RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 S4R3F8 94 aa7.56□□□□□ -1.2
CLPX-201ENST00000300107 NF1P21359 2839 aa7.56□□□□□ -1.2
CLPX-201ENST00000300107 DMDP11532 3685 aa7.55□□□□□ -1.2
CLPX-201ENST00000300107 PANO1I0J062 215 aa7.54□□□□□ -1.2
CLPX-201ENST00000300107 SPATA8Q6RVD6 105 aa7.54□□□□□ -1.2
CLPX-201ENST00000300107 ROMO1P60602 79 aa7.54□□□□□ -1.2
CLPX-201ENST00000300107 TNRC18O15417 2968 aaPredicted RBP7.53□□□□□ -1.2
CLPX-201ENST00000300107 H1FX-AS1Q4G0G2 97 aa7.53□□□□□ -1.2
CLPX-201ENST00000300107 KRTAP10-2P60368 255 aa7.53□□□□□ -1.2
CLPX-201ENST00000300107 A6NN06 94 aa7.52□□□□□ -1.21
CLPX-201ENST00000300107 A0A087X002 238 aa7.51□□□□□ -1.21
CLPX-201ENST00000300107 NOTCH2NLQ7Z3S9 236 aa7.51□□□□□ -1.21
CLPX-201ENST00000300107 KRTAP10-1P60331 282 aa7.51□□□□□ -1.21
CLPX-201ENST00000300107 LOC400499M0QZD8 3231 aa7.5□□□□□ -1.21
CLPX-201ENST00000300107 FBN2P35556 2912 aa7.47□□□□□ -1.21
CLPX-201ENST00000300107 R4GN34 69 aa7.47□□□□□ -1.21
CLPX-201ENST00000300107 A0A0A0MQY5 61 aa7.47□□□□□ -1.21
CLPX-201ENST00000300107 KRTAP7-1Q8IUC3 87 aa7.44□□□□□ -1.22
CLPX-201ENST00000300107 KRTAP11-1Q8IUC1 163 aa7.44□□□□□ -1.22
CLPX-201ENST00000300107 A8MU10 97 aa7.43□□□□□ -1.22
CLPX-201ENST00000300107 M0R2T5 61 aa7.42□□□□□ -1.22
CLPX-201ENST00000300107 Q5VSD8 79 aa7.42□□□□□ -1.22
CLPX-201ENST00000300107 ASPMQ8IZT6 3477 aa7.42□□□□□ -1.22
CLPX-201ENST00000300107 TENM1Q9UKZ4 2725 aa7.38□□□□□ -1.23
CLPX-201ENST00000300107 PKD1L1Q8TDX9 2849 aa7.36□□□□□ -1.23
CLPX-201ENST00000300107 ADM2Q7Z4H4 148 aa7.36□□□□□ -1.23
CLPX-201ENST00000300107 KRTAP25-1Q3LHN0 102 aa7.34□□□□□ -1.23
CLPX-201ENST00000300107 M0QZ58 72 aa7.33□□□□□ -1.24
CLPX-201ENST00000300107 DCHS1Q96JQ0 3298 aa7.32□□□□□ -1.24
CLPX-201ENST00000300107 KRTAP13-1Q8IUC0 172 aa7.31□□□□□ -1.24
CLPX-201ENST00000300107 LAMA5O15230 3695 aa7.3□□□□□ -1.24
CLPX-201ENST00000300107 ZFHX4Q86UP3 3567 aa7.29□□□□□ -1.24
CLPX-201ENST00000300107 Q6ZRN7 208 aaPredicted RBP7.29□□□□□ -1.24
CLPX-201ENST00000300107 SEC61BP60468 96 aaKnown RBP7.28□□□□□ -1.24
CLPX-201ENST00000300107 HRNRQ86YZ3 2850 aaPredicted RBP7.28□□□□□ -1.24
CLPX-201ENST00000300107 TENM2Q9NT68 2774 aa7.24□□□□□ -1.25
CLPX-201ENST00000300107 RPS29P62273 56 aaKnown RBP7.22□□□□□ -1.25
CLPX-201ENST00000300107 KRTAP16-1A8MUX0 517 aa7.22□□□□□ -1.25
CLPX-201ENST00000300107 MXRA5Q9NR99 2828 aa7.21□□□□□ -1.25
CLPX-201ENST00000300107 KRTAP13-2Q52LG2 175 aa7.21□□□□□ -1.26
CLPX-201ENST00000300107 VWFP04275 2813 aa7.17□□□□□ -1.26
CLPX-201ENST00000300107 CELSR1Q9NYQ6 3014 aa7.14□□□□□ -1.27
CLPX-201ENST00000300107 NDUFAF8A1L188 74 aa7.13□□□□□ -1.27
CLPX-201ENST00000300107 SRRM2Q9UQ35 2752 aaKnown RBP7.12□□□□□ -1.27
CLPX-201ENST00000300107 SMG1Q96Q15 3661 aaKnown RBP7.12□□□□□ -1.27
CLPX-201ENST00000300107 RELNP78509 3460 aa7.12□□□□□ -1.27
CLPX-201ENST00000300107 A8MUU9 505 aa7.07□□□□□ -1.28
CLPX-201ENST00000300107 FBN1P35555 2871 aaKnown RBP7.05□□□□□ -1.28
CLPX-201ENST00000300107 TGP01266 2768 aa7.02□□□□□ -1.29
CLPX-201ENST00000300107 PLAC4Q8WY50 150 aa7.01□□□□□ -1.29
CLPX-201ENST00000300107 PDZD2O15018 2839 aa7.01□□□□□ -1.29
CLPX-201ENST00000300107 SPENQ96T58 3664 aaKnown RBP7.01□□□□□ -1.29
CLPX-201ENST00000300107 C20orf166-AS1Q96NR2 134 aa6.99□□□□□ -1.29
CLPX-201ENST00000300107 CSMD1Q96PZ7 3565 aa6.96□□□□□ -1.3
CLPX-201ENST00000300107 KRTAP21-3Q3LHN1 58 aa6.95□□□□□ -1.3
CLPX-201ENST00000300107 SVEP1Q4LDE5 3571 aa6.91□□□□□ -1.3
CLPX-201ENST00000300107 H0YAA0 97 aa6.9□□□□□ -1.3
CLPX-201ENST00000300107 KRTAP1-4P0C5Y4 121 aa6.86□□□□□ -1.31
CLPX-201ENST00000300107 C10orf95Q9H7T3 257 aa6.86□□□□□ -1.31
CLPX-201ENST00000300107 OTOGQ6ZRI0 2925 aa6.83□□□□□ -1.32
CLPX-201ENST00000300107 TNP1P09430 55 aa6.83□□□□□ -1.32
CLPX-201ENST00000300107 ZFHX3Q15911 3703 aa6.82□□□□□ -1.32
CLPX-201ENST00000300107 BSNQ9UPA5 3926 aa6.8□□□□□ -1.32
CLPX-201ENST00000300107 PP632Q6XCG6 107 aa6.76□□□□□ -1.33
CLPX-201ENST00000300107 P0C880 135 aa6.75□□□□□ -1.33
CLPX-201ENST00000300107 KRTAP13-3Q3SY46 172 aa6.71□□□□□ -1.33
CLPX-201ENST00000300107 XP32Q5T750 250 aa6.71□□□□□ -1.33
CLPX-201ENST00000300107 CUBNO60494 3623 aa6.66□□□□□ -1.34
CLPX-201ENST00000300107 NBPF19A0A087WUL8 3843 aa6.64□□□□□ -1.35
CLPX-201ENST00000300107 KRTAP10-8P60410 259 aa6.61□□□□□ -1.35
CLPX-201ENST00000300107 FBN3Q75N90 2809 aa6.59□□□□□ -1.36
CLPX-201ENST00000300107 CSMD2Q7Z408 3487 aa6.59□□□□□ -1.36
CLPX-201ENST00000300107 COL7A1Q02388 2944 aa6.57□□□□□ -1.36
CLPX-201ENST00000300107 VPS13CQ709C8 3753 aa6.55□□□□□ -1.36
CLPX-201ENST00000300107 A0A1B0GVY2 172 aa6.55□□□□□ -1.36
CLPX-201ENST00000300107 TPRXLQ17RH7 258 aa6.51□□□□□ -1.37
CLPX-201ENST00000300107 MEGF8Q7Z7M0 2845 aa6.41□□□□□ -1.38
CLPX-201ENST00000300107 KRTAP12-2P59991 146 aa6.4□□□□□ -1.38
CLPX-201ENST00000300107 KRTAP10-10P60014 251 aa6.35□□□□□ -1.39
CLPX-201ENST00000300107 KRTAP3-1Q9BYR8 98 aa6.34□□□□□ -1.39
CLPX-201ENST00000300107 KRTAP12-1P59990 96 aa6.33□□□□□ -1.4
CLPX-201ENST00000300107 TRRAPQ9Y4A5 3859 aa6.29□□□□□ -1.4
CLPX-201ENST00000300107 KRTAP13-4Q3LI77 160 aa6.26□□□□□ -1.41
CLPX-201ENST00000300107 ZNF469Q96JG9 3925 aaPredicted RBP6.23□□□□□ -1.41
CLPX-201ENST00000300107 KRTAP10-6P60371 365 aaPredicted RBP6.2□□□□□ -1.42
CLPX-201ENST00000300107 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
CLPX-201ENST00000300107 ANK3Q12955 4377 aaKnown RBP6.09□□□□□ -1.43
CLPX-201ENST00000300107 AKAP9Q99996 3911 aa6.02□□□□□ -1.45
CLPX-201ENST00000300107 KRTAP15-1Q3LI76 137 aa6□□□□□ -1.45
CLPX-201ENST00000300107 KRTAP3-2Q9BYR7 98 aa5.98□□□□□ -1.45
CLPX-201ENST00000300107 KRTAP3-3Q9BYR6 98 aa5.93□□□□□ -1.46
CLPX-201ENST00000300107 MT1HL1P0DM35 61 aa5.9□□□□□ -1.47
CLPX-201ENST00000300107 KRTAP4-5Q9BYR2 181 aa5.85□□□□□ -1.47
CLPX-201ENST00000300107 CSMD3Q7Z407 3707 aa5.77□□□□□ -1.49
CLPX-201ENST00000300107 INE1O15225 51 aa5.77□□□□□ -1.49
CLPX-201ENST00000300107 KRTAP10-4P60372 401 aaPredicted RBP5.74□□□□□ -1.49
CLPX-201ENST00000300107 DNHD1Q96M86 4753 aa5.68□□□□□ -1.5
CLPX-201ENST00000300107 HUWE1Q7Z6Z7 4374 aaKnown RBP5.68□□□□□ -1.5
CLPX-201ENST00000300107 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
CLPX-201ENST00000300107 KRTAP10-12P60413 245 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms