RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 UQCR11O14957 56 aa8.98□□□□□ -0.97
CDH23-202ENST00000299366 KRTAP4-16G5E9R7 235 aaPredicted RBP8.98□□□□□ -0.97
CDH23-202ENST00000299366 Q5VV11 94 aa8.97□□□□□ -0.97
CDH23-202ENST00000299366 KRTAP7-1Q8IUC3 87 aa8.97□□□□□ -0.97
CDH23-202ENST00000299366 RBM12B-AS1Q9P1G2 102 aa8.97□□□□□ -0.97
CDH23-202ENST00000299366 MIR22HGQ0VDD5 57 aa8.96□□□□□ -0.97
CDH23-202ENST00000299366 HRES1P13985 223 aa8.96□□□□□ -0.98
CDH23-202ENST00000299366 SPANXA2-OT1Q8N9U9 137 aa8.95□□□□□ -0.98
CDH23-202ENST00000299366 PRAC1Q96KF2 57 aa8.95□□□□□ -0.98
CDH23-202ENST00000299366 ZCCHC13Q8WW36 166 aaKnown RBP8.94□□□□□ -0.98
CDH23-202ENST00000299366 A0A087X002 238 aa8.92□□□□□ -0.98
CDH23-202ENST00000299366 NOTCH2NLQ7Z3S9 236 aa8.92□□□□□ -0.98
CDH23-202ENST00000299366 AKAP9Q99996 3911 aa8.91□□□□□ -0.98
CDH23-202ENST00000299366 IGLV7-46A0A075B6I9 117 aa8.91□□□□□ -0.98
CDH23-202ENST00000299366 A0A0D9SG42 100 aa8.9□□□□□ -0.98
CDH23-202ENST00000299366 KRTAP10-2P60368 255 aa8.89□□□□□ -0.99
CDH23-202ENST00000299366 LCA10Q71F78 164 aa8.87□□□□□ -0.99
CDH23-202ENST00000299366 SPINK7P58062 85 aa8.86□□□□□ -0.99
CDH23-202ENST00000299366 CDC42SE1Q9NRR8 79 aa8.86□□□□□ -0.99
CDH23-202ENST00000299366 SPRR1BP22528 89 aa8.83□□□□□ -1
CDH23-202ENST00000299366 PLAC8Q9NZF1 115 aa8.83□□□□□ -1
CDH23-202ENST00000299366 LCE6AA0A183 80 aa8.8□□□□□ -1
CDH23-202ENST00000299366 KRTAP29-1A8MX34 341 aaPredicted RBP8.8□□□□□ -1
CDH23-202ENST00000299366 FBN3Q75N90 2809 aa8.79□□□□□ -1
CDH23-202ENST00000299366 LINC01554Q52M75 96 aa8.79□□□□□ -1
CDH23-202ENST00000299366 KRTAP10-1P60331 282 aa8.79□□□□□ -1
CDH23-202ENST00000299366 Q5W150 140 aa8.79□□□□□ -1
CDH23-202ENST00000299366 CSMD3Q7Z407 3707 aa8.79□□□□□ -1
CDH23-202ENST00000299366 CRIPTQ9P021 101 aa8.76□□□□□ -1.01
CDH23-202ENST00000299366 Q75L30 129 aa8.76□□□□□ -1.01
CDH23-202ENST00000299366 SPINT4Q6UDR6 99 aa8.74□□□□□ -1.01
CDH23-202ENST00000299366 COL7A1Q02388 2944 aa8.72□□□□□ -1.01
CDH23-202ENST00000299366 H3BS24 57 aa8.7□□□□□ -1.02
CDH23-202ENST00000299366 LINC01558Q9Y6Z2 57 aa8.7□□□□□ -1.02
CDH23-202ENST00000299366 Q6ZRN7 208 aaPredicted RBP8.63□□□□□ -1.03
CDH23-202ENST00000299366 ANK3Q12955 4377 aaKnown RBP8.63□□□□□ -1.03
CDH23-202ENST00000299366 A0A1B0GU33 70 aa8.61□□□□□ -1.03
CDH23-202ENST00000299366 CSAG1Q6PB30 78 aa8.6□□□□□ -1.03
CDH23-202ENST00000299366 J3QL48 77 aa8.59□□□□□ -1.03
CDH23-202ENST00000299366 Q6ZR54 194 aa8.59□□□□□ -1.03
CDH23-202ENST00000299366 COX6B2Q6YFQ2 88 aa8.58□□□□□ -1.04
CDH23-202ENST00000299366 LINC00483Q53H64 154 aa8.56□□□□□ -1.04
CDH23-202ENST00000299366 ADM2Q7Z4H4 148 aa8.55□□□□□ -1.04
CDH23-202ENST00000299366 A6NN06 94 aa8.54□□□□□ -1.04
CDH23-202ENST00000299366 MEGF8Q7Z7M0 2845 aa8.51□□□□□ -1.05
CDH23-202ENST00000299366 KRTAP13-2Q52LG2 175 aa8.48□□□□□ -1.05
CDH23-202ENST00000299366 KRTAP13-1Q8IUC0 172 aa8.48□□□□□ -1.05
CDH23-202ENST00000299366 SPATA8Q6RVD6 105 aa8.48□□□□□ -1.05
CDH23-202ENST00000299366 DMAC1Q96GE9 116 aa8.48□□□□□ -1.05
CDH23-202ENST00000299366 Q6ZSA8 131 aa8.43□□□□□ -1.06
CDH23-202ENST00000299366 Q5VSD8 79 aa8.36□□□□□ -1.07
CDH23-202ENST00000299366 S4R3F8 94 aa8.28□□□□□ -1.08
CDH23-202ENST00000299366 ASB16-AS1Q495Z4 193 aa8.23□□□□□ -1.09
CDH23-202ENST00000299366 CAMK2N1Q7Z7J9 78 aa8.22□□□□□ -1.09
CDH23-202ENST00000299366 H1FX-AS1Q4G0G2 97 aa8.22□□□□□ -1.09
CDH23-202ENST00000299366 RPL37P61927 97 aaKnown RBP8.18□□□□□ -1.1
CDH23-202ENST00000299366 R4GN34 69 aa8.18□□□□□ -1.1
CDH23-202ENST00000299366 DNAH10Q8IVF4 4471 aa8.14□□□□□ -1.11
CDH23-202ENST00000299366 KRTAP1-4P0C5Y4 121 aa8.11□□□□□ -1.11
CDH23-202ENST00000299366 M0R2T5 61 aa8.1□□□□□ -1.11
CDH23-202ENST00000299366 M0QZ58 72 aa8.1□□□□□ -1.11
CDH23-202ENST00000299366 ROMO1P60602 79 aa8.05□□□□□ -1.12
CDH23-202ENST00000299366 KRTAP13-3Q3SY46 172 aa8.03□□□□□ -1.12
CDH23-202ENST00000299366 ANK2Q01484 3957 aa8□□□□□ -1.13
CDH23-202ENST00000299366 HUWE1Q7Z6Z7 4374 aaKnown RBP7.97□□□□□ -1.13
CDH23-202ENST00000299366 KRTAP25-1Q3LHN0 102 aa7.96□□□□□ -1.13
CDH23-202ENST00000299366 LUZP6Q538Z0 58 aa7.93□□□□□ -1.14
CDH23-202ENST00000299366 NDUFAF8A1L188 74 aa7.92□□□□□ -1.14
CDH23-202ENST00000299366 KRTAP16-1A8MUX0 517 aa7.91□□□□□ -1.14
CDH23-202ENST00000299366 SEC61BP60468 96 aaKnown RBP7.9□□□□□ -1.14
CDH23-202ENST00000299366 A8MUU9 505 aa7.9□□□□□ -1.15
CDH23-202ENST00000299366 C10orf95Q9H7T3 257 aa7.89□□□□□ -1.15
CDH23-202ENST00000299366 LYSTQ99698 3801 aa7.89□□□□□ -1.15
CDH23-202ENST00000299366 H0YAA0 97 aa7.88□□□□□ -1.15
CDH23-202ENST00000299366 C20orf166-AS1Q96NR2 134 aa7.86□□□□□ -1.15
CDH23-202ENST00000299366 RPS29P62273 56 aaKnown RBP7.84□□□□□ -1.15
CDH23-202ENST00000299366 DNHD1Q96M86 4753 aa7.79□□□□□ -1.16
CDH23-202ENST00000299366 DNAH9Q9NYC9 4486 aa7.77□□□□□ -1.16
CDH23-202ENST00000299366 PLECQ15149 4684 aaKnown RBP7.77□□□□□ -1.17
CDH23-202ENST00000299366 XP32Q5T750 250 aa7.77□□□□□ -1.17
CDH23-202ENST00000299366 P0C880 135 aa7.74□□□□□ -1.17
CDH23-202ENST00000299366 FRAS1Q86XX4 4008 aa7.64□□□□□ -1.19
CDH23-202ENST00000299366 A0A1B0GVY2 172 aa7.64□□□□□ -1.19
CDH23-202ENST00000299366 A0A0A0MQY5 61 aa7.63□□□□□ -1.19
CDH23-202ENST00000299366 DNAH1Q9P2D7 4330 aa7.63□□□□□ -1.19
CDH23-202ENST00000299366 DNAH8Q96JB1 4490 aa7.61□□□□□ -1.19
CDH23-202ENST00000299366 DNAH11Q96DT5 4516 aa7.6□□□□□ -1.19
CDH23-202ENST00000299366 KRTAP3-1Q9BYR8 98 aa7.58□□□□□ -1.2
CDH23-202ENST00000299366 DNAH7Q8WXX0 4024 aa7.57□□□□□ -1.2
CDH23-202ENST00000299366 PRKDCP78527 4128 aaKnown RBP7.55□□□□□ -1.2
CDH23-202ENST00000299366 STARD9Q9P2P6 4700 aa7.55□□□□□ -1.2
CDH23-202ENST00000299366 KMT2AQ03164 3969 aa7.51□□□□□ -1.21
CDH23-202ENST00000299366 CMYA5Q8N3K9 4069 aa7.5□□□□□ -1.21
CDH23-202ENST00000299366 KRTAP10-8P60410 259 aa7.5□□□□□ -1.21
CDH23-202ENST00000299366 PLAC4Q8WY50 150 aa7.49□□□□□ -1.21
CDH23-202ENST00000299366 DNAH17Q9UFH2 4485 aa7.47□□□□□ -1.21
CDH23-202ENST00000299366 FAT1Q14517 4588 aa7.43□□□□□ -1.22
CDH23-202ENST00000299366 LRP1BQ9NZR2 4599 aa7.43□□□□□ -1.22
CDH23-202ENST00000299366 KRTAP21-3Q3LHN1 58 aa7.41□□□□□ -1.22
CDH23-202ENST00000299366 KRTAP12-2P59991 146 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms