RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 ROMO1P60602 79 aa10.17□□□□□ -0.78
CDC42EP3-201ENST00000295324 RPL37P61927 97 aaKnown RBP10.15□□□□□ -0.78
CDC42EP3-201ENST00000295324 ZANQ9Y493 2812 aa10.15□□□□□ -0.78
CDC42EP3-201ENST00000295324 KRTAP29-1A8MX34 341 aaPredicted RBP10.14□□□□□ -0.79
CDC42EP3-201ENST00000295324 KRTAP13-1Q8IUC0 172 aa10.14□□□□□ -0.79
CDC42EP3-201ENST00000295324 KRTAP13-2Q52LG2 175 aa10.13□□□□□ -0.79
CDC42EP3-201ENST00000295324 DCHS2Q6V1P9 2916 aa10.1□□□□□ -0.79
CDC42EP3-201ENST00000295324 ASH1LQ9NR48 2969 aaKnown RBP10.1□□□□□ -0.79
CDC42EP3-201ENST00000295324 DMXL1Q9Y485 3027 aa10.09□□□□□ -0.79
CDC42EP3-201ENST00000295324 FREM2Q5SZK8 3169 aa10.09□□□□□ -0.79
CDC42EP3-201ENST00000295324 M0QZ58 72 aa10.09□□□□□ -0.79
CDC42EP3-201ENST00000295324 H1FX-AS1Q4G0G2 97 aa10.07□□□□□ -0.8
CDC42EP3-201ENST00000295324 NOTCH2NLQ7Z3S9 236 aa10.06□□□□□ -0.8
CDC42EP3-201ENST00000295324 PLAC4Q8WY50 150 aa10□□□□□ -0.81
CDC42EP3-201ENST00000295324 ADM2Q7Z4H4 148 aa9.98□□□□□ -0.81
CDC42EP3-201ENST00000295324 DNAH14Q0VDD8 3507 aa9.95□□□□□ -0.82
CDC42EP3-201ENST00000295324 NF1P21359 2839 aa9.95□□□□□ -0.82
CDC42EP3-201ENST00000295324 SPATA8Q6RVD6 105 aa9.92□□□□□ -0.82
CDC42EP3-201ENST00000295324 CFAP47Q6ZTR5 3102 aa9.91□□□□□ -0.82
CDC42EP3-201ENST00000295324 USP34Q70CQ2 3546 aa9.91□□□□□ -0.82
CDC42EP3-201ENST00000295324 HRNRQ86YZ3 2850 aaPredicted RBP9.9□□□□□ -0.82
CDC42EP3-201ENST00000295324 KRTAP16-1A8MUX0 517 aa9.89□□□□□ -0.83
CDC42EP3-201ENST00000295324 TENM3Q9P273 2699 aa9.86□□□□□ -0.83
CDC42EP3-201ENST00000295324 SPTBN5Q9NRC6 3674 aaKnown RBP9.84□□□□□ -0.83
CDC42EP3-201ENST00000295324 C20orf166-AS1Q96NR2 134 aa9.82□□□□□ -0.84
CDC42EP3-201ENST00000295324 TENM1Q9UKZ4 2725 aa9.82□□□□□ -0.84
CDC42EP3-201ENST00000295324 MXRA5Q9NR99 2828 aa9.79□□□□□ -0.84
CDC42EP3-201ENST00000295324 FBN2P35556 2912 aa9.78□□□□□ -0.84
CDC42EP3-201ENST00000295324 A8MUU9 505 aa9.75□□□□□ -0.85
CDC42EP3-201ENST00000295324 KRTAP1-4P0C5Y4 121 aa9.75□□□□□ -0.85
CDC42EP3-201ENST00000295324 A6NN06 94 aa9.74□□□□□ -0.85
CDC42EP3-201ENST00000295324 KRTAP25-1Q3LHN0 102 aa9.73□□□□□ -0.85
CDC42EP3-201ENST00000295324 TENM2Q9NT68 2774 aa9.73□□□□□ -0.85
CDC42EP3-201ENST00000295324 SPEGQ15772 3267 aa9.72□□□□□ -0.85
CDC42EP3-201ENST00000295324 LOC400499M0QZD8 3231 aa9.66□□□□□ -0.86
CDC42EP3-201ENST00000295324 A8MU10 97 aa9.63□□□□□ -0.87
CDC42EP3-201ENST00000295324 XP32Q5T750 250 aa9.61□□□□□ -0.87
CDC42EP3-201ENST00000295324 TPRXLQ17RH7 258 aa9.57□□□□□ -0.88
CDC42EP3-201ENST00000295324 NDUFAF8A1L188 74 aa9.56□□□□□ -0.88
CDC42EP3-201ENST00000295324 PKD1L1Q8TDX9 2849 aa9.54□□□□□ -0.88
CDC42EP3-201ENST00000295324 CELSR1Q9NYQ6 3014 aa9.52□□□□□ -0.88
CDC42EP3-201ENST00000295324 A0A1B0GVY2 172 aa9.48□□□□□ -0.89
CDC42EP3-201ENST00000295324 PDZD2O15018 2839 aa9.47□□□□□ -0.89
CDC42EP3-201ENST00000295324 DCHS1Q96JQ0 3298 aa9.43□□□□□ -0.9
CDC42EP3-201ENST00000295324 MYO15AQ9UKN7 3530 aa9.39□□□□□ -0.91
CDC42EP3-201ENST00000295324 KRTAP13-3Q3SY46 172 aa9.36□□□□□ -0.91
CDC42EP3-201ENST00000295324 KRTAP10-8P60410 259 aa9.34□□□□□ -0.91
CDC42EP3-201ENST00000295324 TNP1P09430 55 aa9.32□□□□□ -0.92
CDC42EP3-201ENST00000295324 C10orf95Q9H7T3 257 aa9.32□□□□□ -0.92
CDC42EP3-201ENST00000295324 TGP01266 2768 aa9.31□□□□□ -0.92
CDC42EP3-201ENST00000295324 VWFP04275 2813 aa9.29□□□□□ -0.92
CDC42EP3-201ENST00000295324 OTOGQ6ZRI0 2925 aa9.29□□□□□ -0.92
CDC42EP3-201ENST00000295324 RELNP78509 3460 aa9.27□□□□□ -0.93
CDC42EP3-201ENST00000295324 KRTAP10-10P60014 251 aa9.22□□□□□ -0.93
CDC42EP3-201ENST00000295324 FBN1P35555 2871 aaKnown RBP9.16□□□□□ -0.94
CDC42EP3-201ENST00000295324 PP632Q6XCG6 107 aa9.1□□□□□ -0.95
CDC42EP3-201ENST00000295324 WDFY3Q8IZQ1 3526 aa9.09□□□□□ -0.95
CDC42EP3-201ENST00000295324 NBPF19A0A087WUL8 3843 aa9.03□□□□□ -0.96
CDC42EP3-201ENST00000295324 PRO2289Q9P1D8 64 aa9.02□□□□□ -0.97
CDC42EP3-201ENST00000295324 ZFHX3Q15911 3703 aa8.98□□□□□ -0.97
CDC42EP3-201ENST00000295324 SRRM2Q9UQ35 2752 aaKnown RBP8.96□□□□□ -0.98
CDC42EP3-201ENST00000295324 LAMA5O15230 3695 aa8.95□□□□□ -0.98
CDC42EP3-201ENST00000295324 P0C880 135 aa8.94□□□□□ -0.98
CDC42EP3-201ENST00000295324 H0YAA0 97 aa8.92□□□□□ -0.98
CDC42EP3-201ENST00000295324 ASPMQ8IZT6 3477 aa8.81□□□□□ -1
CDC42EP3-201ENST00000295324 MUC3AQ02505 3323 aa8.8□□□□□ -1
CDC42EP3-201ENST00000295324 ANK3Q12955 4377 aaKnown RBP8.78□□□□□ -1
CDC42EP3-201ENST00000295324 FBN3Q75N90 2809 aa8.69□□□□□ -1.02
CDC42EP3-201ENST00000295324 ZFHX4Q86UP3 3567 aa8.65□□□□□ -1.02
CDC42EP3-201ENST00000295324 DMDP11532 3685 aa8.64□□□□□ -1.03
CDC42EP3-201ENST00000295324 MT1HL1P0DM35 61 aa8.61□□□□□ -1.03
CDC42EP3-201ENST00000295324 MEGF8Q7Z7M0 2845 aa8.57□□□□□ -1.04
CDC42EP3-201ENST00000295324 SMG1Q96Q15 3661 aaKnown RBP8.57□□□□□ -1.04
CDC42EP3-201ENST00000295324 COL7A1Q02388 2944 aa8.52□□□□□ -1.04
CDC42EP3-201ENST00000295324 CSMD2Q7Z408 3487 aa8.51□□□□□ -1.05
CDC42EP3-201ENST00000295324 CSMD1Q96PZ7 3565 aa8.49□□□□□ -1.05
CDC42EP3-201ENST00000295324 KRTAP3-1Q9BYR8 98 aa8.47□□□□□ -1.05
CDC42EP3-201ENST00000295324 TRRAPQ9Y4A5 3859 aa8.45□□□□□ -1.06
CDC42EP3-201ENST00000295324 KRTAP4-5Q9BYR2 181 aa8.41□□□□□ -1.06
CDC42EP3-201ENST00000295324 KRTAP10-4P60372 401 aaPredicted RBP8.4□□□□□ -1.07
CDC42EP3-201ENST00000295324 KRTAP12-2P59991 146 aa8.39□□□□□ -1.07
CDC42EP3-201ENST00000295324 KRTAP13-4Q3LI77 160 aa8.34□□□□□ -1.07
CDC42EP3-201ENST00000295324 KRTAP12-1P59990 96 aa8.32□□□□□ -1.08
CDC42EP3-201ENST00000295324 SPENQ96T58 3664 aaKnown RBP8.26□□□□□ -1.09
CDC42EP3-201ENST00000295324 HUWE1Q7Z6Z7 4374 aaKnown RBP8.2□□□□□ -1.1
CDC42EP3-201ENST00000295324 SVEP1Q4LDE5 3571 aa8.2□□□□□ -1.1
CDC42EP3-201ENST00000295324 KRTAP10-6P60371 365 aaPredicted RBP8.16□□□□□ -1.1
CDC42EP3-201ENST00000295324 BSNQ9UPA5 3926 aa8.09□□□□□ -1.11
CDC42EP3-201ENST00000295324 ALMS1Q8TCU4 4167 aa8.06□□□□□ -1.12
CDC42EP3-201ENST00000295324 CUBNO60494 3623 aa8.04□□□□□ -1.12
CDC42EP3-201ENST00000295324 KRTAP15-1Q3LI76 137 aa8.02□□□□□ -1.13
CDC42EP3-201ENST00000295324 KRTAP3-3Q9BYR6 98 aa7.96□□□□□ -1.14
CDC42EP3-201ENST00000295324 DNAH9Q9NYC9 4486 aa7.9□□□□□ -1.14
CDC42EP3-201ENST00000295324 KRTAP3-2Q9BYR7 98 aa7.89□□□□□ -1.15
CDC42EP3-201ENST00000295324 DNAH5Q8TE73 4624 aa7.85□□□□□ -1.15
CDC42EP3-201ENST00000295324 INE1O15225 51 aa7.83□□□□□ -1.16
CDC42EP3-201ENST00000295324 DNHD1Q96M86 4753 aa7.82□□□□□ -1.16
CDC42EP3-201ENST00000295324 KRTAP10-12P60413 245 aa7.82□□□□□ -1.16
CDC42EP3-201ENST00000295324 PLECQ15149 4684 aaKnown RBP7.73□□□□□ -1.17
CDC42EP3-201ENST00000295324 DNAH11Q96DT5 4516 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms