RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 CFAP47Q6ZTR5 3102 aa8.09□□□□□ -1.11
SPRED1-201ENST00000299084 NBEAQ8NFP9 2946 aa8.08□□□□□ -1.12
SPRED1-201ENST00000299084 ADGRG4Q8IZF6 3080 aa8.07□□□□□ -1.12
SPRED1-201ENST00000299084 DMXL2Q8TDJ6 3036 aa8.06□□□□□ -1.12
SPRED1-201ENST00000299084 MYO15AQ9UKN7 3530 aa8.06□□□□□ -1.12
SPRED1-201ENST00000299084 NOTCH2NLQ7Z3S9 236 aa8.03□□□□□ -1.12
SPRED1-201ENST00000299084 A0A1B0GVY2 172 aa8.03□□□□□ -1.12
SPRED1-201ENST00000299084 UTP20O75691 2785 aaKnown RBP8.03□□□□□ -1.12
SPRED1-201ENST00000299084 PP632Q6XCG6 107 aa8.02□□□□□ -1.13
SPRED1-201ENST00000299084 TACC2O95359 2948 aa8.01□□□□□ -1.13
SPRED1-201ENST00000299084 KRTAP10-10P60014 251 aa8□□□□□ -1.13
SPRED1-201ENST00000299084 APCP25054 2843 aa7.98□□□□□ -1.13
SPRED1-201ENST00000299084 KRTAP29-1A8MX34 341 aaPredicted RBP7.98□□□□□ -1.13
SPRED1-201ENST00000299084 ATMQ13315 3056 aa7.97□□□□□ -1.13
SPRED1-201ENST00000299084 TNRC18O15417 2968 aaPredicted RBP7.97□□□□□ -1.13
SPRED1-201ENST00000299084 COL12A1Q99715 3063 aa7.97□□□□□ -1.13
SPRED1-201ENST00000299084 WDFY3Q8IZQ1 3526 aa7.97□□□□□ -1.13
SPRED1-201ENST00000299084 UBR5O95071 2799 aaPredicted RBP7.95□□□□□ -1.14
SPRED1-201ENST00000299084 ITPR1Q14643 2758 aa7.95□□□□□ -1.14
SPRED1-201ENST00000299084 NSD1Q96L73 2696 aaPredicted RBP7.95□□□□□ -1.14
SPRED1-201ENST00000299084 ASH1LQ9NR48 2969 aaKnown RBP7.94□□□□□ -1.14
SPRED1-201ENST00000299084 CRYBG3Q68DQ2 2970 aa7.94□□□□□ -1.14
SPRED1-201ENST00000299084 Q6ZRN7 208 aaPredicted RBP7.93□□□□□ -1.14
SPRED1-201ENST00000299084 KRTAP11-1Q8IUC1 163 aa7.92□□□□□ -1.14
SPRED1-201ENST00000299084 DMXL1Q9Y485 3027 aa7.91□□□□□ -1.14
SPRED1-201ENST00000299084 KRTAP4-16G5E9R7 235 aaPredicted RBP7.9□□□□□ -1.14
SPRED1-201ENST00000299084 ZZEF1O43149 2961 aa7.89□□□□□ -1.15
SPRED1-201ENST00000299084 FLNCQ14315 2725 aa7.89□□□□□ -1.15
SPRED1-201ENST00000299084 LOC400499M0QZD8 3231 aa7.87□□□□□ -1.15
SPRED1-201ENST00000299084 KRTAP21-3Q3LHN1 58 aa7.82□□□□□ -1.16
SPRED1-201ENST00000299084 KRTAP13-2Q52LG2 175 aa7.81□□□□□ -1.16
SPRED1-201ENST00000299084 ASPMQ8IZT6 3477 aa7.76□□□□□ -1.17
SPRED1-201ENST00000299084 CELSR2Q9HCU4 2923 aa7.73□□□□□ -1.17
SPRED1-201ENST00000299084 HIVEP1P15822 2718 aa7.72□□□□□ -1.17
SPRED1-201ENST00000299084 XP32Q5T750 250 aa7.67□□□□□ -1.18
SPRED1-201ENST00000299084 TPRXLQ17RH7 258 aa7.65□□□□□ -1.18
SPRED1-201ENST00000299084 ZANQ9Y493 2812 aa7.64□□□□□ -1.19
SPRED1-201ENST00000299084 HRNRQ86YZ3 2850 aaPredicted RBP7.62□□□□□ -1.19
SPRED1-201ENST00000299084 LAMA5O15230 3695 aa7.58□□□□□ -1.2
SPRED1-201ENST00000299084 FBN2P35556 2912 aa7.58□□□□□ -1.2
SPRED1-201ENST00000299084 DCHS2Q6V1P9 2916 aa7.57□□□□□ -1.2
SPRED1-201ENST00000299084 KRTAP13-1Q8IUC0 172 aa7.55□□□□□ -1.2
SPRED1-201ENST00000299084 NBPF19A0A087WUL8 3843 aa7.55□□□□□ -1.2
SPRED1-201ENST00000299084 DCHS1Q96JQ0 3298 aa7.54□□□□□ -1.2
SPRED1-201ENST00000299084 RELNP78509 3460 aa7.52□□□□□ -1.21
SPRED1-201ENST00000299084 DMDP11532 3685 aa7.51□□□□□ -1.21
SPRED1-201ENST00000299084 ZFHX4Q86UP3 3567 aa7.5□□□□□ -1.21
SPRED1-201ENST00000299084 NF1P21359 2839 aa7.49□□□□□ -1.21
SPRED1-201ENST00000299084 H0YAA0 97 aa7.48□□□□□ -1.21
SPRED1-201ENST00000299084 KRTAP7-1Q8IUC3 87 aa7.47□□□□□ -1.21
SPRED1-201ENST00000299084 CELSR1Q9NYQ6 3014 aa7.46□□□□□ -1.21
SPRED1-201ENST00000299084 NIPBLQ6KC79 2804 aaeCLIP7.46□□□□□ -1.22
SPRED1-201ENST00000299084 CSMD1Q96PZ7 3565 aa7.44□□□□□ -1.22
SPRED1-201ENST00000299084 TENM1Q9UKZ4 2725 aa7.35□□□□□ -1.23
SPRED1-201ENST00000299084 TENM4Q6N022 2769 aa7.34□□□□□ -1.23
SPRED1-201ENST00000299084 KRTAP12-2P59991 146 aa7.32□□□□□ -1.24
SPRED1-201ENST00000299084 SMG1Q96Q15 3661 aaKnown RBP7.31□□□□□ -1.24
SPRED1-201ENST00000299084 KRTAP13-3Q3SY46 172 aa7.29□□□□□ -1.24
SPRED1-201ENST00000299084 MXRA5Q9NR99 2828 aa7.27□□□□□ -1.25
SPRED1-201ENST00000299084 SPENQ96T58 3664 aaKnown RBP7.27□□□□□ -1.25
SPRED1-201ENST00000299084 KRTAP1-4P0C5Y4 121 aa7.26□□□□□ -1.25
SPRED1-201ENST00000299084 TENM3Q9P273 2699 aa7.24□□□□□ -1.25
SPRED1-201ENST00000299084 MUC3AQ02505 3323 aa7.23□□□□□ -1.25
SPRED1-201ENST00000299084 KRTAP15-1Q3LI76 137 aa7.21□□□□□ -1.25
SPRED1-201ENST00000299084 ZFHX3Q15911 3703 aa7.16□□□□□ -1.26
SPRED1-201ENST00000299084 SVEP1Q4LDE5 3571 aa7.16□□□□□ -1.26
SPRED1-201ENST00000299084 KRTAP13-4Q3LI77 160 aa7.1□□□□□ -1.27
SPRED1-201ENST00000299084 PDZD2O15018 2839 aa7.09□□□□□ -1.27
SPRED1-201ENST00000299084 PKD1L1Q8TDX9 2849 aa7.07□□□□□ -1.28
SPRED1-201ENST00000299084 TGP01266 2768 aa7.07□□□□□ -1.28
SPRED1-201ENST00000299084 CRCT1Q9UGL9 99 aa7.06□□□□□ -1.28
SPRED1-201ENST00000299084 CUBNO60494 3623 aa7.03□□□□□ -1.28
SPRED1-201ENST00000299084 BSNQ9UPA5 3926 aa7.03□□□□□ -1.28
SPRED1-201ENST00000299084 VWFP04275 2813 aa7.02□□□□□ -1.29
SPRED1-201ENST00000299084 TENM2Q9NT68 2774 aa6.96□□□□□ -1.3
SPRED1-201ENST00000299084 VPS13CQ709C8 3753 aa6.88□□□□□ -1.31
SPRED1-201ENST00000299084 CSMD2Q7Z408 3487 aa6.87□□□□□ -1.31
SPRED1-201ENST00000299084 FBN1P35555 2871 aaKnown RBP6.86□□□□□ -1.31
SPRED1-201ENST00000299084 TRRAPQ9Y4A5 3859 aa6.85□□□□□ -1.31
SPRED1-201ENST00000299084 INE1O15225 51 aa6.84□□□□□ -1.31
SPRED1-201ENST00000299084 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
SPRED1-201ENST00000299084 KRTAP10-12P60413 245 aa6.71□□□□□ -1.34
SPRED1-201ENST00000299084 KRTAP10-6P60371 365 aaPredicted RBP6.67□□□□□ -1.34
SPRED1-201ENST00000299084 OTOGQ6ZRI0 2925 aa6.66□□□□□ -1.34
SPRED1-201ENST00000299084 ANK3Q12955 4377 aaKnown RBP6.64□□□□□ -1.35
SPRED1-201ENST00000299084 COL7A1Q02388 2944 aa6.63□□□□□ -1.35
SPRED1-201ENST00000299084 FBN3Q75N90 2809 aa6.59□□□□□ -1.35
SPRED1-201ENST00000299084 SRRM2Q9UQ35 2752 aaKnown RBP6.58□□□□□ -1.36
SPRED1-201ENST00000299084 MEGF8Q7Z7M0 2845 aa6.56□□□□□ -1.36
SPRED1-201ENST00000299084 AKAP9Q99996 3911 aa6.54□□□□□ -1.36
SPRED1-201ENST00000299084 ZNF469Q96JG9 3925 aaPredicted RBP6.52□□□□□ -1.37
SPRED1-201ENST00000299084 CSMD3Q7Z407 3707 aa6.47□□□□□ -1.37
SPRED1-201ENST00000299084 KRTAP10-5P60370 271 aa6.43□□□□□ -1.38
SPRED1-201ENST00000299084 KRTAP8-1Q8IUC2 63 aa6.4□□□□□ -1.38
SPRED1-201ENST00000299084 KRTAP12-3P60328 96 aa6.39□□□□□ -1.39
SPRED1-201ENST00000299084 LORP23490 312 aaPredicted RBP6.38□□□□□ -1.39
SPRED1-201ENST00000299084 KRTAP3-1Q9BYR8 98 aa6.38□□□□□ -1.39
SPRED1-201ENST00000299084 HUWE1Q7Z6Z7 4374 aaKnown RBP6.32□□□□□ -1.4
SPRED1-201ENST00000299084 LCE3AQ5TA76 89 aa6.18□□□□□ -1.42
SPRED1-201ENST00000299084 ALMS1Q8TCU4 4167 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms