RNA–Protein interactions for RNA: ENST00000298355.7

TRIM9-201, Transcript of tripartite motif containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM9, Length 5,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-201ENST00000298355 ITPR2Q14571 2701 aa9.8□□□□□ -0.84
TRIM9-201ENST00000298355 DMBT1Q9UGM3 2413 aaPredicted RBP9.8□□□□□ -0.84
TRIM9-201ENST00000298355 KRTAP13-1Q8IUC0 172 aa9.78□□□□□ -0.84
TRIM9-201ENST00000298355 FLG2Q5D862 2391 aaPredicted RBP9.76□□□□□ -0.85
TRIM9-201ENST00000298355 ASH1LQ9NR48 2969 aaKnown RBP9.76□□□□□ -0.85
TRIM9-201ENST00000298355 LOC400499M0QZD8 3231 aa9.74□□□□□ -0.85
TRIM9-201ENST00000298355 USP34Q70CQ2 3546 aa9.73□□□□□ -0.85
TRIM9-201ENST00000298355 APCP25054 2843 aa9.71□□□□□ -0.86
TRIM9-201ENST00000298355 CFAP47Q6ZTR5 3102 aa9.71□□□□□ -0.86
TRIM9-201ENST00000298355 ZANQ9Y493 2812 aa9.7□□□□□ -0.86
TRIM9-201ENST00000298355 HRNRQ86YZ3 2850 aaPredicted RBP9.68□□□□□ -0.86
TRIM9-201ENST00000298355 NSD1Q96L73 2696 aaPredicted RBP9.67□□□□□ -0.86
TRIM9-201ENST00000298355 HIVEP1P15822 2718 aa9.65□□□□□ -0.86
TRIM9-201ENST00000298355 PLAC4Q8WY50 150 aa9.62□□□□□ -0.87
TRIM9-201ENST00000298355 MYO15AQ9UKN7 3530 aa9.62□□□□□ -0.87
TRIM9-201ENST00000298355 C20orf166-AS1Q96NR2 134 aa9.57□□□□□ -0.88
TRIM9-201ENST00000298355 NIPBLQ6KC79 2804 aaeCLIP9.55□□□□□ -0.88
TRIM9-201ENST00000298355 M0QZ58 72 aa9.55□□□□□ -0.88
TRIM9-201ENST00000298355 KMT2BQ9UMN6 2715 aaPredicted RBP9.55□□□□□ -0.88
TRIM9-201ENST00000298355 STAB2Q8WWQ8 2551 aa9.53□□□□□ -0.88
TRIM9-201ENST00000298355 H0YAA0 97 aa9.53□□□□□ -0.88
TRIM9-201ENST00000298355 KRTAP10-1P60331 282 aa9.52□□□□□ -0.89
TRIM9-201ENST00000298355 KRTAP10-2P60368 255 aa9.52□□□□□ -0.89
TRIM9-201ENST00000298355 Q6ZRN7 208 aaPredicted RBP9.51□□□□□ -0.89
TRIM9-201ENST00000298355 CELSR2Q9HCU4 2923 aa9.5□□□□□ -0.89
TRIM9-201ENST00000298355 KRTAP13-2Q52LG2 175 aa9.5□□□□□ -0.89
TRIM9-201ENST00000298355 Q5VSD8 79 aa9.43□□□□□ -0.9
TRIM9-201ENST00000298355 NF1P21359 2839 aa9.42□□□□□ -0.9
TRIM9-201ENST00000298355 RPS29P62273 56 aaKnown RBP9.41□□□□□ -0.9
TRIM9-201ENST00000298355 CRYBG3Q68DQ2 2970 aa9.4□□□□□ -0.9
TRIM9-201ENST00000298355 C10orf95Q9H7T3 257 aa9.4□□□□□ -0.91
TRIM9-201ENST00000298355 FBN2P35556 2912 aa9.4□□□□□ -0.91
TRIM9-201ENST00000298355 DCHS2Q6V1P9 2916 aa9.39□□□□□ -0.91
TRIM9-201ENST00000298355 KRTAP13-3Q3SY46 172 aa9.29□□□□□ -0.92
TRIM9-201ENST00000298355 MXRA5Q9NR99 2828 aa9.27□□□□□ -0.93
TRIM9-201ENST00000298355 RELNP78509 3460 aa9.26□□□□□ -0.93
TRIM9-201ENST00000298355 WDFY3Q8IZQ1 3526 aa9.24□□□□□ -0.93
TRIM9-201ENST00000298355 TENM4Q6N022 2769 aa9.22□□□□□ -0.93
TRIM9-201ENST00000298355 P0C880 135 aa9.2□□□□□ -0.94
TRIM9-201ENST00000298355 MUC3AQ02505 3323 aa9.15□□□□□ -0.95
TRIM9-201ENST00000298355 LAMA5O15230 3695 aa9.14□□□□□ -0.95
TRIM9-201ENST00000298355 DCHS1Q96JQ0 3298 aa9.11□□□□□ -0.95
TRIM9-201ENST00000298355 DMDP11532 3685 aa9.1□□□□□ -0.95
TRIM9-201ENST00000298355 ASPMQ8IZT6 3477 aa9.07□□□□□ -0.96
TRIM9-201ENST00000298355 ZFHX4Q86UP3 3567 aa9.05□□□□□ -0.96
TRIM9-201ENST00000298355 TNP1P09430 55 aa9.04□□□□□ -0.96
TRIM9-201ENST00000298355 KRTAP1-4P0C5Y4 121 aa9.03□□□□□ -0.96
TRIM9-201ENST00000298355 PP632Q6XCG6 107 aa8.99□□□□□ -0.97
TRIM9-201ENST00000298355 CSMD1Q96PZ7 3565 aa8.97□□□□□ -0.97
TRIM9-201ENST00000298355 TGP01266 2768 aa8.96□□□□□ -0.97
TRIM9-201ENST00000298355 CELSR1Q9NYQ6 3014 aa8.96□□□□□ -0.98
TRIM9-201ENST00000298355 TENM3Q9P273 2699 aa8.95□□□□□ -0.98
TRIM9-201ENST00000298355 PDZD2O15018 2839 aa8.94□□□□□ -0.98
TRIM9-201ENST00000298355 KRTAP21-3Q3LHN1 58 aa8.94□□□□□ -0.98
TRIM9-201ENST00000298355 TPRXLQ17RH7 258 aa8.91□□□□□ -0.98
TRIM9-201ENST00000298355 KRTAP10-8P60410 259 aa8.88□□□□□ -0.99
TRIM9-201ENST00000298355 TENM1Q9UKZ4 2725 aa8.86□□□□□ -0.99
TRIM9-201ENST00000298355 SMG1Q96Q15 3661 aaKnown RBP8.83□□□□□ -1
TRIM9-201ENST00000298355 KRTAP12-2P59991 146 aa8.75□□□□□ -1.01
TRIM9-201ENST00000298355 OTOGQ6ZRI0 2925 aa8.72□□□□□ -1.01
TRIM9-201ENST00000298355 VWFP04275 2813 aa8.72□□□□□ -1.01
TRIM9-201ENST00000298355 XP32Q5T750 250 aa8.7□□□□□ -1.02
TRIM9-201ENST00000298355 KRTAP3-1Q9BYR8 98 aa8.66□□□□□ -1.02
TRIM9-201ENST00000298355 NBPF19A0A087WUL8 3843 aa8.65□□□□□ -1.02
TRIM9-201ENST00000298355 TENM2Q9NT68 2774 aa8.63□□□□□ -1.03
TRIM9-201ENST00000298355 FBN1P35555 2871 aaKnown RBP8.62□□□□□ -1.03
TRIM9-201ENST00000298355 KRTAP15-1Q3LI76 137 aa8.62□□□□□ -1.03
TRIM9-201ENST00000298355 KRTAP12-1P59990 96 aa8.61□□□□□ -1.03
TRIM9-201ENST00000298355 SVEP1Q4LDE5 3571 aa8.58□□□□□ -1.04
TRIM9-201ENST00000298355 SPENQ96T58 3664 aaKnown RBP8.55□□□□□ -1.04
TRIM9-201ENST00000298355 PKD1L1Q8TDX9 2849 aa8.54□□□□□ -1.04
TRIM9-201ENST00000298355 KRTAP13-4Q3LI77 160 aa8.53□□□□□ -1.04
TRIM9-201ENST00000298355 PRO2289Q9P1D8 64 aa8.52□□□□□ -1.05
TRIM9-201ENST00000298355 ANK3Q12955 4377 aaKnown RBP8.5□□□□□ -1.05
TRIM9-201ENST00000298355 KRTAP10-6P60371 365 aaPredicted RBP8.49□□□□□ -1.05
TRIM9-201ENST00000298355 BSNQ9UPA5 3926 aa8.49□□□□□ -1.05
TRIM9-201ENST00000298355 ZFHX3Q15911 3703 aa8.46□□□□□ -1.06
TRIM9-201ENST00000298355 CSMD2Q7Z408 3487 aa8.4□□□□□ -1.06
TRIM9-201ENST00000298355 SRRM2Q9UQ35 2752 aaKnown RBP8.36□□□□□ -1.07
TRIM9-201ENST00000298355 CUBNO60494 3623 aa8.32□□□□□ -1.08
TRIM9-201ENST00000298355 A0A1B0GVY2 172 aa8.28□□□□□ -1.08
TRIM9-201ENST00000298355 TRRAPQ9Y4A5 3859 aa8.26□□□□□ -1.09
TRIM9-201ENST00000298355 KRTAP10-10P60014 251 aa8.25□□□□□ -1.09
TRIM9-201ENST00000298355 KRTAP3-2Q9BYR7 98 aa8.21□□□□□ -1.09
TRIM9-201ENST00000298355 FBN3Q75N90 2809 aa8.15□□□□□ -1.11
TRIM9-201ENST00000298355 KRTAP3-3Q9BYR6 98 aa8.12□□□□□ -1.11
TRIM9-201ENST00000298355 MEGF8Q7Z7M0 2845 aa8.07□□□□□ -1.12
TRIM9-201ENST00000298355 INE1O15225 51 aa8□□□□□ -1.13
TRIM9-201ENST00000298355 VPS13CQ709C8 3753 aa7.98□□□□□ -1.13
TRIM9-201ENST00000298355 COL7A1Q02388 2944 aa7.92□□□□□ -1.14
TRIM9-201ENST00000298355 HUWE1Q7Z6Z7 4374 aaKnown RBP7.89□□□□□ -1.15
TRIM9-201ENST00000298355 ZNF469Q96JG9 3925 aaPredicted RBP7.83□□□□□ -1.16
TRIM9-201ENST00000298355 AKAP9Q99996 3911 aa7.7□□□□□ -1.18
TRIM9-201ENST00000298355 ALMS1Q8TCU4 4167 aa7.65□□□□□ -1.19
TRIM9-201ENST00000298355 KRTAP10-4P60372 401 aaPredicted RBP7.63□□□□□ -1.19
TRIM9-201ENST00000298355 MT1HL1P0DM35 61 aa7.61□□□□□ -1.19
TRIM9-201ENST00000298355 DNAH9Q9NYC9 4486 aa7.6□□□□□ -1.19
TRIM9-201ENST00000298355 KRTAP23-1A1A580 65 aa7.6□□□□□ -1.19
TRIM9-201ENST00000298355 CSMD3Q7Z407 3707 aa7.5□□□□□ -1.21
TRIM9-201ENST00000298355 LORP23490 312 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms