RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 Q96NJ1 140 aa6.99□□□□□ -1.29
SLC13A3-201ENST00000279027 SPINK1P00995 79 aa6.98□□□□□ -1.29
SLC13A3-201ENST00000279027 CD164Q04900 197 aa6.98□□□□□ -1.29
SLC13A3-201ENST00000279027 V9GYY9 64 aa6.98□□□□□ -1.29
SLC13A3-201ENST00000279027 Q8N9P0 234 aaPredicted RBP6.96□□□□□ -1.29
SLC13A3-201ENST00000279027 DMBT1Q9UGM3 2413 aaPredicted RBP6.96□□□□□ -1.3
SLC13A3-201ENST00000279027 DNAH3Q8TD57 4116 aa6.95□□□□□ -1.3
SLC13A3-201ENST00000279027 LCE6AA0A183 80 aa6.95□□□□□ -1.3
SLC13A3-201ENST00000279027 PRR26Q8N8Z3 221 aa6.95□□□□□ -1.3
SLC13A3-201ENST00000279027 PRKDCP78527 4128 aaKnown RBP6.95□□□□□ -1.3
SLC13A3-201ENST00000279027 CYP4F30PQ9H0H9 118 aa6.95□□□□□ -1.3
SLC13A3-201ENST00000279027 LIMD2Q9BT23 127 aa6.94□□□□□ -1.3
SLC13A3-201ENST00000279027 STARD9Q9P2P6 4700 aa6.94□□□□□ -1.3
SLC13A3-201ENST00000279027 Q5W150 140 aa6.93□□□□□ -1.3
SLC13A3-201ENST00000279027 C9orf92A6NGG3 77 aa6.93□□□□□ -1.3
SLC13A3-201ENST00000279027 DNAH7Q8WXX0 4024 aa6.93□□□□□ -1.3
SLC13A3-201ENST00000279027 DNHD1Q96M86 4753 aa6.92□□□□□ -1.3
SLC13A3-201ENST00000279027 C1orf195Q5TG92 126 aa6.92□□□□□ -1.3
SLC13A3-201ENST00000279027 FLG2Q5D862 2391 aaPredicted RBP6.92□□□□□ -1.3
SLC13A3-201ENST00000279027 LOC101927531A0A1B0GV80 90 aa6.92□□□□□ -1.3
SLC13A3-201ENST00000279027 SPANXA2-OT1Q8N9U9 137 aa6.92□□□□□ -1.3
SLC13A3-201ENST00000279027 DNAH1Q9P2D7 4330 aa6.91□□□□□ -1.3
SLC13A3-201ENST00000279027 IGLV7-46A0A075B6I9 117 aa6.9□□□□□ -1.3
SLC13A3-201ENST00000279027 KRTAP13-2Q52LG2 175 aa6.9□□□□□ -1.3
SLC13A3-201ENST00000279027 C8orf87E5RJ46 101 aa6.9□□□□□ -1.31
SLC13A3-201ENST00000279027 PMAIP1Q13794 54 aa6.89□□□□□ -1.31
SLC13A3-201ENST00000279027 FAM229AH3BQW9 127 aa6.88□□□□□ -1.31
SLC13A3-201ENST00000279027 KMT2AQ03164 3969 aa6.88□□□□□ -1.31
SLC13A3-201ENST00000279027 LINC00304Q8N9R0 145 aa6.87□□□□□ -1.31
SLC13A3-201ENST00000279027 Q1T7F1 81 aa6.87□□□□□ -1.31
SLC13A3-201ENST00000279027 C7orf65Q6ZTY9 151 aa6.87□□□□□ -1.31
SLC13A3-201ENST00000279027 ACYP2P14621 99 aa6.86□□□□□ -1.31
SLC13A3-201ENST00000279027 HRES1P13985 223 aa6.85□□□□□ -1.31
SLC13A3-201ENST00000279027 A8MU10 97 aa6.83□□□□□ -1.32
SLC13A3-201ENST00000279027 Q8N1X5 172 aa6.83□□□□□ -1.32
SLC13A3-201ENST00000279027 DNAH11Q96DT5 4516 aa6.81□□□□□ -1.32
SLC13A3-201ENST00000279027 Q5VV11 94 aa6.81□□□□□ -1.32
SLC13A3-201ENST00000279027 VPS13DQ5THJ4 4388 aa6.78□□□□□ -1.32
SLC13A3-201ENST00000279027 A0A1B0GU69 56 aa6.77□□□□□ -1.33
SLC13A3-201ENST00000279027 FRAS1Q86XX4 4008 aa6.74□□□□□ -1.33
SLC13A3-201ENST00000279027 KRTAP1-4P0C5Y4 121 aa6.74□□□□□ -1.33
SLC13A3-201ENST00000279027 Q6ZSA8 131 aa6.73□□□□□ -1.33
SLC13A3-201ENST00000279027 SEC61GP60059 68 aa6.73□□□□□ -1.33
SLC13A3-201ENST00000279027 ASB16-AS1Q495Z4 193 aa6.72□□□□□ -1.33
SLC13A3-201ENST00000279027 SPINK7P58062 85 aa6.72□□□□□ -1.33
SLC13A3-201ENST00000279027 DNAH8Q96JB1 4490 aa6.71□□□□□ -1.34
SLC13A3-201ENST00000279027 DNAH2Q9P225 4427 aa6.7□□□□□ -1.34
SLC13A3-201ENST00000279027 DNAH17Q9UFH2 4485 aa6.68□□□□□ -1.34
SLC13A3-201ENST00000279027 LINC01558Q9Y6Z2 57 aa6.67□□□□□ -1.34
SLC13A3-201ENST00000279027 Q75L30 129 aa6.65□□□□□ -1.34
SLC13A3-201ENST00000279027 DNAH6Q9C0G6 4158 aa6.65□□□□□ -1.34
SLC13A3-201ENST00000279027 LRP1BQ9NZR2 4599 aa6.64□□□□□ -1.35
SLC13A3-201ENST00000279027 LCA10Q71F78 164 aa6.64□□□□□ -1.35
SLC13A3-201ENST00000279027 ATP11AUNQ6ZP68 121 aa6.62□□□□□ -1.35
SLC13A3-201ENST00000279027 DMAC1Q96GE9 116 aa6.62□□□□□ -1.35
SLC13A3-201ENST00000279027 HECTD4Q9Y4D8 3996 aa6.61□□□□□ -1.35
SLC13A3-201ENST00000279027 CDC42SE1Q9NRR8 79 aa6.6□□□□□ -1.35
SLC13A3-201ENST00000279027 DYNC2H1Q8NCM8 4307 aaKnown RBP6.6□□□□□ -1.35
SLC13A3-201ENST00000279027 DNAH5Q8TE73 4624 aa6.56□□□□□ -1.36
SLC13A3-201ENST00000279027 KRTAP16-1A8MUX0 517 aa6.56□□□□□ -1.36
SLC13A3-201ENST00000279027 MIR22HGQ0VDD5 57 aa6.56□□□□□ -1.36
SLC13A3-201ENST00000279027 KRTAP13-3Q3SY46 172 aa6.56□□□□□ -1.36
SLC13A3-201ENST00000279027 HYDINQ4G0P3 5121 aa6.56□□□□□ -1.36
SLC13A3-201ENST00000279027 FAT1Q14517 4588 aa6.56□□□□□ -1.36
SLC13A3-201ENST00000279027 UQCR11O14957 56 aa6.55□□□□□ -1.36
SLC13A3-201ENST00000279027 Q5VSD8 79 aa6.54□□□□□ -1.36
SLC13A3-201ENST00000279027 KRTAP21-3Q3LHN1 58 aa6.47□□□□□ -1.37
SLC13A3-201ENST00000279027 VPS13BQ7Z7G8 4022 aa6.47□□□□□ -1.37
SLC13A3-201ENST00000279027 PRAC1Q96KF2 57 aa6.46□□□□□ -1.37
SLC13A3-201ENST00000279027 KTN1-AS1Q86SY8 53 aa6.46□□□□□ -1.38
SLC13A3-201ENST00000279027 DYNC1H1Q14204 4646 aaKnown RBP6.44□□□□□ -1.38
SLC13A3-201ENST00000279027 A0A1B0GVY2 172 aa6.42□□□□□ -1.38
SLC13A3-201ENST00000279027 PKHD1P08F94 4074 aa6.41□□□□□ -1.38
SLC13A3-201ENST00000279027 ALMS1Q8TCU4 4167 aa6.39□□□□□ -1.39
SLC13A3-201ENST00000279027 A0A0D9SG42 100 aa6.38□□□□□ -1.39
SLC13A3-201ENST00000279027 RPS29P62273 56 aaKnown RBP6.38□□□□□ -1.39
SLC13A3-201ENST00000279027 A8MUU9 505 aa6.37□□□□□ -1.39
SLC13A3-201ENST00000279027 A0A1B0GU33 70 aa6.36□□□□□ -1.39
SLC13A3-201ENST00000279027 K7ERS5 55 aa6.36□□□□□ -1.39
SLC13A3-201ENST00000279027 ADM2Q7Z4H4 148 aa6.36□□□□□ -1.39
SLC13A3-201ENST00000279027 SPATA8Q6RVD6 105 aa6.36□□□□□ -1.39
SLC13A3-201ENST00000279027 A6NN06 94 aa6.35□□□□□ -1.39
SLC13A3-201ENST00000279027 C20orf166-AS1Q96NR2 134 aa6.35□□□□□ -1.39
SLC13A3-201ENST00000279027 SACSQ9NZJ4 4579 aa6.34□□□□□ -1.39
SLC13A3-201ENST00000279027 RBM12B-AS1Q9P1G2 102 aa6.34□□□□□ -1.39
SLC13A3-201ENST00000279027 FAT2Q9NYQ8 4349 aa6.32□□□□□ -1.4
SLC13A3-201ENST00000279027 COX6B2Q6YFQ2 88 aa6.32□□□□□ -1.4
SLC13A3-201ENST00000279027 CRIPTQ9P021 101 aa6.29□□□□□ -1.4
SLC13A3-201ENST00000279027 MYCBP2O75592 4640 aa6.29□□□□□ -1.4
SLC13A3-201ENST00000279027 J3QL48 77 aa6.26□□□□□ -1.41
SLC13A3-201ENST00000279027 KRTAP10-4P60372 401 aaPredicted RBP6.26□□□□□ -1.41
SLC13A3-201ENST00000279027 PKD1P98161 4303 aa6.25□□□□□ -1.41
SLC13A3-201ENST00000279027 LRP1Q07954 4544 aaKnown RBP6.24□□□□□ -1.41
SLC13A3-201ENST00000279027 KRTAP3-1Q9BYR8 98 aa6.24□□□□□ -1.41
SLC13A3-201ENST00000279027 H1FX-AS1Q4G0G2 97 aa6.23□□□□□ -1.41
SLC13A3-201ENST00000279027 S4R3F8 94 aa6.23□□□□□ -1.41
SLC13A3-201ENST00000279027 XP32Q5T750 250 aa6.22□□□□□ -1.41
SLC13A3-201ENST00000279027 APOBP04114 4563 aaKnown RBP6.22□□□□□ -1.41
SLC13A3-201ENST00000279027 CSAG1Q6PB30 78 aa6.22□□□□□ -1.41
SLC13A3-201ENST00000279027 KMT2CQ8NEZ4 4911 aaKnown RBP6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms