RNA–Protein interactions for RNA: ENST00000299213.9

LARP6-201, Transcript of La ribonucleoprotein domain family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LARP6, Length 4,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP6-201ENST00000299213 RBM12B-AS1Q9P1G2 102 aa9.36□□□□□ -0.91
LARP6-201ENST00000299213 LINC01554Q52M75 96 aa9.34□□□□□ -0.91
LARP6-201ENST00000299213 SPINT4Q6UDR6 99 aa9.33□□□□□ -0.92
LARP6-201ENST00000299213 Q5VV11 94 aa9.33□□□□□ -0.92
LARP6-201ENST00000299213 Q6ZRN7 208 aaPredicted RBP9.33□□□□□ -0.92
LARP6-201ENST00000299213 A0A087X002 238 aa9.32□□□□□ -0.92
LARP6-201ENST00000299213 TENM1Q9UKZ4 2725 aa9.31□□□□□ -0.92
LARP6-201ENST00000299213 NOTCH2NLQ7Z3S9 236 aa9.3□□□□□ -0.92
LARP6-201ENST00000299213 LCA10Q71F78 164 aa9.29□□□□□ -0.92
LARP6-201ENST00000299213 A0A1B0GU33 70 aa9.29□□□□□ -0.92
LARP6-201ENST00000299213 CRIPTQ9P021 101 aa9.29□□□□□ -0.92
LARP6-201ENST00000299213 SPINK7P58062 85 aa9.28□□□□□ -0.92
LARP6-201ENST00000299213 Q6ZSA8 131 aa9.28□□□□□ -0.92
LARP6-201ENST00000299213 PKD1L1Q8TDX9 2849 aa9.26□□□□□ -0.93
LARP6-201ENST00000299213 LCE6AA0A183 80 aa9.23□□□□□ -0.93
LARP6-201ENST00000299213 SMG1Q96Q15 3661 aaKnown RBP9.23□□□□□ -0.93
LARP6-201ENST00000299213 PDZD2O15018 2839 aa9.2□□□□□ -0.94
LARP6-201ENST00000299213 FBN1P35555 2871 aaKnown RBP9.2□□□□□ -0.94
LARP6-201ENST00000299213 DMAC1Q96GE9 116 aa9.17□□□□□ -0.94
LARP6-201ENST00000299213 SPENQ96T58 3664 aaKnown RBP9.16□□□□□ -0.94
LARP6-201ENST00000299213 CSMD1Q96PZ7 3565 aa9.16□□□□□ -0.94
LARP6-201ENST00000299213 Q5VSD8 79 aa9.15□□□□□ -0.94
LARP6-201ENST00000299213 KRTAP13-1Q8IUC0 172 aa9.15□□□□□ -0.94
LARP6-201ENST00000299213 VWFP04275 2813 aa9.15□□□□□ -0.95
LARP6-201ENST00000299213 PRAC1Q96KF2 57 aa9.13□□□□□ -0.95
LARP6-201ENST00000299213 OTOGQ6ZRI0 2925 aa9.07□□□□□ -0.96
LARP6-201ENST00000299213 CSAG1Q6PB30 78 aa9.07□□□□□ -0.96
LARP6-201ENST00000299213 TGP01266 2768 aa9.06□□□□□ -0.96
LARP6-201ENST00000299213 KRTAP13-2Q52LG2 175 aa9.06□□□□□ -0.96
LARP6-201ENST00000299213 TENM2Q9NT68 2774 aa9.06□□□□□ -0.96
LARP6-201ENST00000299213 S4R3F8 94 aa9.05□□□□□ -0.96
LARP6-201ENST00000299213 CUBNO60494 3623 aa9.04□□□□□ -0.96
LARP6-201ENST00000299213 ASB16-AS1Q495Z4 193 aa9.02□□□□□ -0.97
LARP6-201ENST00000299213 SVEP1Q4LDE5 3571 aa8.99□□□□□ -0.97
LARP6-201ENST00000299213 CAMK2N1Q7Z7J9 78 aa8.96□□□□□ -0.98
LARP6-201ENST00000299213 R4GN34 69 aa8.89□□□□□ -0.99
LARP6-201ENST00000299213 ZFHX3Q15911 3703 aa8.89□□□□□ -0.99
LARP6-201ENST00000299213 SPATA8Q6RVD6 105 aa8.89□□□□□ -0.99
LARP6-201ENST00000299213 SEC61BP60468 96 aaKnown RBP8.88□□□□□ -0.99
LARP6-201ENST00000299213 H1FX-AS1Q4G0G2 97 aa8.88□□□□□ -0.99
LARP6-201ENST00000299213 M0R2T5 61 aa8.88□□□□□ -0.99
LARP6-201ENST00000299213 RPL37P61927 97 aaKnown RBP8.87□□□□□ -0.99
LARP6-201ENST00000299213 A8MU10 97 aa8.86□□□□□ -0.99
LARP6-201ENST00000299213 NBPF19A0A087WUL8 3843 aa8.85□□□□□ -0.99
LARP6-201ENST00000299213 RPS29P62273 56 aaKnown RBP8.84□□□□□ -0.99
LARP6-201ENST00000299213 SRRM2Q9UQ35 2752 aaKnown RBP8.82□□□□□ -1
LARP6-201ENST00000299213 CSMD2Q7Z408 3487 aa8.81□□□□□ -1
LARP6-201ENST00000299213 BSNQ9UPA5 3926 aa8.8□□□□□ -1
LARP6-201ENST00000299213 M0QZ58 72 aa8.75□□□□□ -1.01
LARP6-201ENST00000299213 ADM2Q7Z4H4 148 aa8.74□□□□□ -1.01
LARP6-201ENST00000299213 ROMO1P60602 79 aa8.72□□□□□ -1.01
LARP6-201ENST00000299213 KRTAP1-4P0C5Y4 121 aa8.71□□□□□ -1.01
LARP6-201ENST00000299213 LUZP6Q538Z0 58 aa8.68□□□□□ -1.02
LARP6-201ENST00000299213 A6NN06 94 aa8.68□□□□□ -1.02
LARP6-201ENST00000299213 KRTAP21-3Q3LHN1 58 aa8.65□□□□□ -1.03
LARP6-201ENST00000299213 A8MUU9 505 aa8.62□□□□□ -1.03
LARP6-201ENST00000299213 FBN3Q75N90 2809 aa8.61□□□□□ -1.03
LARP6-201ENST00000299213 C20orf166-AS1Q96NR2 134 aa8.59□□□□□ -1.03
LARP6-201ENST00000299213 VPS13CQ709C8 3753 aa8.57□□□□□ -1.04
LARP6-201ENST00000299213 TRRAPQ9Y4A5 3859 aa8.48□□□□□ -1.05
LARP6-201ENST00000299213 KRTAP16-1A8MUX0 517 aa8.46□□□□□ -1.06
LARP6-201ENST00000299213 H3BS24 57 aa8.46□□□□□ -1.06
LARP6-201ENST00000299213 COL7A1Q02388 2944 aa8.43□□□□□ -1.06
LARP6-201ENST00000299213 KRTAP25-1Q3LHN0 102 aa8.42□□□□□ -1.06
LARP6-201ENST00000299213 XP32Q5T750 250 aa8.4□□□□□ -1.06
LARP6-201ENST00000299213 MEGF8Q7Z7M0 2845 aa8.37□□□□□ -1.07
LARP6-201ENST00000299213 PLAC4Q8WY50 150 aa8.33□□□□□ -1.08
LARP6-201ENST00000299213 ANK3Q12955 4377 aaKnown RBP8.3□□□□□ -1.08
LARP6-201ENST00000299213 KRTAP13-3Q3SY46 172 aa8.29□□□□□ -1.08
LARP6-201ENST00000299213 H0YAA0 97 aa8.27□□□□□ -1.09
LARP6-201ENST00000299213 A0A0A0MQY5 61 aa8.16□□□□□ -1.1
LARP6-201ENST00000299213 A0A1B0GVY2 172 aa8.16□□□□□ -1.1
LARP6-201ENST00000299213 TPRXLQ17RH7 258 aa8.15□□□□□ -1.1
LARP6-201ENST00000299213 C10orf95Q9H7T3 257 aa8.13□□□□□ -1.11
LARP6-201ENST00000299213 P0C880 135 aa8.13□□□□□ -1.11
LARP6-201ENST00000299213 KRTAP10-8P60410 259 aa8.13□□□□□ -1.11
LARP6-201ENST00000299213 ZNF469Q96JG9 3925 aaPredicted RBP8.12□□□□□ -1.11
LARP6-201ENST00000299213 NDUFAF8A1L188 74 aa8.06□□□□□ -1.12
LARP6-201ENST00000299213 TNP1P09430 55 aa8.03□□□□□ -1.12
LARP6-201ENST00000299213 KRTAP3-1Q9BYR8 98 aa7.91□□□□□ -1.14
LARP6-201ENST00000299213 CSMD3Q7Z407 3707 aa7.81□□□□□ -1.16
LARP6-201ENST00000299213 AKAP9Q99996 3911 aa7.8□□□□□ -1.16
LARP6-201ENST00000299213 PP632Q6XCG6 107 aa7.79□□□□□ -1.16
LARP6-201ENST00000299213 KRTAP10-10P60014 251 aa7.78□□□□□ -1.16
LARP6-201ENST00000299213 KRTAP12-2P59991 146 aa7.75□□□□□ -1.17
LARP6-201ENST00000299213 HUWE1Q7Z6Z7 4374 aaKnown RBP7.71□□□□□ -1.18
LARP6-201ENST00000299213 KRTAP12-1P59990 96 aa7.65□□□□□ -1.19
LARP6-201ENST00000299213 KRTAP10-6P60371 365 aaPredicted RBP7.62□□□□□ -1.19
LARP6-201ENST00000299213 KRTAP13-4Q3LI77 160 aa7.62□□□□□ -1.19
LARP6-201ENST00000299213 MT1HL1P0DM35 61 aa7.59□□□□□ -1.19
LARP6-201ENST00000299213 KRTAP10-4P60372 401 aaPredicted RBP7.55□□□□□ -1.2
LARP6-201ENST00000299213 KRTAP3-3Q9BYR6 98 aa7.43□□□□□ -1.22
LARP6-201ENST00000299213 PRO2289Q9P1D8 64 aa7.42□□□□□ -1.22
LARP6-201ENST00000299213 DNAH9Q9NYC9 4486 aa7.41□□□□□ -1.22
LARP6-201ENST00000299213 KRTAP3-2Q9BYR7 98 aa7.4□□□□□ -1.22
LARP6-201ENST00000299213 KRTAP4-5Q9BYR2 181 aa7.4□□□□□ -1.23
LARP6-201ENST00000299213 DNHD1Q96M86 4753 aa7.4□□□□□ -1.23
LARP6-201ENST00000299213 DNAH5Q8TE73 4624 aa7.33□□□□□ -1.24
LARP6-201ENST00000299213 PLECQ15149 4684 aaKnown RBP7.32□□□□□ -1.24
LARP6-201ENST00000299213 DNAH11Q96DT5 4516 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms