RNA–Protein interactions for RNA: ENST00000273063.10

SLC4A3-201, Transcript of solute carrier family 4 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC4A3, Length 4,246 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A3-201ENST00000273063 Q8N9P0 234 aaPredicted RBP9.8□□□□□ -0.84
SLC4A3-201ENST00000273063 CD164Q04900 197 aa9.79□□□□□ -0.84
SLC4A3-201ENST00000273063 HRES1P13985 223 aa9.76□□□□□ -0.85
SLC4A3-201ENST00000273063 KRTAP10-2P60368 255 aa9.74□□□□□ -0.85
SLC4A3-201ENST00000273063 MIR22HGQ0VDD5 57 aa9.73□□□□□ -0.85
SLC4A3-201ENST00000273063 KRTAP29-1A8MX34 341 aaPredicted RBP9.71□□□□□ -0.85
SLC4A3-201ENST00000273063 TRRAPQ9Y4A5 3859 aa9.69□□□□□ -0.86
SLC4A3-201ENST00000273063 KRTAP10-1P60331 282 aa9.67□□□□□ -0.86
SLC4A3-201ENST00000273063 Q6ZRN7 208 aaPredicted RBP9.66□□□□□ -0.86
SLC4A3-201ENST00000273063 CDC42SE1Q9NRR8 79 aa9.66□□□□□ -0.86
SLC4A3-201ENST00000273063 Q6ZR54 194 aa9.65□□□□□ -0.86
SLC4A3-201ENST00000273063 VPS13CQ709C8 3753 aa9.65□□□□□ -0.86
SLC4A3-201ENST00000273063 ZCCHC13Q8WW36 166 aaKnown RBP9.65□□□□□ -0.86
SLC4A3-201ENST00000273063 LINC00483Q53H64 154 aa9.64□□□□□ -0.87
SLC4A3-201ENST00000273063 Q5W150 140 aa9.64□□□□□ -0.87
SLC4A3-201ENST00000273063 A0A087X002 238 aa9.64□□□□□ -0.87
SLC4A3-201ENST00000273063 NOTCH2NLQ7Z3S9 236 aa9.64□□□□□ -0.87
SLC4A3-201ENST00000273063 Q5VV11 94 aa9.62□□□□□ -0.87
SLC4A3-201ENST00000273063 KTN1-AS1Q86SY8 53 aa9.59□□□□□ -0.87
SLC4A3-201ENST00000273063 Q75L30 129 aa9.59□□□□□ -0.87
SLC4A3-201ENST00000273063 LINC01558Q9Y6Z2 57 aa9.58□□□□□ -0.88
SLC4A3-201ENST00000273063 SPINK7P58062 85 aa9.52□□□□□ -0.89
SLC4A3-201ENST00000273063 KRTAP13-1Q8IUC0 172 aa9.51□□□□□ -0.89
SLC4A3-201ENST00000273063 LCE6AA0A183 80 aa9.48□□□□□ -0.89
SLC4A3-201ENST00000273063 A0A0D9SG42 100 aa9.44□□□□□ -0.9
SLC4A3-201ENST00000273063 J3QL48 77 aa9.44□□□□□ -0.9
SLC4A3-201ENST00000273063 LCA10Q71F78 164 aa9.4□□□□□ -0.9
SLC4A3-201ENST00000273063 DMAC1Q96GE9 116 aa9.39□□□□□ -0.91
SLC4A3-201ENST00000273063 A0A1B0GU33 70 aa9.38□□□□□ -0.91
SLC4A3-201ENST00000273063 FBN3Q75N90 2809 aa9.36□□□□□ -0.91
SLC4A3-201ENST00000273063 ZNF469Q96JG9 3925 aaPredicted RBP9.36□□□□□ -0.91
SLC4A3-201ENST00000273063 KRTAP13-2Q52LG2 175 aa9.35□□□□□ -0.91
SLC4A3-201ENST00000273063 PRAC1Q96KF2 57 aa9.34□□□□□ -0.91
SLC4A3-201ENST00000273063 COL7A1Q02388 2944 aa9.32□□□□□ -0.92
SLC4A3-201ENST00000273063 LINC01554Q52M75 96 aa9.3□□□□□ -0.92
SLC4A3-201ENST00000273063 RBM12B-AS1Q9P1G2 102 aa9.3□□□□□ -0.92
SLC4A3-201ENST00000273063 SPINT4Q6UDR6 99 aa9.29□□□□□ -0.92
SLC4A3-201ENST00000273063 COX6B2Q6YFQ2 88 aa9.29□□□□□ -0.92
SLC4A3-201ENST00000273063 A8MU10 97 aa9.28□□□□□ -0.92
SLC4A3-201ENST00000273063 ASB16-AS1Q495Z4 193 aa9.26□□□□□ -0.93
SLC4A3-201ENST00000273063 Q6ZSA8 131 aa9.25□□□□□ -0.93
SLC4A3-201ENST00000273063 Q5VSD8 79 aa9.23□□□□□ -0.93
SLC4A3-201ENST00000273063 CRIPTQ9P021 101 aa9.21□□□□□ -0.93
SLC4A3-201ENST00000273063 ANK3Q12955 4377 aaKnown RBP9.18□□□□□ -0.94
SLC4A3-201ENST00000273063 CSAG1Q6PB30 78 aa9.11□□□□□ -0.95
SLC4A3-201ENST00000273063 S4R3F8 94 aa9.1□□□□□ -0.95
SLC4A3-201ENST00000273063 CSMD3Q7Z407 3707 aa9.08□□□□□ -0.96
SLC4A3-201ENST00000273063 MEGF8Q7Z7M0 2845 aa9.06□□□□□ -0.96
SLC4A3-201ENST00000273063 SPATA8Q6RVD6 105 aa9.06□□□□□ -0.96
SLC4A3-201ENST00000273063 KRTAP1-4P0C5Y4 121 aa9.03□□□□□ -0.96
SLC4A3-201ENST00000273063 H1FX-AS1Q4G0G2 97 aa9.01□□□□□ -0.97
SLC4A3-201ENST00000273063 RPS29P62273 56 aaKnown RBP9□□□□□ -0.97
SLC4A3-201ENST00000273063 A6NN06 94 aa8.98□□□□□ -0.97
SLC4A3-201ENST00000273063 RPL37P61927 97 aaKnown RBP8.94□□□□□ -0.98
SLC4A3-201ENST00000273063 ADM2Q7Z4H4 148 aa8.92□□□□□ -0.98
SLC4A3-201ENST00000273063 R4GN34 69 aa8.88□□□□□ -0.99
SLC4A3-201ENST00000273063 CAMK2N1Q7Z7J9 78 aa8.87□□□□□ -0.99
SLC4A3-201ENST00000273063 A8MUU9 505 aa8.85□□□□□ -0.99
SLC4A3-201ENST00000273063 SEC61BP60468 96 aaKnown RBP8.83□□□□□ -1
SLC4A3-201ENST00000273063 C20orf166-AS1Q96NR2 134 aa8.82□□□□□ -1
SLC4A3-201ENST00000273063 KRTAP16-1A8MUX0 517 aa8.81□□□□□ -1
SLC4A3-201ENST00000273063 ROMO1P60602 79 aa8.8□□□□□ -1
SLC4A3-201ENST00000273063 M0QZ58 72 aa8.78□□□□□ -1
SLC4A3-201ENST00000273063 KRTAP21-3Q3LHN1 58 aa8.78□□□□□ -1
SLC4A3-201ENST00000273063 M0R2T5 61 aa8.72□□□□□ -1.01
SLC4A3-201ENST00000273063 KRTAP13-3Q3SY46 172 aa8.7□□□□□ -1.02
SLC4A3-201ENST00000273063 AKAP9Q99996 3911 aa8.65□□□□□ -1.03
SLC4A3-201ENST00000273063 KRTAP25-1Q3LHN0 102 aa8.59□□□□□ -1.03
SLC4A3-201ENST00000273063 XP32Q5T750 250 aa8.59□□□□□ -1.03
SLC4A3-201ENST00000273063 H3BS24 57 aa8.57□□□□□ -1.04
SLC4A3-201ENST00000273063 H0YAA0 97 aa8.56□□□□□ -1.04
SLC4A3-201ENST00000273063 LUZP6Q538Z0 58 aa8.55□□□□□ -1.04
SLC4A3-201ENST00000273063 DNHD1Q96M86 4753 aa8.52□□□□□ -1.05
SLC4A3-201ENST00000273063 HUWE1Q7Z6Z7 4374 aaKnown RBP8.47□□□□□ -1.05
SLC4A3-201ENST00000273063 A0A1B0GVY2 172 aa8.44□□□□□ -1.06
SLC4A3-201ENST00000273063 P0C880 135 aa8.36□□□□□ -1.07
SLC4A3-201ENST00000273063 KRTAP10-8P60410 259 aa8.36□□□□□ -1.07
SLC4A3-201ENST00000273063 C10orf95Q9H7T3 257 aa8.33□□□□□ -1.08
SLC4A3-201ENST00000273063 TPRXLQ17RH7 258 aa8.29□□□□□ -1.08
SLC4A3-201ENST00000273063 KRTAP3-1Q9BYR8 98 aa8.27□□□□□ -1.09
SLC4A3-201ENST00000273063 PLAC4Q8WY50 150 aa8.22□□□□□ -1.09
SLC4A3-201ENST00000273063 DNAH9Q9NYC9 4486 aa8.17□□□□□ -1.1
SLC4A3-201ENST00000273063 NDUFAF8A1L188 74 aa8.17□□□□□ -1.1
SLC4A3-201ENST00000273063 PLECQ15149 4684 aaKnown RBP8.13□□□□□ -1.11
SLC4A3-201ENST00000273063 DNAH10Q8IVF4 4471 aa8.12□□□□□ -1.11
SLC4A3-201ENST00000273063 DNAH11Q96DT5 4516 aa8.05□□□□□ -1.12
SLC4A3-201ENST00000273063 A0A0A0MQY5 61 aa8.03□□□□□ -1.12
SLC4A3-201ENST00000273063 TNP1P09430 55 aa8.02□□□□□ -1.13
SLC4A3-201ENST00000273063 PRKDCP78527 4128 aaKnown RBP8.01□□□□□ -1.13
SLC4A3-201ENST00000273063 KRTAP12-2P59991 146 aa8□□□□□ -1.13
SLC4A3-201ENST00000273063 DNAH1Q9P2D7 4330 aa7.99□□□□□ -1.13
SLC4A3-201ENST00000273063 KRTAP10-4P60372 401 aaPredicted RBP7.96□□□□□ -1.14
SLC4A3-201ENST00000273063 KRTAP13-4Q3LI77 160 aa7.95□□□□□ -1.14
SLC4A3-201ENST00000273063 DNAH5Q8TE73 4624 aa7.95□□□□□ -1.14
SLC4A3-201ENST00000273063 KRTAP10-6P60371 365 aaPredicted RBP7.95□□□□□ -1.14
SLC4A3-201ENST00000273063 FAT1Q14517 4588 aa7.94□□□□□ -1.14
SLC4A3-201ENST00000273063 STARD9Q9P2P6 4700 aa7.94□□□□□ -1.14
SLC4A3-201ENST00000273063 ANK2Q01484 3957 aa7.92□□□□□ -1.14
SLC4A3-201ENST00000273063 KRTAP4-5Q9BYR2 181 aa7.92□□□□□ -1.14
SLC4A3-201ENST00000273063 KRTAP12-1P59990 96 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms