RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 HIVEP1P15822 2718 aa9.53□□□□□ -0.88
CNTNAP3-201ENST00000297668 CELSR3Q9NYQ7 3312 aa9.52□□□□□ -0.89
CNTNAP3-201ENST00000297668 APCP25054 2843 aa9.52□□□□□ -0.89
CNTNAP3-201ENST00000297668 PLAC4Q8WY50 150 aa9.51□□□□□ -0.89
CNTNAP3-201ENST00000297668 ATMQ13315 3056 aa9.5□□□□□ -0.89
CNTNAP3-201ENST00000297668 KRTAP13-1Q8IUC0 172 aa9.5□□□□□ -0.89
CNTNAP3-201ENST00000297668 REV3LO60673 3130 aa9.5□□□□□ -0.89
CNTNAP3-201ENST00000297668 KRTAP13-2Q52LG2 175 aa9.48□□□□□ -0.89
CNTNAP3-201ENST00000297668 NIPBLQ6KC79 2804 aaeCLIP9.45□□□□□ -0.9
CNTNAP3-201ENST00000297668 KMT2BQ9UMN6 2715 aaPredicted RBP9.45□□□□□ -0.9
CNTNAP3-201ENST00000297668 COL12A1Q99715 3063 aa9.45□□□□□ -0.9
CNTNAP3-201ENST00000297668 TENM4Q6N022 2769 aa9.41□□□□□ -0.9
CNTNAP3-201ENST00000297668 A8MUU9 505 aa9.39□□□□□ -0.91
CNTNAP3-201ENST00000297668 SPTBN5Q9NRC6 3674 aaKnown RBP9.38□□□□□ -0.91
CNTNAP3-201ENST00000297668 FRYLO94915 3013 aa9.38□□□□□ -0.91
CNTNAP3-201ENST00000297668 ADGRG4Q8IZF6 3080 aa9.37□□□□□ -0.91
CNTNAP3-201ENST00000297668 CELSR2Q9HCU4 2923 aa9.36□□□□□ -0.91
CNTNAP3-201ENST00000297668 C20orf166-AS1Q96NR2 134 aa9.36□□□□□ -0.91
CNTNAP3-201ENST00000297668 LRBAP50851 2863 aa9.3□□□□□ -0.92
CNTNAP3-201ENST00000297668 BOD1L1Q8NFC6 3051 aa9.29□□□□□ -0.92
CNTNAP3-201ENST00000297668 ZZEF1O43149 2961 aa9.25□□□□□ -0.93
CNTNAP3-201ENST00000297668 DCHS2Q6V1P9 2916 aa9.21□□□□□ -0.93
CNTNAP3-201ENST00000297668 CRYBG3Q68DQ2 2970 aa9.2□□□□□ -0.94
CNTNAP3-201ENST00000297668 TENM3Q9P273 2699 aa9.15□□□□□ -0.94
CNTNAP3-201ENST00000297668 ZANQ9Y493 2812 aa9.14□□□□□ -0.95
CNTNAP3-201ENST00000297668 COL6A3P12111 3177 aa9.12□□□□□ -0.95
CNTNAP3-201ENST00000297668 WDFY3Q8IZQ1 3526 aa9.11□□□□□ -0.95
CNTNAP3-201ENST00000297668 TNP1P09430 55 aa9.08□□□□□ -0.96
CNTNAP3-201ENST00000297668 CFAP47Q6ZTR5 3102 aa9.06□□□□□ -0.96
CNTNAP3-201ENST00000297668 KRTAP1-4P0C5Y4 121 aa9.01□□□□□ -0.97
CNTNAP3-201ENST00000297668 MUC3AQ02505 3323 aa8.98□□□□□ -0.97
CNTNAP3-201ENST00000297668 NF1P21359 2839 aa8.98□□□□□ -0.97
CNTNAP3-201ENST00000297668 TENM1Q9UKZ4 2725 aa8.96□□□□□ -0.98
CNTNAP3-201ENST00000297668 LOC400499M0QZD8 3231 aa8.95□□□□□ -0.98
CNTNAP3-201ENST00000297668 KRTAP21-3Q3LHN1 58 aa8.94□□□□□ -0.98
CNTNAP3-201ENST00000297668 XP32Q5T750 250 aa8.93□□□□□ -0.98
CNTNAP3-201ENST00000297668 C10orf95Q9H7T3 257 aa8.93□□□□□ -0.98
CNTNAP3-201ENST00000297668 DMDP11532 3685 aa8.93□□□□□ -0.98
CNTNAP3-201ENST00000297668 ASPMQ8IZT6 3477 aa8.91□□□□□ -0.98
CNTNAP3-201ENST00000297668 FBN2P35556 2912 aa8.9□□□□□ -0.98
CNTNAP3-201ENST00000297668 PP632Q6XCG6 107 aa8.87□□□□□ -0.99
CNTNAP3-201ENST00000297668 H0YAA0 97 aa8.86□□□□□ -0.99
CNTNAP3-201ENST00000297668 TNRC18O15417 2968 aaPredicted RBP8.83□□□□□ -1
CNTNAP3-201ENST00000297668 DCHS1Q96JQ0 3298 aa8.81□□□□□ -1
CNTNAP3-201ENST00000297668 P0C880 135 aa8.81□□□□□ -1
CNTNAP3-201ENST00000297668 HRNRQ86YZ3 2850 aaPredicted RBP8.8□□□□□ -1
CNTNAP3-201ENST00000297668 KRTAP10-8P60410 259 aa8.78□□□□□ -1
CNTNAP3-201ENST00000297668 ZFHX4Q86UP3 3567 aa8.76□□□□□ -1.01
CNTNAP3-201ENST00000297668 TGP01266 2768 aa8.74□□□□□ -1.01
CNTNAP3-201ENST00000297668 A0A1B0GVY2 172 aa8.72□□□□□ -1.01
CNTNAP3-201ENST00000297668 TPRXLQ17RH7 258 aa8.72□□□□□ -1.01
CNTNAP3-201ENST00000297668 TENM2Q9NT68 2774 aa8.71□□□□□ -1.02
CNTNAP3-201ENST00000297668 LAMA5O15230 3695 aa8.69□□□□□ -1.02
CNTNAP3-201ENST00000297668 PKD1L1Q8TDX9 2849 aa8.66□□□□□ -1.02
CNTNAP3-201ENST00000297668 DMXL1Q9Y485 3027 aa8.65□□□□□ -1.02
CNTNAP3-201ENST00000297668 CELSR1Q9NYQ6 3014 aa8.64□□□□□ -1.03
CNTNAP3-201ENST00000297668 KRTAP13-3Q3SY46 172 aa8.61□□□□□ -1.03
CNTNAP3-201ENST00000297668 PDZD2O15018 2839 aa8.59□□□□□ -1.04
CNTNAP3-201ENST00000297668 MXRA5Q9NR99 2828 aa8.58□□□□□ -1.04
CNTNAP3-201ENST00000297668 KRTAP10-10P60014 251 aa8.54□□□□□ -1.04
CNTNAP3-201ENST00000297668 SMG1Q96Q15 3661 aaKnown RBP8.54□□□□□ -1.04
CNTNAP3-201ENST00000297668 VWFP04275 2813 aa8.51□□□□□ -1.05
CNTNAP3-201ENST00000297668 RELNP78509 3460 aa8.48□□□□□ -1.05
CNTNAP3-201ENST00000297668 PRO2289Q9P1D8 64 aa8.42□□□□□ -1.06
CNTNAP3-201ENST00000297668 CSMD1Q96PZ7 3565 aa8.4□□□□□ -1.06
CNTNAP3-201ENST00000297668 SVEP1Q4LDE5 3571 aa8.35□□□□□ -1.07
CNTNAP3-201ENST00000297668 SRRM2Q9UQ35 2752 aaKnown RBP8.31□□□□□ -1.08
CNTNAP3-201ENST00000297668 SPENQ96T58 3664 aaKnown RBP8.3□□□□□ -1.08
CNTNAP3-201ENST00000297668 KRTAP12-2P59991 146 aa8.29□□□□□ -1.08
CNTNAP3-201ENST00000297668 FBN1P35555 2871 aaKnown RBP8.2□□□□□ -1.1
CNTNAP3-201ENST00000297668 KRTAP12-1P59990 96 aa8.18□□□□□ -1.1
CNTNAP3-201ENST00000297668 CUBNO60494 3623 aa8.17□□□□□ -1.1
CNTNAP3-201ENST00000297668 KRTAP13-4Q3LI77 160 aa8.17□□□□□ -1.1
CNTNAP3-201ENST00000297668 KRTAP3-1Q9BYR8 98 aa8.14□□□□□ -1.11
CNTNAP3-201ENST00000297668 FBN3Q75N90 2809 aa8.05□□□□□ -1.12
CNTNAP3-201ENST00000297668 KRTAP15-1Q3LI76 137 aa8.04□□□□□ -1.12
CNTNAP3-201ENST00000297668 MEGF8Q7Z7M0 2845 aa7.95□□□□□ -1.14
CNTNAP3-201ENST00000297668 KRTAP10-6P60371 365 aaPredicted RBP7.94□□□□□ -1.14
CNTNAP3-201ENST00000297668 INE1O15225 51 aa7.91□□□□□ -1.14
CNTNAP3-201ENST00000297668 COL7A1Q02388 2944 aa7.9□□□□□ -1.14
CNTNAP3-201ENST00000297668 OTOGQ6ZRI0 2925 aa7.9□□□□□ -1.15
CNTNAP3-201ENST00000297668 BSNQ9UPA5 3926 aa7.89□□□□□ -1.15
CNTNAP3-201ENST00000297668 CSMD2Q7Z408 3487 aa7.79□□□□□ -1.16
CNTNAP3-201ENST00000297668 ZFHX3Q15911 3703 aa7.75□□□□□ -1.17
CNTNAP3-201ENST00000297668 VPS13CQ709C8 3753 aa7.75□□□□□ -1.17
CNTNAP3-201ENST00000297668 NBPF19A0A087WUL8 3843 aa7.74□□□□□ -1.17
CNTNAP3-201ENST00000297668 MT1HL1P0DM35 61 aa7.65□□□□□ -1.18
CNTNAP3-201ENST00000297668 KRTAP3-2Q9BYR7 98 aa7.64□□□□□ -1.19
CNTNAP3-201ENST00000297668 KRTAP3-3Q9BYR6 98 aa7.61□□□□□ -1.19
CNTNAP3-201ENST00000297668 ANK3Q12955 4377 aaKnown RBP7.46□□□□□ -1.21
CNTNAP3-201ENST00000297668 KRTAP10-12P60413 245 aa7.45□□□□□ -1.22
CNTNAP3-201ENST00000297668 KRTAP10-4P60372 401 aaPredicted RBP7.43□□□□□ -1.22
CNTNAP3-201ENST00000297668 TRRAPQ9Y4A5 3859 aa7.42□□□□□ -1.22
CNTNAP3-201ENST00000297668 KRTAP4-5Q9BYR2 181 aa7.3□□□□□ -1.24
CNTNAP3-201ENST00000297668 KRTAP12-3P60328 96 aa7.28□□□□□ -1.24
CNTNAP3-201ENST00000297668 ZNF469Q96JG9 3925 aaPredicted RBP7.28□□□□□ -1.24
CNTNAP3-201ENST00000297668 CRCT1Q9UGL9 99 aa7.26□□□□□ -1.25
CNTNAP3-201ENST00000297668 KRTAP23-1A1A580 65 aa7.23□□□□□ -1.25
CNTNAP3-201ENST00000297668 LCE3AQ5TA76 89 aa7.17□□□□□ -1.26
CNTNAP3-201ENST00000297668 LORP23490 312 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms