RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 KRTAP10-10P60014 251 aa3.72□□□□□ -1.81
GAPVD1-202ENST00000297933 TACC2O95359 2948 aa3.72□□□□□ -1.81
GAPVD1-202ENST00000297933 TENM4Q6N022 2769 aa3.7□□□□□ -1.82
GAPVD1-202ENST00000297933 COL6A3P12111 3177 aa3.7□□□□□ -1.82
GAPVD1-202ENST00000297933 DMXL2Q8TDJ6 3036 aa3.69□□□□□ -1.82
GAPVD1-202ENST00000297933 UTP20O75691 2785 aaKnown RBP3.69□□□□□ -1.82
GAPVD1-202ENST00000297933 PRO2289Q9P1D8 64 aa3.67□□□□□ -1.82
GAPVD1-202ENST00000297933 EYSQ5T1H1 3165 aa3.66□□□□□ -1.82
GAPVD1-202ENST00000297933 APCP25054 2843 aa3.66□□□□□ -1.82
GAPVD1-202ENST00000297933 KRTAP25-1Q3LHN0 102 aa3.66□□□□□ -1.82
GAPVD1-202ENST00000297933 CELSR3Q9NYQ7 3312 aa3.65□□□□□ -1.82
GAPVD1-202ENST00000297933 LCE2DQ5TA82 110 aaPredicted RBP3.65□□□□□ -1.83
GAPVD1-202ENST00000297933 LAMA1P25391 3075 aa3.64□□□□□ -1.83
GAPVD1-202ENST00000297933 C10orf95Q9H7T3 257 aa3.64□□□□□ -1.83
GAPVD1-202ENST00000297933 CRYBG3Q68DQ2 2970 aa3.64□□□□□ -1.83
GAPVD1-202ENST00000297933 BOD1L1Q8NFC6 3051 aa3.63□□□□□ -1.83
GAPVD1-202ENST00000297933 VCANP13611 3396 aa3.63□□□□□ -1.83
GAPVD1-202ENST00000297933 KRTAP13-3Q3SY46 172 aa3.63□□□□□ -1.83
GAPVD1-202ENST00000297933 NBEAQ8NFP9 2946 aa3.62□□□□□ -1.83
GAPVD1-202ENST00000297933 H3BS24 57 aa3.62□□□□□ -1.83
GAPVD1-202ENST00000297933 LRBAP50851 2863 aa3.61□□□□□ -1.83
GAPVD1-202ENST00000297933 ADGRG4Q8IZF6 3080 aa3.6□□□□□ -1.83
GAPVD1-202ENST00000297933 PP632Q6XCG6 107 aa3.59□□□□□ -1.83
GAPVD1-202ENST00000297933 ZZEF1O43149 2961 aa3.59□□□□□ -1.84
GAPVD1-202ENST00000297933 KALRNO60229 2985 aa3.59□□□□□ -1.84
GAPVD1-202ENST00000297933 NIPBLQ6KC79 2804 aaeCLIP3.58□□□□□ -1.845e-8■□□□□ 8.6
GAPVD1-202ENST00000297933 DMXL1Q9Y485 3027 aa3.57□□□□□ -1.84
GAPVD1-202ENST00000297933 A6NN06 94 aa3.56□□□□□ -1.84
GAPVD1-202ENST00000297933 FREM2Q5SZK8 3169 aa3.55□□□□□ -1.84
GAPVD1-202ENST00000297933 SPTBN5Q9NRC6 3674 aaKnown RBP3.55□□□□□ -1.84
GAPVD1-202ENST00000297933 DNAH14Q0VDD8 3507 aa3.54□□□□□ -1.84
GAPVD1-202ENST00000297933 KRTAP16-1A8MUX0 517 aa3.54□□□□□ -1.84
GAPVD1-202ENST00000297933 USP34Q70CQ2 3546 aa3.53□□□□□ -1.84
GAPVD1-202ENST00000297933 CELSR2Q9HCU4 2923 aa3.53□□□□□ -1.84
GAPVD1-202ENST00000297933 ZANQ9Y493 2812 aa3.51□□□□□ -1.85
GAPVD1-202ENST00000297933 DCHS2Q6V1P9 2916 aa3.51□□□□□ -1.85
GAPVD1-202ENST00000297933 CFAP47Q6ZTR5 3102 aa3.51□□□□□ -1.85
GAPVD1-202ENST00000297933 ASH1LQ9NR48 2969 aaKnown RBP3.5□□□□□ -1.85
GAPVD1-202ENST00000297933 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
GAPVD1-202ENST00000297933 P0C880 135 aa3.47□□□□□ -1.85
GAPVD1-202ENST00000297933 NF1P21359 2839 aa3.47□□□□□ -1.85
GAPVD1-202ENST00000297933 H0YAA0 97 aa3.46□□□□□ -1.86
GAPVD1-202ENST00000297933 HRNRQ86YZ3 2850 aaPredicted RBP3.45□□□□□ -1.86
GAPVD1-202ENST00000297933 SPEGQ15772 3267 aa3.45□□□□□ -1.86
GAPVD1-202ENST00000297933 TENM2Q9NT68 2774 aa3.43□□□□□ -1.86
GAPVD1-202ENST00000297933 MXRA5Q9NR99 2828 aa3.42□□□□□ -1.86
GAPVD1-202ENST00000297933 TENM1Q9UKZ4 2725 aa3.41□□□□□ -1.86
GAPVD1-202ENST00000297933 TENM3Q9P273 2699 aa3.4□□□□□ -1.86
GAPVD1-202ENST00000297933 LOC400499M0QZD8 3231 aa3.4□□□□□ -1.87
GAPVD1-202ENST00000297933 FBN2P35556 2912 aa3.39□□□□□ -1.87
GAPVD1-202ENST00000297933 PKD1L1Q8TDX9 2849 aa3.33□□□□□ -1.88
GAPVD1-202ENST00000297933 PDZD2O15018 2839 aa3.33□□□□□ -1.88
GAPVD1-202ENST00000297933 MYO15AQ9UKN7 3530 aa3.33□□□□□ -1.88
GAPVD1-202ENST00000297933 DCHS1Q96JQ0 3298 aa3.32□□□□□ -1.88
GAPVD1-202ENST00000297933 CELSR1Q9NYQ6 3014 aa3.32□□□□□ -1.88
GAPVD1-202ENST00000297933 KRTAP12-2P59991 146 aa3.32□□□□□ -1.88
GAPVD1-202ENST00000297933 KRTAP13-4Q3LI77 160 aa3.3□□□□□ -1.88
GAPVD1-202ENST00000297933 RELNP78509 3460 aa3.3□□□□□ -1.88
GAPVD1-202ENST00000297933 OTOGQ6ZRI0 2925 aa3.28□□□□□ -1.88
GAPVD1-202ENST00000297933 VWFP04275 2813 aa3.25□□□□□ -1.89
GAPVD1-202ENST00000297933 KRTAP15-1Q3LI76 137 aa3.25□□□□□ -1.89
GAPVD1-202ENST00000297933 NBPF19A0A087WUL8 3843 aa3.25□□□□□ -1.89
GAPVD1-202ENST00000297933 MT1HL1P0DM35 61 aa3.24□□□□□ -1.89
GAPVD1-202ENST00000297933 KRTAP12-1P59990 96 aa3.24□□□□□ -1.89
GAPVD1-202ENST00000297933 WDFY3Q8IZQ1 3526 aa3.23□□□□□ -1.89
GAPVD1-202ENST00000297933 MUC3AQ02505 3323 aa3.22□□□□□ -1.89
GAPVD1-202ENST00000297933 TGP01266 2768 aa3.22□□□□□ -1.89
GAPVD1-202ENST00000297933 KRTAP3-1Q9BYR8 98 aa3.22□□□□□ -1.89
GAPVD1-202ENST00000297933 LAMA5O15230 3695 aa3.21□□□□□ -1.9
GAPVD1-202ENST00000297933 KRTAP4-5Q9BYR2 181 aa3.21□□□□□ -1.9
GAPVD1-202ENST00000297933 FBN1P35555 2871 aaKnown RBP3.2□□□□□ -1.9
GAPVD1-202ENST00000297933 ZFHX3Q15911 3703 aa3.2□□□□□ -1.9
GAPVD1-202ENST00000297933 ASPMQ8IZT6 3477 aa3.19□□□□□ -1.9
GAPVD1-202ENST00000297933 ANK3Q12955 4377 aaKnown RBP3.16□□□□□ -1.9
GAPVD1-202ENST00000297933 CRCT1Q9UGL9 99 aa3.15□□□□□ -1.91
GAPVD1-202ENST00000297933 KRTAP3-3Q9BYR6 98 aa3.15□□□□□ -1.91
GAPVD1-202ENST00000297933 KRTAP3-2Q9BYR7 98 aa3.15□□□□□ -1.91
GAPVD1-202ENST00000297933 DMDP11532 3685 aa3.13□□□□□ -1.91
GAPVD1-202ENST00000297933 KRTAP10-12P60413 245 aa3.13□□□□□ -1.91
GAPVD1-202ENST00000297933 SRRM2Q9UQ35 2752 aaKnown RBP3.11□□□□□ -1.91
GAPVD1-202ENST00000297933 ZFHX4Q86UP3 3567 aa3.11□□□□□ -1.91
GAPVD1-202ENST00000297933 ALMS1Q8TCU4 4167 aa3.1□□□□□ -1.91
GAPVD1-202ENST00000297933 KRTAP10-6P60371 365 aaPredicted RBP3.1□□□□□ -1.91
GAPVD1-202ENST00000297933 KRTAP10-4P60372 401 aaPredicted RBP3.09□□□□□ -1.91
GAPVD1-202ENST00000297933 SMG1Q96Q15 3661 aaKnown RBP3.08□□□□□ -1.92
GAPVD1-202ENST00000297933 CSMD1Q96PZ7 3565 aa3.06□□□□□ -1.92
GAPVD1-202ENST00000297933 FBN3Q75N90 2809 aa3.06□□□□□ -1.92
GAPVD1-202ENST00000297933 CSMD2Q7Z408 3487 aa3.05□□□□□ -1.92
GAPVD1-202ENST00000297933 HUWE1Q7Z6Z7 4374 aaKnown RBP3.02□□□□□ -1.93
GAPVD1-202ENST00000297933 KRTAP8-1Q8IUC2 63 aa3□□□□□ -1.93
GAPVD1-202ENST00000297933 TRRAPQ9Y4A5 3859 aa2.99□□□□□ -1.93
GAPVD1-202ENST00000297933 KRTAP12-3P60328 96 aa2.99□□□□□ -1.93
GAPVD1-202ENST00000297933 MEGF8Q7Z7M0 2845 aa2.98□□□□□ -1.93
GAPVD1-202ENST00000297933 LORP23490 312 aaPredicted RBP2.98□□□□□ -1.93
GAPVD1-202ENST00000297933 SPENQ96T58 3664 aaKnown RBP2.96□□□□□ -1.94
GAPVD1-202ENST00000297933 COL7A1Q02388 2944 aa2.95□□□□□ -1.94
GAPVD1-202ENST00000297933 LCE3AQ5TA76 89 aa2.95□□□□□ -1.94
GAPVD1-202ENST00000297933 SVEP1Q4LDE5 3571 aa2.93□□□□□ -1.94
GAPVD1-202ENST00000297933 BSNQ9UPA5 3926 aa2.9□□□□□ -1.95
GAPVD1-202ENST00000297933 KRTAP23-1A1A580 65 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 256.5 ms