RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 ASB16-AS1Q495Z4 193 aa10.83□□□□□ -0.68
LSM11-201ENST00000286307 SPEGQ15772 3267 aa10.82□□□□□ -0.68
LSM11-201ENST00000286307 SPATA8Q6RVD6 105 aa10.81□□□□□ -0.68
LSM11-201ENST00000286307 ADGRG4Q8IZF6 3080 aa10.78□□□□□ -0.68
LSM11-201ENST00000286307 A8MUU9 505 aa10.77□□□□□ -0.69
LSM11-201ENST00000286307 APCP25054 2843 aa10.76□□□□□ -0.69
LSM11-201ENST00000286307 KRTAP13-1Q8IUC0 172 aa10.76□□□□□ -0.69
LSM11-201ENST00000286307 NBEAQ8NFP9 2946 aa10.76□□□□□ -0.69
LSM11-201ENST00000286307 DMXL1Q9Y485 3027 aa10.74□□□□□ -0.69
LSM11-201ENST00000286307 KRTAP29-1A8MX34 341 aaPredicted RBP10.73□□□□□ -0.69
LSM11-201ENST00000286307 CYSTM1Q9H1C7 97 aa10.7□□□□□ -0.7
LSM11-201ENST00000286307 ROMO1P60602 79 aa10.66□□□□□ -0.7
LSM11-201ENST00000286307 Q5XG85 94 aa10.65□□□□□ -0.7
LSM11-201ENST00000286307 Q5VV11 94 aa10.63□□□□□ -0.71
LSM11-201ENST00000286307 ZZEF1O43149 2961 aa10.63□□□□□ -0.71
LSM11-201ENST00000286307 A0A1B0GVY2 172 aa10.6□□□□□ -0.71
LSM11-201ENST00000286307 PRAC1Q96KF2 57 aa10.58□□□□□ -0.72
LSM11-201ENST00000286307 ASH1LQ9NR48 2969 aaKnown RBP10.53□□□□□ -0.72
LSM11-201ENST00000286307 XP32Q5T750 250 aa10.49□□□□□ -0.73
LSM11-201ENST00000286307 CELSR2Q9HCU4 2923 aa10.49□□□□□ -0.73
LSM11-201ENST00000286307 KRTAP1-4P0C5Y4 121 aa10.45□□□□□ -0.74
LSM11-201ENST00000286307 A8MU10 97 aa10.42□□□□□ -0.74
LSM11-201ENST00000286307 DCHS2Q6V1P9 2916 aa10.4□□□□□ -0.75
LSM11-201ENST00000286307 TPRXLQ17RH7 258 aa10.36□□□□□ -0.75
LSM11-201ENST00000286307 LOC400499M0QZD8 3231 aa10.34□□□□□ -0.75
LSM11-201ENST00000286307 NIPBLQ6KC79 2804 aaeCLIP10.33□□□□□ -0.76
LSM11-201ENST00000286307 KRTAP10-10P60014 251 aa10.33□□□□□ -0.76
LSM11-201ENST00000286307 MYO15AQ9UKN7 3530 aa10.32□□□□□ -0.76
LSM11-201ENST00000286307 KRTAP10-8P60410 259 aa10.3□□□□□ -0.76
LSM11-201ENST00000286307 ZANQ9Y493 2812 aa10.29□□□□□ -0.76
LSM11-201ENST00000286307 TENM2Q9NT68 2774 aa10.28□□□□□ -0.76
LSM11-201ENST00000286307 NBPF19A0A087WUL8 3843 aa10.25□□□□□ -0.77
LSM11-201ENST00000286307 TNP1P09430 55 aa10.25□□□□□ -0.77
LSM11-201ENST00000286307 NF1P21359 2839 aa10.24□□□□□ -0.77
LSM11-201ENST00000286307 HRNRQ86YZ3 2850 aaPredicted RBP10.24□□□□□ -0.77
LSM11-201ENST00000286307 TENM1Q9UKZ4 2725 aa10.2□□□□□ -0.78
LSM11-201ENST00000286307 A0A0A0MQY5 61 aa10.19□□□□□ -0.78
LSM11-201ENST00000286307 ASPMQ8IZT6 3477 aa10.16□□□□□ -0.78
LSM11-201ENST00000286307 KRTAP13-3Q3SY46 172 aa10.13□□□□□ -0.79
LSM11-201ENST00000286307 RELNP78509 3460 aa10.12□□□□□ -0.79
LSM11-201ENST00000286307 FBN2P35556 2912 aa10.09□□□□□ -0.79
LSM11-201ENST00000286307 CELSR1Q9NYQ6 3014 aa10.08□□□□□ -0.8
LSM11-201ENST00000286307 WDFY3Q8IZQ1 3526 aa10.05□□□□□ -0.8
LSM11-201ENST00000286307 TENM3Q9P273 2699 aa9.99□□□□□ -0.81
LSM11-201ENST00000286307 PRO2289Q9P1D8 64 aa9.98□□□□□ -0.81
LSM11-201ENST00000286307 DCHS1Q96JQ0 3298 aa9.96□□□□□ -0.81
LSM11-201ENST00000286307 MXRA5Q9NR99 2828 aa9.91□□□□□ -0.82
LSM11-201ENST00000286307 PKD1L1Q8TDX9 2849 aa9.9□□□□□ -0.83
LSM11-201ENST00000286307 LAMA5O15230 3695 aa9.9□□□□□ -0.83
LSM11-201ENST00000286307 C10orf95Q9H7T3 257 aa9.88□□□□□ -0.83
LSM11-201ENST00000286307 KRTAP16-1A8MUX0 517 aa9.86□□□□□ -0.83
LSM11-201ENST00000286307 KRTAP25-1Q3LHN0 102 aa9.86□□□□□ -0.83
LSM11-201ENST00000286307 PDZD2O15018 2839 aa9.81□□□□□ -0.84
LSM11-201ENST00000286307 ZFHX3Q15911 3703 aa9.79□□□□□ -0.84
LSM11-201ENST00000286307 ZFHX4Q86UP3 3567 aa9.72□□□□□ -0.85
LSM11-201ENST00000286307 VWFP04275 2813 aa9.71□□□□□ -0.85
LSM11-201ENST00000286307 DMDP11532 3685 aa9.7□□□□□ -0.86
LSM11-201ENST00000286307 P0C880 135 aa9.66□□□□□ -0.86
LSM11-201ENST00000286307 A6NN06 94 aa9.64□□□□□ -0.87
LSM11-201ENST00000286307 ANK3Q12955 4377 aaKnown RBP9.62□□□□□ -0.87
LSM11-201ENST00000286307 PP632Q6XCG6 107 aa9.61□□□□□ -0.87
LSM11-201ENST00000286307 H3BS24 57 aa9.59□□□□□ -0.87
LSM11-201ENST00000286307 OTOGQ6ZRI0 2925 aa9.57□□□□□ -0.88
LSM11-201ENST00000286307 H0YAA0 97 aa9.54□□□□□ -0.88
LSM11-201ENST00000286307 TGP01266 2768 aa9.47□□□□□ -0.89
LSM11-201ENST00000286307 FBN1P35555 2871 aaKnown RBP9.47□□□□□ -0.89
LSM11-201ENST00000286307 MUC3AQ02505 3323 aa9.46□□□□□ -0.89
LSM11-201ENST00000286307 CSMD1Q96PZ7 3565 aa9.45□□□□□ -0.9
LSM11-201ENST00000286307 NDUFAF8A1L188 74 aa9.42□□□□□ -0.9
LSM11-201ENST00000286307 CSMD2Q7Z408 3487 aa9.39□□□□□ -0.91
LSM11-201ENST00000286307 SMG1Q96Q15 3661 aaKnown RBP9.38□□□□□ -0.91
LSM11-201ENST00000286307 KRTAP4-5Q9BYR2 181 aa9.34□□□□□ -0.91
LSM11-201ENST00000286307 MT1HL1P0DM35 61 aa9.24□□□□□ -0.93
LSM11-201ENST00000286307 SPENQ96T58 3664 aaKnown RBP9.22□□□□□ -0.93
LSM11-201ENST00000286307 TRRAPQ9Y4A5 3859 aa9.19□□□□□ -0.94
LSM11-201ENST00000286307 KRTAP12-2P59991 146 aa9.18□□□□□ -0.94
LSM11-201ENST00000286307 SVEP1Q4LDE5 3571 aa9.15□□□□□ -0.94
LSM11-201ENST00000286307 HUWE1Q7Z6Z7 4374 aaKnown RBP9.09□□□□□ -0.95
LSM11-201ENST00000286307 BSNQ9UPA5 3926 aa9.09□□□□□ -0.96
LSM11-201ENST00000286307 SRRM2Q9UQ35 2752 aaKnown RBP9.06□□□□□ -0.96
LSM11-201ENST00000286307 KRTAP3-1Q9BYR8 98 aa9.03□□□□□ -0.96
LSM11-201ENST00000286307 KRTAP13-4Q3LI77 160 aa9.01□□□□□ -0.97
LSM11-201ENST00000286307 ALMS1Q8TCU4 4167 aa9□□□□□ -0.97
LSM11-201ENST00000286307 FBN3Q75N90 2809 aa8.96□□□□□ -0.98
LSM11-201ENST00000286307 KRTAP12-1P59990 96 aa8.95□□□□□ -0.98
LSM11-201ENST00000286307 COL7A1Q02388 2944 aa8.9□□□□□ -0.98
LSM11-201ENST00000286307 CUBNO60494 3623 aa8.9□□□□□ -0.99
LSM11-201ENST00000286307 KRTAP15-1Q3LI76 137 aa8.87□□□□□ -0.99
LSM11-201ENST00000286307 KRTAP10-4P60372 401 aaPredicted RBP8.85□□□□□ -0.99
LSM11-201ENST00000286307 MEGF8Q7Z7M0 2845 aa8.82□□□□□ -1
LSM11-201ENST00000286307 CRCT1Q9UGL9 99 aa8.75□□□□□ -1.01
LSM11-201ENST00000286307 VPS13CQ709C8 3753 aa8.71□□□□□ -1.01
LSM11-201ENST00000286307 KRTAP10-6P60371 365 aaPredicted RBP8.64□□□□□ -1.03
LSM11-201ENST00000286307 KRTAP10-12P60413 245 aa8.61□□□□□ -1.03
LSM11-201ENST00000286307 AKAP9Q99996 3911 aa8.61□□□□□ -1.03
LSM11-201ENST00000286307 DNAH9Q9NYC9 4486 aa8.58□□□□□ -1.04
LSM11-201ENST00000286307 KRTAP3-3Q9BYR6 98 aa8.45□□□□□ -1.06
LSM11-201ENST00000286307 ZNF469Q96JG9 3925 aaPredicted RBP8.45□□□□□ -1.06
LSM11-201ENST00000286307 LORP23490 312 aaPredicted RBP8.4□□□□□ -1.06
LSM11-201ENST00000286307 CSMD3Q7Z407 3707 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms