RNA–Protein interactions for RNA: ENST00000299213.9

LARP6-201, Transcript of La ribonucleoprotein domain family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LARP6, Length 4,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP6-201ENST00000299213 DCAF8L2P0C7V8 631 aa27.85■■■□□ 2.05
LARP6-201ENST00000299213 NISCHQ9Y2I1 1504 aa27.83■■■□□ 2.05
LARP6-201ENST00000299213 SUPT5HO00267 1087 aaKnown RBP26.81■■□□□ 1.88
LARP6-201ENST00000299213 SHROOM4Q9ULL8 1493 aa26.55■■□□□ 1.84
LARP6-201ENST00000299213 EHMT2Q96KQ7 1210 aa25.69■■□□□ 1.7
LARP6-201ENST00000299213 FAM9AQ8IZU1 332 aaPredicted RBP25.21■■□□□ 1.63
LARP6-201ENST00000299213 PCGF6Q9BYE7 350 aa25.04■■□□□ 1.6
LARP6-201ENST00000299213 TTBK1Q5TCY1 1321 aaPredicted RBP24.8■■□□□ 1.56
LARP6-201ENST00000299213 TRIM41Q8WV44 630 aa24.76■■□□□ 1.55
LARP6-201ENST00000299213 APLP2Q06481 763 aa24.73■■□□□ 1.55
LARP6-201ENST00000299213 RANGAP1P46060 587 aaPredicted RBP24.49■■□□□ 1.51
LARP6-201ENST00000299213 UBTFP17480 764 aaKnown RBP24.28■■□□□ 1.48
LARP6-201ENST00000299213 CCER1Q8TC90 406 aaPredicted RBP24.26■■□□□ 1.47
LARP6-201ENST00000299213 CHIC1Q5VXU3 224 aa24.26■■□□□ 1.47
LARP6-201ENST00000299213 PPARGC1BQ86YN6 1023 aaKnown RBP24.21■■□□□ 1.47
LARP6-201ENST00000299213 ZEB1P37275 1124 aaPredicted RBP24.19■■□□□ 1.46
LARP6-201ENST00000299213 LOC105371045A0A1W2PR82 267 aa24.18■■□□□ 1.46
LARP6-201ENST00000299213 ATP1B4Q9UN42 357 aaPredicted RBP24.02■■□□□ 1.44
LARP6-201ENST00000299213 PELP1Q8IZL8 1130 aaKnown RBP24.02■■□□□ 1.44
LARP6-201ENST00000299213 TRIM26Q12899 539 aaPredicted RBP23.98■■□□□ 1.43
LARP6-201ENST00000299213 HRCP23327 699 aa23.9■■□□□ 1.42
LARP6-201ENST00000299213 CENPBP07199 599 aaPredicted RBP23.86■■□□□ 1.41
LARP6-201ENST00000299213 YTHDC1Q96MU7 727 aaKnown RBP23.63■■□□□ 1.37
LARP6-201ENST00000299213 ABCC9O60706 1549 aa23.61■■□□□ 1.37
LARP6-201ENST00000299213 ITGAEP38570 1179 aa23.5■■□□□ 1.35
LARP6-201ENST00000299213 HNRNPUL2Q1KMD3 747 aaKnown RBP23.5■■□□□ 1.35
LARP6-201ENST00000299213 PABPN1Q86U42 306 aaKnown RBP eCLIP23.46■■□□□ 1.35
LARP6-201ENST00000299213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.39■■□□□ 1.33
LARP6-201ENST00000299213 NEFLP07196 543 aa23.17■■□□□ 1.3
LARP6-201ENST00000299213 ZCCHC6Q5VYS8 1495 aaKnown RBP23.11■■□□□ 1.29
LARP6-201ENST00000299213 ERICH6Q7L0X2 663 aa23.06■■□□□ 1.28
LARP6-201ENST00000299213 DIEXFQ68CQ4 756 aaKnown RBP23.02■■□□□ 1.28
LARP6-201ENST00000299213 POLR3GLQ9BT43 218 aa22.93■■□□□ 1.26
LARP6-201ENST00000299213 FAM50AQ14320 339 aaKnown RBP22.89■■□□□ 1.25
LARP6-201ENST00000299213 CSRNP3Q8WYN3 585 aa22.87■■□□□ 1.25
LARP6-201ENST00000299213 CNGB1Q14028 1251 aaPredicted RBP22.86■■□□□ 1.25
LARP6-201ENST00000299213 SCRIBQ14160 1630 aa22.83■■□□□ 1.25
LARP6-201ENST00000299213 MYT1LQ9UL68 1186 aa22.76■■□□□ 1.23
LARP6-201ENST00000299213 NEUROD1Q13562 356 aa22.71■■□□□ 1.23
LARP6-201ENST00000299213 CCDC180Q9P1Z9 1646 aa22.63■■□□□ 1.21
LARP6-201ENST00000299213 P3H3Q8IVL6 736 aa22.62■■□□□ 1.21
LARP6-201ENST00000299213 TRIM52Q96A61 297 aa22.61■■□□□ 1.21
LARP6-201ENST00000299213 ZNF316A6NFI3 1004 aaPredicted RBP22.56■■□□□ 1.2
LARP6-201ENST00000299213 DCAF1Q9Y4B6 1507 aa22.55■■□□□ 1.2
LARP6-201ENST00000299213 GTF3C3Q9Y5Q9 886 aa22.53■■□□□ 1.2
LARP6-201ENST00000299213 MYO15BQ96JP2 1530 aa22.51■■□□□ 1.19
LARP6-201ENST00000299213 ARID3CA6NKF2 412 aa22.43■■□□□ 1.18
LARP6-201ENST00000299213 FBLN2P98095 1184 aa22.43■■□□□ 1.18
LARP6-201ENST00000299213 RSF1Q96T23 1441 aaPredicted RBP22.4■■□□□ 1.18
LARP6-201ENST00000299213 MYT1Q01538 1121 aa22.38■■□□□ 1.17
LARP6-201ENST00000299213 ZNF326Q5BKZ1 582 aaKnown RBP22.36■■□□□ 1.17
LARP6-201ENST00000299213 BCANQ96GW7 911 aa22.34■■□□□ 1.17
LARP6-201ENST00000299213 ANP32CO43423 234 aa22.3■■□□□ 1.16
LARP6-201ENST00000299213 ACIN1Q9UKV3 1341 aaKnown RBP22.29■■□□□ 1.16
LARP6-201ENST00000299213 SLC4A1APQ9BWU0 796 aaKnown RBP22.27■■□□□ 1.16
LARP6-201ENST00000299213 DAXXQ9UER7 740 aaPredicted RBP22.19■■□□□ 1.14
LARP6-201ENST00000299213 ZNF777Q9ULD5 760 aaPredicted RBP22.13■■□□□ 1.13
LARP6-201ENST00000299213 CLIP1P30622 1438 aa22.07■■□□□ 1.12
LARP6-201ENST00000299213 RB1CC1Q8TDY2 1594 aa22.05■■□□□ 1.12
LARP6-201ENST00000299213 DDX10Q13206 875 aaKnown RBP22■■□□□ 1.11
LARP6-201ENST00000299213 CECR2Q9BXF3 1484 aa22■■□□□ 1.11
LARP6-201ENST00000299213 CEP162Q5TB80 1403 aa22■■□□□ 1.11
LARP6-201ENST00000299213 CDK11AQ9UQ88 783 aaPredicted RBP21.99■■□□□ 1.11
LARP6-201ENST00000299213 TONSLQ96HA7 1378 aa21.97■■□□□ 1.11
LARP6-201ENST00000299213 CHIC2Q9UKJ5 165 aa21.97■■□□□ 1.11
LARP6-201ENST00000299213 CLSPNQ9HAW4 1339 aa21.96■■□□□ 1.11
LARP6-201ENST00000299213 NACADO15069 1562 aa21.96■■□□□ 1.11
LARP6-201ENST00000299213 WRNQ14191 1432 aaPredicted RBP eCLIP21.94■■□□□ 1.1
LARP6-201ENST00000299213 EEA1Q15075 1411 aa21.9■■□□□ 1.1
LARP6-201ENST00000299213 MIER1Q8N108 512 aa21.88■■□□□ 1.09
LARP6-201ENST00000299213 GOLGA3Q08378 1498 aa21.88■■□□□ 1.09
LARP6-201ENST00000299213 HIRIP3Q9BW71 556 aaPredicted RBP21.83■■□□□ 1.09
LARP6-201ENST00000299213 MTUS2Q5JR59 1369 aa21.82■■□□□ 1.08
LARP6-201ENST00000299213 TNIKQ9UKE5 1360 aa21.82■■□□□ 1.08
LARP6-201ENST00000299213 RTL5Q5HYW3 569 aaPredicted RBP21.82■■□□□ 1.08
LARP6-201ENST00000299213 FKBP8Q14318 412 aa21.8■■□□□ 1.08
LARP6-201ENST00000299213 SCAF1Q9H7N4 1312 aaKnown RBP21.79■■□□□ 1.08
LARP6-201ENST00000299213 BAZ1BQ9UIG0 1483 aaKnown RBP21.79■■□□□ 1.08
LARP6-201ENST00000299213 HNRNPUQ00839 825 aaKnown RBP eCLIP21.78■■□□□ 1.08
LARP6-201ENST00000299213 BAZ1AQ9NRL2 1556 aaPredicted RBP21.75■■□□□ 1.07
LARP6-201ENST00000299213 FAM9BQ8IZU0 186 aa21.73■■□□□ 1.07
LARP6-201ENST00000299213 SOGA1O94964 1423 aa21.7■■□□□ 1.07
LARP6-201ENST00000299213 RRP7BPQ9NSQ0 103 aa21.69■■□□□ 1.06
LARP6-201ENST00000299213 CEP164Q9UPV0 1460 aa21.69■■□□□ 1.06
LARP6-201ENST00000299213 MROH2BQ7Z745 1585 aa21.68■■□□□ 1.06
LARP6-201ENST00000299213 KIF27Q86VH2 1401 aa21.66■■□□□ 1.06
LARP6-201ENST00000299213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.63■■□□□ 1.05
LARP6-201ENST00000299213 CHMP7Q8WUX9 453 aaPredicted RBP21.63■■□□□ 1.05
LARP6-201ENST00000299213 SALL2Q9Y467 1007 aaPredicted RBP21.61■■□□□ 1.05
LARP6-201ENST00000299213 TSPY4P0CV99 314 aa21.6■■□□□ 1.05
LARP6-201ENST00000299213 TSPY10P0CW01 314 aa21.6■■□□□ 1.05
LARP6-201ENST00000299213 KDM2AQ9Y2K7 1162 aa21.6■■□□□ 1.05
LARP6-201ENST00000299213 CHGAP10645 457 aaKnown RBP21.58■■□□□ 1.05
LARP6-201ENST00000299213 CANXP27824 592 aaKnown RBP21.58■■□□□ 1.04
LARP6-201ENST00000299213 MRS2Q9HD23 443 aa21.55■■□□□ 1.04
LARP6-201ENST00000299213 BCL11AQ9H165 835 aa21.53■■□□□ 1.04
LARP6-201ENST00000299213 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.04
LARP6-201ENST00000299213 TMC1Q8TDI8 760 aa21.52■■□□□ 1.04
LARP6-201ENST00000299213 ABCC8Q09428 1581 aa21.51■■□□□ 1.03
LARP6-201ENST00000299213 EIF4G2P78344 907 aaKnown RBP eCLIP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms