.79□□□□□ -1.16
DDX54-201ENST00000306014 Q6ZRN7 208 aaPredicted RBP7.79□□□□□ -1.16
DDX54-201ENST00000306014 KRTAP13-1Q8IUC0 172 aa7.78□□□□□ -1.16
DDX54-201ENST00000306014 KRTAP10-2P60368 255 aa7.78□□□□□ -1.16
DDX54-201ENST00000306014 ZNF469Q96JG9 3925 aaPredicted RBP7.74□□□□□ -1.17
DDX54-201ENST00000306014 A0A1B0GU33 70 aa7.73□□□□□ -1.17
DDX54-201ENST00000306014 KRTAP10-1P60331 282 aa7.72□□□□□ -1.17
DDX54-201ENST00000306014 A0A0D9SG42 100 aa7.72□□□□□ -1.17
DDX54-201ENST00000306014 SPINT4Q6UDR6 99 aa7.72□□□□□ -1.17
DDX54-201ENST00000306014 LINC01554Q52M75 96 aa7.72□□□□□ -1.17
DDX54-201ENST00000306014 PKD1L1Q8TDX9 2849 aa7.71□□□□□ -1.18
DDX54-201ENST00000306014 A6NN06 94 aa7.67□□□□□ -1.18
DDX54-201ENST00000306014 CSAG1Q6PB30 78 aa7.67□□□□□ -1.18
DDX54-201ENST00000306014 J3QL48 77 aa7.66□□□□□ -1.18
DDX54-201ENST00000306014 CRIPTQ9P021 101 aa7.61□□□□□ -1.19
DDX54-201ENST00000306014 ASB16-AS1Q495Z4 193 aa7.59□□□□□ -1.19
DDX54-201ENST00000306014 ANK3Q12955 4377 aaKnown RBP7.58□□□□□ -1.2
DDX54-201ENST00000306014 KRTAP13-2Q52LG2 175 aa7.58□□□□□ -1.2
DDX54-201ENST00000306014 SPATA8Q6RVD6 105 aa7.58□□□□□ -1.2
DDX54-201ENST00000306014 AKAP9Q99996 3911 aa7.58□□□□□ -1.2
DDX54-201ENST00000306014 FLG2Q5D862 2391 aaPredicted RBP7.58□□□□□ -1.2
DDX54-201ENST00000306014 TENM2Q9NT68 2774 aa7.55□□□□□ -1.2
DDX54-201ENST00000306014 ADM2Q7Z4H4 148 aa7.55□□□□□ -1.2
DDX54-201ENST00000306014 TGP01266 2768 aa7.54□□□□□ -1.2
DDX54-201ENST00000306014 TRRAPQ9Y4A5 3859 aa7.49□□□□□ -1.21
DDX54-201ENST00000306014 H1FX-AS1Q4G0G2 97 aa7.47□□□□□ -1.21
DDX54-201ENST00000306014 Q5VSD8 79 aa7.45□□□□□ -1.22
DDX54-201ENST00000306014 SRRM2Q9UQ35 2752 aaKnown RBP7.43□□□□□ -1.22
DDX54-201ENST00000306014 H3BS24 57 aa7.42□□□□□ -1.22
DDX54-201ENST00000306014 S4R3F8 94 aa7.4□□□□□ -1.22
DDX54-201ENST00000306014 COX6B2Q6YFQ2 88 aa7.4□□□□□ -1.22
DDX54-201ENST00000306014 RPL37P61927 97 aaKnown RBP7.38□□□□□ -1.23
DDX54-201ENST00000306014 Q6ZSA8 131 aa7.38□□□□□ -1.23
DDX54-201ENST00000306014 ROMO1P60602 79 aa7.33□□□□□ -1.24
DDX54-201ENST00000306014 RPS29P62273 56 aaKnown RBP7.31□□□□□ -1.24
DDX54-201ENST00000306014 KRTAP1-4P0C5Y4 121 aa7.31□□□□□ -1.24
DDX54-201ENST00000306014 FBN3Q75N90 2809 aa7.27□□□□□ -1.25
DDX54-201ENST00000306014 KRTAP25-1Q3LHN0 102 aa7.26□□□□□ -1.25
DDX54-201ENST00000306014 KRTAP16-1A8MUX0 517 aa7.25□□□□□ -1.25
DDX54-201ENST00000306014 KRTAP13-3Q3SY46 172 aa7.25□□□□□ -1.25
DDX54-201ENST00000306014 A8MUU9 505 aa7.21□□□□□ -1.26
DDX54-201ENST00000306014 C20orf166-AS1Q96NR2 134 aa7.19□□□□□ -1.26
DDX54-201ENST00000306014 R4GN34 69 aa7.19□□□□□ -1.26
DDX54-201ENST00000306014 CAMK2N1Q7Z7J9 78 aa7.16□□□□□ -1.26
DDX54-201ENST00000306014 H0YAA0 97 aa7.15□□□□□ -1.27
DDX54-201ENST00000306014 M0QZ58 72 aa7.12□□□□□ -1.27
DDX54-201ENST00000306014 MEGF8Q7Z7M0 2845 aa7.1□□□□□ -1.27
DDX54-201ENST00000306014 LUZP6Q538Z0 58 aa7.08□□□□□ -1.28
DDX54-201ENST00000306014 COL7A1Q02388 2944 aa7.07□□□□□ -1.28
DDX54-201ENST00000306014 CSMD3Q7Z407 3707 aa7.05□□□□□ -1.28
DDX54-201ENST00000306014 SEC61BP60468 96 aaKnown RBP7.01□□□□□ -1.29
DDX54-201ENST00000306014 A0A1B0GVY2 172 aa6.99□□□□□ -1.29
DDX54-201ENST00000306014 C10orf95Q9H7T3 257 aa6.94□□□□□ -1.3
DDX54-201ENST00000306014 ANK2Q01484 3957 aa6.93□□□□□ -1.3
DDX54-201ENST00000306014 HUWE1Q7Z6Z7 4374 aaKnown RBP6.92□□□□□ -1.3
DDX54-201ENST00000306014 XP32Q5T750 250 aa6.92□□□□□ -1.3
DDX54-201ENST00000306014 NDUFAF8A1L188 74 aa6.91□□□□□ -1.3
DDX54-201ENST00000306014 M0R2T5 61 aa6.85□□□□□ -1.31
DDX54-201ENST00000306014 P0C880 135 aa6.85□□□□□ -1.31
DDX54-201ENST00000306014 KRTAP3-1Q9BYR8 98 aa6.83□□□□□ -1.32
DDX54-201ENST00000306014 CMYA5Q8N3K9 4069 aa6.8□□□□□ -1.32
DDX54-201ENST00000306014 DNAH10Q8IVF4 4471 aa6.79□□□□□ -1.32
DDX54-201ENST00000306014 DNHD1Q96M86 4753 aa6.78□□□□□ -1.32
DDX54-201ENST00000306014 A0A0A0MQY5 61 aa6.75□□□□□ -1.33
DDX54-201ENST00000306014 DNAH9Q9NYC9 4486 aa6.73□□□□□ -1.33
DDX54-201ENST00000306014 KRTAP10-8P60410 259 aa6.71□□□□□ -1.33
DDX54-201ENST00000306014 DNAH3Q8TD57 4116 aa6.71□□□□□ -1.34
DDX54-201ENST00000306014 LYSTQ99698 3801 aa6.7□□□□□ -1.34
DDX54-201ENST00000306014 PLECQ15149 4684 aaKnown RBP6.65□□□□□ -1.34
DDX54-201ENST00000306014 KRTAP12-2P59991 146 aa6.64□□□□□ -1.35
DDX54-201ENST00000306014 TPRXLQ17RH7 258 aa6.63□□□□□ -1.35
DDX54-201ENST00000306014 DNAH1Q9P2D7 4330 aa6.62□□□□□ -1.35
DDX54-201ENST00000306014 KRTAP13-4Q3LI77 160 aa6.6□□□□□ -1.35
DDX54-201ENST00000306014 PLAC4Q8WY50 150 aa6.6□□□□□ -1.35
DDX54-201ENST00000306014 KRTAP10-6P60371 365 aaPredicted RBP6.59□□□□□ -1.36
DDX54-201ENST00000306014 DNAH7Q8WXX0 4024 aa6.55□□□□□ -1.36
DDX54-201ENST00000306014 STARD9Q9P2P6 4700 aa6.54□□□□□ -1.36
DDX54-201ENST00000306014 KRTAP12-1P59990 96 aa6.53□□□□□ -1.36
DDX54-201ENST00000306014 TNP1P09430 55 aa6.53□□□□□ -1.36
DDX54-201ENST00000306014 PRKDCP78527 4128 aaKnown RBP6.5□□□□□ -1.37
DDX54-201ENST00000306014 PP632Q6XCG6 107 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms