RNA–Protein interactions for RNA: ENST00000296181.8

ITGB5-201, Transcript of integrin subunit beta 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB5, Length 4,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-201ENST00000296181 PANO1I0J062 215 aa11.16□□□□□ -0.62
ITGB5-201ENST00000296181 C9orf92A6NGG3 77 aa11.15□□□□□ -0.62
ITGB5-201ENST00000296181 A8MU10 97 aa11.14□□□□□ -0.63
ITGB5-201ENST00000296181 KRTAP11-1Q8IUC1 163 aa11.13□□□□□ -0.63
ITGB5-201ENST00000296181 NBPF19A0A087WUL8 3843 aa11.12□□□□□ -0.63
ITGB5-201ENST00000296181 WWC2-AS2Q96NR7 200 aa11.11□□□□□ -0.63
ITGB5-201ENST00000296181 BSNQ9UPA5 3926 aa11.09□□□□□ -0.63
ITGB5-201ENST00000296181 LCE6AA0A183 80 aa11.08□□□□□ -0.64
ITGB5-201ENST00000296181 SMR3BP02814 79 aaPredicted RBP11.08□□□□□ -0.64
ITGB5-201ENST00000296181 ZFHX3Q15911 3703 aa11.06□□□□□ -0.64
ITGB5-201ENST00000296181 LINC00304Q8N9R0 145 aa11.06□□□□□ -0.64
ITGB5-201ENST00000296181 A0A087X002 238 aa11.05□□□□□ -0.64
ITGB5-201ENST00000296181 NOTCH2NLQ7Z3S9 236 aa11.05□□□□□ -0.64
ITGB5-201ENST00000296181 FLG2Q5D862 2391 aaPredicted RBP11.04□□□□□ -0.64
ITGB5-201ENST00000296181 Q5W150 140 aa11.04□□□□□ -0.64
ITGB5-201ENST00000296181 PLAC8Q9NZF1 115 aa10.99□□□□□ -0.65
ITGB5-201ENST00000296181 PKD1L1Q8TDX9 2849 aa10.97□□□□□ -0.65
ITGB5-201ENST00000296181 Q6ZR54 194 aa10.97□□□□□ -0.65
ITGB5-201ENST00000296181 SPINT4Q6UDR6 99 aa10.95□□□□□ -0.66
ITGB5-201ENST00000296181 LINC01554Q52M75 96 aa10.93□□□□□ -0.66
ITGB5-201ENST00000296181 A0A0D9SG42 100 aa10.89□□□□□ -0.67
ITGB5-201ENST00000296181 TENM2Q9NT68 2774 aa10.86□□□□□ -0.67
ITGB5-201ENST00000296181 LINC00483Q53H64 154 aa10.86□□□□□ -0.67
ITGB5-201ENST00000296181 CSAG1Q6PB30 78 aa10.86□□□□□ -0.67
ITGB5-201ENST00000296181 A0A1B0GU33 70 aa10.84□□□□□ -0.67
ITGB5-201ENST00000296181 DMAC1Q96GE9 116 aa10.84□□□□□ -0.67
ITGB5-201ENST00000296181 TGP01266 2768 aa10.78□□□□□ -0.68
ITGB5-201ENST00000296181 A6NN06 94 aa10.78□□□□□ -0.68
ITGB5-201ENST00000296181 CRIPTQ9P021 101 aa10.77□□□□□ -0.69
ITGB5-201ENST00000296181 KRTAP10-2P60368 255 aa10.74□□□□□ -0.69
ITGB5-201ENST00000296181 VPS13CQ709C8 3753 aa10.73□□□□□ -0.69
ITGB5-201ENST00000296181 ADM2Q7Z4H4 148 aa10.7□□□□□ -0.7
ITGB5-201ENST00000296181 KRTAP13-1Q8IUC0 172 aa10.7□□□□□ -0.7
ITGB5-201ENST00000296181 Q6ZRN7 208 aaPredicted RBP10.68□□□□□ -0.7
ITGB5-201ENST00000296181 TRRAPQ9Y4A5 3859 aa10.67□□□□□ -0.7
ITGB5-201ENST00000296181 H3BS24 57 aa10.65□□□□□ -0.7
ITGB5-201ENST00000296181 KRTAP10-1P60331 282 aa10.65□□□□□ -0.7
ITGB5-201ENST00000296181 SPATA8Q6RVD6 105 aa10.61□□□□□ -0.71
ITGB5-201ENST00000296181 SRRM2Q9UQ35 2752 aaKnown RBP10.53□□□□□ -0.72
ITGB5-201ENST00000296181 KRTAP13-2Q52LG2 175 aa10.48□□□□□ -0.73
ITGB5-201ENST00000296181 ASB16-AS1Q495Z4 193 aa10.44□□□□□ -0.74
ITGB5-201ENST00000296181 H1FX-AS1Q4G0G2 97 aa10.42□□□□□ -0.74
ITGB5-201ENST00000296181 ANK3Q12955 4377 aaKnown RBP10.39□□□□□ -0.75
ITGB5-201ENST00000296181 ZNF469Q96JG9 3925 aaPredicted RBP10.36□□□□□ -0.75
ITGB5-201ENST00000296181 RPL37P61927 97 aaKnown RBP10.34□□□□□ -0.75
ITGB5-201ENST00000296181 FBN3Q75N90 2809 aa10.3□□□□□ -0.76
ITGB5-201ENST00000296181 S4R3F8 94 aa10.28□□□□□ -0.76
ITGB5-201ENST00000296181 ROMO1P60602 79 aa10.28□□□□□ -0.76
ITGB5-201ENST00000296181 COX6B2Q6YFQ2 88 aa10.28□□□□□ -0.76
ITGB5-201ENST00000296181 Q6ZSA8 131 aa10.24□□□□□ -0.77
ITGB5-201ENST00000296181 KRTAP25-1Q3LHN0 102 aa10.21□□□□□ -0.77
ITGB5-201ENST00000296181 J3QL48 77 aa10.21□□□□□ -0.78
ITGB5-201ENST00000296181 Q5VSD8 79 aa10.09□□□□□ -0.79
ITGB5-201ENST00000296181 KRTAP1-4P0C5Y4 121 aa10.06□□□□□ -0.8
ITGB5-201ENST00000296181 CAMK2N1Q7Z7J9 78 aa10.05□□□□□ -0.8
ITGB5-201ENST00000296181 COL7A1Q02388 2944 aa10.05□□□□□ -0.8
ITGB5-201ENST00000296181 R4GN34 69 aa10.05□□□□□ -0.8
ITGB5-201ENST00000296181 MEGF8Q7Z7M0 2845 aa10.04□□□□□ -0.8
ITGB5-201ENST00000296181 KRTAP13-3Q3SY46 172 aa10.02□□□□□ -0.81
ITGB5-201ENST00000296181 LUZP6Q538Z0 58 aa10.02□□□□□ -0.81
ITGB5-201ENST00000296181 KRTAP16-1A8MUX0 517 aa10.01□□□□□ -0.81
ITGB5-201ENST00000296181 H0YAA0 97 aa9.99□□□□□ -0.81
ITGB5-201ENST00000296181 RPS29P62273 56 aaKnown RBP9.99□□□□□ -0.81
ITGB5-201ENST00000296181 CSMD3Q7Z407 3707 aa9.98□□□□□ -0.81
ITGB5-201ENST00000296181 A8MUU9 505 aa9.97□□□□□ -0.81
ITGB5-201ENST00000296181 M0QZ58 72 aa9.96□□□□□ -0.82
ITGB5-201ENST00000296181 C20orf166-AS1Q96NR2 134 aa9.91□□□□□ -0.82
ITGB5-201ENST00000296181 AKAP9Q99996 3911 aa9.85□□□□□ -0.83
ITGB5-201ENST00000296181 NDUFAF8A1L188 74 aa9.85□□□□□ -0.83
ITGB5-201ENST00000296181 C10orf95Q9H7T3 257 aa9.82□□□□□ -0.84
ITGB5-201ENST00000296181 SEC61BP60468 96 aaKnown RBP9.66□□□□□ -0.86
ITGB5-201ENST00000296181 A0A0A0MQY5 61 aa9.59□□□□□ -0.87
ITGB5-201ENST00000296181 P0C880 135 aa9.58□□□□□ -0.88
ITGB5-201ENST00000296181 HUWE1Q7Z6Z7 4374 aaKnown RBP9.56□□□□□ -0.88
ITGB5-201ENST00000296181 M0R2T5 61 aa9.54□□□□□ -0.88
ITGB5-201ENST00000296181 XP32Q5T750 250 aa9.54□□□□□ -0.88
ITGB5-201ENST00000296181 KRTAP21-3Q3LHN1 58 aa9.53□□□□□ -0.88
ITGB5-201ENST00000296181 KRTAP3-1Q9BYR8 98 aa9.49□□□□□ -0.89
ITGB5-201ENST00000296181 A0A1B0GVY2 172 aa9.29□□□□□ -0.92
ITGB5-201ENST00000296181 PLAC4Q8WY50 150 aa9.28□□□□□ -0.92
ITGB5-201ENST00000296181 TPRXLQ17RH7 258 aa9.27□□□□□ -0.92
ITGB5-201ENST00000296181 KRTAP12-2P59991 146 aa9.27□□□□□ -0.93
ITGB5-201ENST00000296181 DNAH10Q8IVF4 4471 aa9.27□□□□□ -0.93
ITGB5-201ENST00000296181 DNAH9Q9NYC9 4486 aa9.24□□□□□ -0.93
ITGB5-201ENST00000296181 KRTAP10-8P60410 259 aa9.23□□□□□ -0.93
ITGB5-201ENST00000296181 KRTAP13-4Q3LI77 160 aa9.22□□□□□ -0.93
ITGB5-201ENST00000296181 PLECQ15149 4684 aaKnown RBP9.22□□□□□ -0.93
ITGB5-201ENST00000296181 KRTAP10-6P60371 365 aaPredicted RBP9.16□□□□□ -0.94
ITGB5-201ENST00000296181 TNP1P09430 55 aa9.12□□□□□ -0.95
ITGB5-201ENST00000296181 DNHD1Q96M86 4753 aa9.12□□□□□ -0.95
ITGB5-201ENST00000296181 KRTAP12-1P59990 96 aa9.12□□□□□ -0.95
ITGB5-201ENST00000296181 DNAH11Q96DT5 4516 aa9.09□□□□□ -0.95
ITGB5-201ENST00000296181 DNAH1Q9P2D7 4330 aa9.04□□□□□ -0.96
ITGB5-201ENST00000296181 PP632Q6XCG6 107 aa9□□□□□ -0.97
ITGB5-201ENST00000296181 ANK2Q01484 3957 aa8.95□□□□□ -0.98
ITGB5-201ENST00000296181 STARD9Q9P2P6 4700 aa8.94□□□□□ -0.98
ITGB5-201ENST00000296181 KRTAP3-3Q9BYR6 98 aa8.92□□□□□ -0.98
ITGB5-201ENST00000296181 KRTAP3-2Q9BYR7 98 aa8.91□□□□□ -0.98
ITGB5-201ENST00000296181 DNAH5Q8TE73 4624 aa8.91□□□□□ -0.98
ITGB5-201ENST00000296181 PRKDCP78527 4128 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms