RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 RYR3Q15413 4870 aa9.46□□□□□ -0.89
UBAP1-201ENST00000297661 VPS13DQ5THJ4 4388 aa9.45□□□□□ -0.9
UBAP1-201ENST00000297661 IGLV9-49A0A0B4J1Y8 123 aa9.45□□□□□ -0.9
UBAP1-201ENST00000297661 Q6ZRN7 208 aaPredicted RBP9.44□□□□□ -0.9
UBAP1-201ENST00000297661 HRES1P13985 223 aa9.43□□□□□ -0.9
UBAP1-201ENST00000297661 FRAS1Q86XX4 4008 aa9.42□□□□□ -0.9
UBAP1-201ENST00000297661 SPRR1BP22528 89 aa9.42□□□□□ -0.9
UBAP1-201ENST00000297661 TP53AIP1Q9HCN2 124 aa9.41□□□□□ -0.9
UBAP1-201ENST00000297661 RYR2Q92736 4967 aa9.4□□□□□ -0.91
UBAP1-201ENST00000297661 Q6ZR54 194 aa9.39□□□□□ -0.91
UBAP1-201ENST00000297661 ANAPC11Q9NYG5 84 aa9.39□□□□□ -0.91
UBAP1-201ENST00000297661 KRTAP13-1Q8IUC0 172 aa9.39□□□□□ -0.91
UBAP1-201ENST00000297661 HECTD4Q9Y4D8 3996 aa9.38□□□□□ -0.91
UBAP1-201ENST00000297661 ASB16-AS1Q495Z4 193 aa9.38□□□□□ -0.91
UBAP1-201ENST00000297661 DNAH2Q9P225 4427 aa9.37□□□□□ -0.91
UBAP1-201ENST00000297661 ALMS1Q8TCU4 4167 aa9.37□□□□□ -0.91
UBAP1-201ENST00000297661 SPACA4Q8TDM5 124 aa9.36□□□□□ -0.91
UBAP1-201ENST00000297661 DNAH8Q96JB1 4490 aa9.34□□□□□ -0.91
UBAP1-201ENST00000297661 C8orf87E5RJ46 101 aa9.34□□□□□ -0.91
UBAP1-201ENST00000297661 Q96NJ1 140 aa9.34□□□□□ -0.91
UBAP1-201ENST00000297661 C8orf17Q9NRJ1 99 aa9.34□□□□□ -0.91
UBAP1-201ENST00000297661 LINC00313P59037 77 aa9.33□□□□□ -0.92
UBAP1-201ENST00000297661 A0A087WTM6 91 aa9.33□□□□□ -0.92
UBAP1-201ENST00000297661 PRAC1Q96KF2 57 aa9.32□□□□□ -0.92
UBAP1-201ENST00000297661 PRR26Q8N8Z3 221 aa9.32□□□□□ -0.92
UBAP1-201ENST00000297661 PSORS1C2Q9UIG4 136 aa9.3□□□□□ -0.92
UBAP1-201ENST00000297661 IGHV6-1A0A0B4J1U7 121 aa9.3□□□□□ -0.92
UBAP1-201ENST00000297661 RTL8CO15255 209 aa9.29□□□□□ -0.92
UBAP1-201ENST00000297661 DNAH17Q9UFH2 4485 aa9.28□□□□□ -0.92
UBAP1-201ENST00000297661 ADM2Q7Z4H4 148 aa9.25□□□□□ -0.93
UBAP1-201ENST00000297661 MRPL34Q9BQ48 92 aaKnown RBP9.25□□□□□ -0.93
UBAP1-201ENST00000297661 A0A1B0GVX0 72 aa9.25□□□□□ -0.93
UBAP1-201ENST00000297661 C4orf48Q5BLP8 95 aa9.25□□□□□ -0.93
UBAP1-201ENST00000297661 IGLV5-52A0A0A0MRZ9 124 aa9.23□□□□□ -0.93
UBAP1-201ENST00000297661 C1orf134Q5TEV5 83 aa9.22□□□□□ -0.93
UBAP1-201ENST00000297661 DNAH6Q9C0G6 4158 aa9.21□□□□□ -0.93
UBAP1-201ENST00000297661 A0A087X002 238 aa9.21□□□□□ -0.93
UBAP1-201ENST00000297661 LINC00483Q53H64 154 aa9.21□□□□□ -0.93
UBAP1-201ENST00000297661 NOTCH2NLQ7Z3S9 236 aa9.21□□□□□ -0.93
UBAP1-201ENST00000297661 CDK2AP2O75956 126 aa9.2□□□□□ -0.94
UBAP1-201ENST00000297661 FAT2Q9NYQ8 4349 aa9.2□□□□□ -0.94
UBAP1-201ENST00000297661 PLA2G1BP04054 148 aaKnown RBP9.19□□□□□ -0.94
UBAP1-201ENST00000297661 SPINK6Q6UWN8 80 aa9.19□□□□□ -0.94
UBAP1-201ENST00000297661 PKHD1P08F94 4074 aa9.18□□□□□ -0.94
UBAP1-201ENST00000297661 ZNF861PO60384 105 aa9.18□□□□□ -0.94
UBAP1-201ENST00000297661 LINC01554Q52M75 96 aa9.16□□□□□ -0.94
UBAP1-201ENST00000297661 Q5W150 140 aa9.16□□□□□ -0.94
UBAP1-201ENST00000297661 ACYP2P14621 99 aa9.16□□□□□ -0.94
UBAP1-201ENST00000297661 ZNF706Q9Y5V0 76 aaPredicted RBP9.16□□□□□ -0.94
UBAP1-201ENST00000297661 EPPK1P58107 5090 aaKnown RBP9.15□□□□□ -0.94
UBAP1-201ENST00000297661 DNAH11Q96DT5 4516 aa9.13□□□□□ -0.95
UBAP1-201ENST00000297661 CIRBP-AS1Q8TBR5 109 aa9.13□□□□□ -0.95
UBAP1-201ENST00000297661 KRTAP13-3Q3SY46 172 aa9.11□□□□□ -0.95
UBAP1-201ENST00000297661 PKD1P98161 4303 aa9.1□□□□□ -0.95
UBAP1-201ENST00000297661 A0A1B0GU69 56 aa9.1□□□□□ -0.95
UBAP1-201ENST00000297661 SPATA8Q6RVD6 105 aa9.09□□□□□ -0.95
UBAP1-201ENST00000297661 DNAH5Q8TE73 4624 aa9.09□□□□□ -0.95
UBAP1-201ENST00000297661 IGLV7-43P04211 117 aa9.08□□□□□ -0.96
UBAP1-201ENST00000297661 KRTAP10-2P60368 255 aa9.08□□□□□ -0.96
UBAP1-201ENST00000297661 DMAC1Q96GE9 116 aa9.06□□□□□ -0.96
UBAP1-201ENST00000297661 LRP1BQ9NZR2 4599 aa9.03□□□□□ -0.96
UBAP1-201ENST00000297661 H3BS24 57 aa9.03□□□□□ -0.96
UBAP1-201ENST00000297661 MIR22HGQ0VDD5 57 aa9.03□□□□□ -0.96
UBAP1-201ENST00000297661 UQCR11O14957 56 aa9□□□□□ -0.97
UBAP1-201ENST00000297661 RETNLBQ9BQ08 111 aa8.99□□□□□ -0.97
UBAP1-201ENST00000297661 A0A1B0GVY2 172 aa8.98□□□□□ -0.97
UBAP1-201ENST00000297661 CSAG1Q6PB30 78 aa8.96□□□□□ -0.98
UBAP1-201ENST00000297661 DYNC1H1Q14204 4646 aaKnown RBP8.95□□□□□ -0.98
UBAP1-201ENST00000297661 KRTAP10-1P60331 282 aa8.92□□□□□ -0.98
UBAP1-201ENST00000297661 KRTAP13-2Q52LG2 175 aa8.91□□□□□ -0.98
UBAP1-201ENST00000297661 KIAA1109Q2LD37 5005 aa8.91□□□□□ -0.98
UBAP1-201ENST00000297661 SSBP3-AS1Q7Z2R9 100 aa8.89□□□□□ -0.99
UBAP1-201ENST00000297661 FAM229AH3BQW9 127 aa8.88□□□□□ -0.99
UBAP1-201ENST00000297661 VPS13BQ7Z7G8 4022 aa8.88□□□□□ -0.99
UBAP1-201ENST00000297661 IGKV2-30P06310 120 aa8.87□□□□□ -0.99
UBAP1-201ENST00000297661 APOBP04114 4563 aaKnown RBP8.82□□□□□ -1
UBAP1-201ENST00000297661 SMR3BP02814 79 aaPredicted RBP8.8□□□□□ -1
UBAP1-201ENST00000297661 FAT1Q14517 4588 aa8.79□□□□□ -1
UBAP1-201ENST00000297661 Q6ZSA8 131 aa8.78□□□□□ -1
UBAP1-201ENST00000297661 BIRC6Q9NR09 4857 aa8.78□□□□□ -1
UBAP1-201ENST00000297661 KRTAP1-4P0C5Y4 121 aa8.77□□□□□ -1.01
UBAP1-201ENST00000297661 HSPG2P98160 4391 aa8.76□□□□□ -1.01
UBAP1-201ENST00000297661 IGKV2D-30A0A075B6S6 120 aa8.76□□□□□ -1.01
UBAP1-201ENST00000297661 KRTAP17-1Q9BYP8 105 aa8.75□□□□□ -1.01
UBAP1-201ENST00000297661 RYR1P21817 5038 aa8.74□□□□□ -1.01
UBAP1-201ENST00000297661 KRTAP16-1A8MUX0 517 aa8.72□□□□□ -1.01
UBAP1-201ENST00000297661 SPINK1P00995 79 aa8.7□□□□□ -1.02
UBAP1-201ENST00000297661 TYMSOSQ8TAI1 123 aa8.68□□□□□ -1.02
UBAP1-201ENST00000297661 FLG2Q5D862 2391 aaPredicted RBP8.64□□□□□ -1.03
UBAP1-201ENST00000297661 A8MUU9 505 aa8.63□□□□□ -1.03
UBAP1-201ENST00000297661 KRTAP25-1Q3LHN0 102 aa8.63□□□□□ -1.03
UBAP1-201ENST00000297661 KRTAP4-5Q9BYR2 181 aa8.63□□□□□ -1.03
UBAP1-201ENST00000297661 H0YAA0 97 aa8.61□□□□□ -1.03
UBAP1-201ENST00000297661 Q8N1X5 172 aa8.6□□□□□ -1.03
UBAP1-201ENST00000297661 LINC00304Q8N9R0 145 aa8.59□□□□□ -1.03
UBAP1-201ENST00000297661 ROMO1P60602 79 aa8.59□□□□□ -1.03
UBAP1-201ENST00000297661 Q5VSD8 79 aa8.57□□□□□ -1.04
UBAP1-201ENST00000297661 HERC2O95714 4834 aa8.56□□□□□ -1.04
UBAP1-201ENST00000297661 ABCA13Q86UQ4 5058 aa8.55□□□□□ -1.04
UBAP1-201ENST00000297661 MYCBP2O75592 4640 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms