RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 LRBAP50851 2863 aa7.84□□□□□ -1.16
PRKCB-201ENST00000303531 SZT2Q5T011 3432 aa7.83□□□□□ -1.16
PRKCB-201ENST00000303531 ADGRG4Q8IZF6 3080 aa7.79□□□□□ -1.16
PRKCB-201ENST00000303531 COL12A1Q99715 3063 aa7.79□□□□□ -1.16
PRKCB-201ENST00000303531 KRTAP25-1Q3LHN0 102 aa7.79□□□□□ -1.16
PRKCB-201ENST00000303531 BOD1L1Q8NFC6 3051 aa7.78□□□□□ -1.16
PRKCB-201ENST00000303531 A8MUU9 505 aa7.77□□□□□ -1.16
PRKCB-201ENST00000303531 HIVEP1P15822 2718 aa7.75□□□□□ -1.17
PRKCB-201ENST00000303531 COL6A3P12111 3177 aa7.74□□□□□ -1.17
PRKCB-201ENST00000303531 REV3LO60673 3130 aa7.74□□□□□ -1.17
PRKCB-201ENST00000303531 CELSR2Q9HCU4 2923 aa7.71□□□□□ -1.17
PRKCB-201ENST00000303531 CRYBG3Q68DQ2 2970 aa7.7□□□□□ -1.18
PRKCB-201ENST00000303531 ZZEF1O43149 2961 aa7.69□□□□□ -1.18
PRKCB-201ENST00000303531 NIPBLQ6KC79 2804 aaeCLIP7.67□□□□□ -1.184e-6■■■□□ 14.9
PRKCB-201ENST00000303531 CFAP47Q6ZTR5 3102 aa7.64□□□□□ -1.19
PRKCB-201ENST00000303531 C20orf166-AS1Q96NR2 134 aa7.62□□□□□ -1.19
PRKCB-201ENST00000303531 KRTAP16-1A8MUX0 517 aa7.59□□□□□ -1.19
PRKCB-201ENST00000303531 DCHS2Q6V1P9 2916 aa7.56□□□□□ -1.2
PRKCB-201ENST00000303531 TENM4Q6N022 2769 aa7.56□□□□□ -1.2
PRKCB-201ENST00000303531 NDUFAF8A1L188 74 aa7.54□□□□□ -1.2
PRKCB-201ENST00000303531 EYSQ5T1H1 3165 aa7.51□□□□□ -1.21
PRKCB-201ENST00000303531 ZANQ9Y493 2812 aa7.51□□□□□ -1.21
PRKCB-201ENST00000303531 USP34Q70CQ2 3546 aa7.49□□□□□ -1.21
PRKCB-201ENST00000303531 KRTAP1-4P0C5Y4 121 aa7.49□□□□□ -1.21
PRKCB-201ENST00000303531 TNP1P09430 55 aa7.48□□□□□ -1.21
PRKCB-201ENST00000303531 SPEGQ15772 3267 aa7.46□□□□□ -1.22
PRKCB-201ENST00000303531 NF1P21359 2839 aa7.44□□□□□ -1.22
PRKCB-201ENST00000303531 TENM1Q9UKZ4 2725 aa7.44□□□□□ -1.22
PRKCB-201ENST00000303531 SPTBN5Q9NRC6 3674 aaKnown RBP7.44□□□□□ -1.22
PRKCB-201ENST00000303531 TNRC18O15417 2968 aaPredicted RBP7.43□□□□□ -1.22
PRKCB-201ENST00000303531 XP32Q5T750 250 aa7.42□□□□□ -1.22
PRKCB-201ENST00000303531 TENM3Q9P273 2699 aa7.41□□□□□ -1.22
PRKCB-201ENST00000303531 KRTAP21-3Q3LHN1 58 aa7.4□□□□□ -1.22
PRKCB-201ENST00000303531 C10orf95Q9H7T3 257 aa7.4□□□□□ -1.23
PRKCB-201ENST00000303531 HRNRQ86YZ3 2850 aaPredicted RBP7.39□□□□□ -1.23
PRKCB-201ENST00000303531 FBN2P35556 2912 aa7.38□□□□□ -1.23
PRKCB-201ENST00000303531 H0YAA0 97 aa7.36□□□□□ -1.23
PRKCB-201ENST00000303531 DMXL1Q9Y485 3027 aa7.34□□□□□ -1.23
PRKCB-201ENST00000303531 PP632Q6XCG6 107 aa7.28□□□□□ -1.24
PRKCB-201ENST00000303531 A0A1B0GVY2 172 aa7.28□□□□□ -1.24
PRKCB-201ENST00000303531 LOC400499M0QZD8 3231 aa7.27□□□□□ -1.25
PRKCB-201ENST00000303531 CELSR1Q9NYQ6 3014 aa7.26□□□□□ -1.25
PRKCB-201ENST00000303531 KRTAP10-8P60410 259 aa7.26□□□□□ -1.25
PRKCB-201ENST00000303531 TPRXLQ17RH7 258 aa7.22□□□□□ -1.25
PRKCB-201ENST00000303531 TGP01266 2768 aa7.18□□□□□ -1.26
PRKCB-201ENST00000303531 P0C880 135 aa7.18□□□□□ -1.26
PRKCB-201ENST00000303531 KRTAP13-3Q3SY46 172 aa7.15□□□□□ -1.26
PRKCB-201ENST00000303531 MYO15AQ9UKN7 3530 aa7.15□□□□□ -1.26
PRKCB-201ENST00000303531 PKD1L1Q8TDX9 2849 aa7.13□□□□□ -1.27
PRKCB-201ENST00000303531 PDZD2O15018 2839 aa7.1□□□□□ -1.27
PRKCB-201ENST00000303531 MXRA5Q9NR99 2828 aa7.1□□□□□ -1.27
PRKCB-201ENST00000303531 TENM2Q9NT68 2774 aa7.09□□□□□ -1.27
PRKCB-201ENST00000303531 KRTAP10-10P60014 251 aa7.07□□□□□ -1.28
PRKCB-201ENST00000303531 VWFP04275 2813 aa7.04□□□□□ -1.28
PRKCB-201ENST00000303531 WDFY3Q8IZQ1 3526 aa7.03□□□□□ -1.28
PRKCB-201ENST00000303531 RELNP78509 3460 aa7□□□□□ -1.29
PRKCB-201ENST00000303531 PRO2289Q9P1D8 64 aa6.95□□□□□ -1.3
PRKCB-201ENST00000303531 KRTAP12-2P59991 146 aa6.92□□□□□ -1.3
PRKCB-201ENST00000303531 DCHS1Q96JQ0 3298 aa6.91□□□□□ -1.3
PRKCB-201ENST00000303531 ASPMQ8IZT6 3477 aa6.88□□□□□ -1.31
PRKCB-201ENST00000303531 ZFHX4Q86UP3 3567 aa6.85□□□□□ -1.31
PRKCB-201ENST00000303531 SRRM2Q9UQ35 2752 aaKnown RBP6.78□□□□□ -1.32
PRKCB-201ENST00000303531 NBPF19A0A087WUL8 3843 aa6.78□□□□□ -1.32
PRKCB-201ENST00000303531 KRTAP12-1P59990 96 aa6.78□□□□□ -1.32
PRKCB-201ENST00000303531 KRTAP3-1Q9BYR8 98 aa6.77□□□□□ -1.33
PRKCB-201ENST00000303531 LAMA5O15230 3695 aa6.77□□□□□ -1.33
PRKCB-201ENST00000303531 CSMD1Q96PZ7 3565 aa6.76□□□□□ -1.33
PRKCB-201ENST00000303531 KRTAP13-4Q3LI77 160 aa6.76□□□□□ -1.33
PRKCB-201ENST00000303531 FBN1P35555 2871 aaKnown RBP6.75□□□□□ -1.33
PRKCB-201ENST00000303531 ZFHX3Q15911 3703 aa6.66□□□□□ -1.34
PRKCB-201ENST00000303531 COL7A1Q02388 2944 aa6.63□□□□□ -1.35
PRKCB-201ENST00000303531 SMG1Q96Q15 3661 aaKnown RBP6.61□□□□□ -1.35
PRKCB-201ENST00000303531 FBN3Q75N90 2809 aa6.6□□□□□ -1.35
PRKCB-201ENST00000303531 MEGF8Q7Z7M0 2845 aa6.59□□□□□ -1.35
PRKCB-201ENST00000303531 KRTAP10-6P60371 365 aaPredicted RBP6.58□□□□□ -1.36
PRKCB-201ENST00000303531 OTOGQ6ZRI0 2925 aa6.58□□□□□ -1.36
PRKCB-201ENST00000303531 DMDP11532 3685 aa6.54□□□□□ -1.36
PRKCB-201ENST00000303531 ANK3Q12955 4377 aaKnown RBP6.51□□□□□ -1.37
PRKCB-201ENST00000303531 SVEP1Q4LDE5 3571 aa6.49□□□□□ -1.37
PRKCB-201ENST00000303531 KRTAP15-1Q3LI76 137 aa6.46□□□□□ -1.38
PRKCB-201ENST00000303531 CUBNO60494 3623 aa6.41□□□□□ -1.38
PRKCB-201ENST00000303531 CSMD2Q7Z408 3487 aa6.39□□□□□ -1.39
PRKCB-201ENST00000303531 MT1HL1P0DM35 61 aa6.36□□□□□ -1.39
PRKCB-201ENST00000303531 TRRAPQ9Y4A5 3859 aa6.36□□□□□ -1.39
PRKCB-201ENST00000303531 MUC3AQ02505 3323 aa6.36□□□□□ -1.39
PRKCB-201ENST00000303531 KRTAP3-2Q9BYR7 98 aa6.34□□□□□ -1.39
PRKCB-201ENST00000303531 KRTAP3-3Q9BYR6 98 aa6.34□□□□□ -1.39
PRKCB-201ENST00000303531 SPENQ96T58 3664 aaKnown RBP6.33□□□□□ -1.4
PRKCB-201ENST00000303531 KRTAP10-4P60372 401 aaPredicted RBP6.21□□□□□ -1.42
PRKCB-201ENST00000303531 HUWE1Q7Z6Z7 4374 aaKnown RBP6.19□□□□□ -1.42
PRKCB-201ENST00000303531 KRTAP10-12P60413 245 aa6.18□□□□□ -1.42
PRKCB-201ENST00000303531 KRTAP4-5Q9BYR2 181 aa6.13□□□□□ -1.43
PRKCB-201ENST00000303531 BSNQ9UPA5 3926 aa6.13□□□□□ -1.43
PRKCB-201ENST00000303531 INE1O15225 51 aa6.09□□□□□ -1.43
PRKCB-201ENST00000303531 CRCT1Q9UGL9 99 aa6.06□□□□□ -1.44
PRKCB-201ENST00000303531 VPS13CQ709C8 3753 aa6.06□□□□□ -1.44
PRKCB-201ENST00000303531 KRTAP12-3P60328 96 aa6.02□□□□□ -1.45
PRKCB-201ENST00000303531 LORP23490 312 aaPredicted RBP5.98□□□□□ -1.45
PRKCB-201ENST00000303531 LCE3AQ5TA76 89 aa5.98□□□□□ -1.45
PRKCB-201ENST00000303531 ALMS1Q8TCU4 4167 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms