RNA–Protein interactions for RNA: ENST00000271588.8

HMCN1-201, Transcript of hemicentin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCN1, Length 18,208 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-201ENST00000271588 KRTAP1-4P0C5Y4 121 aa2.59□□□□□ -1.99
HMCN1-201ENST00000271588 ASH1LQ9NR48 2969 aaKnown RBP2.59□□□□□ -1.99
HMCN1-201ENST00000271588 TENM4Q6N022 2769 aa2.59□□□□□ -2
HMCN1-201ENST00000271588 LRBAP50851 2863 aa2.58□□□□□ -2
HMCN1-201ENST00000271588 KRTAP23-1A1A580 65 aa2.58□□□□□ -2
HMCN1-201ENST00000271588 XP32Q5T750 250 aa2.57□□□□□ -2
HMCN1-201ENST00000271588 FRYQ5TBA9 3013 aa2.57□□□□□ -2
HMCN1-201ENST00000271588 CHD7Q9P2D1 2997 aa2.57□□□□□ -2
HMCN1-201ENST00000271588 DNAH12Q6ZR08 3092 aa2.57□□□□□ -2
HMCN1-201ENST00000271588 KRTAP13-4Q3LI77 160 aa2.56□□□□□ -2
HMCN1-201ENST00000271588 REV3LO60673 3130 aa2.56□□□□□ -2
HMCN1-201ENST00000271588 TACC2O95359 2948 aa2.55□□□□□ -2
HMCN1-201ENST00000271588 TRIOO75962 3097 aa2.54□□□□□ -2
HMCN1-201ENST00000271588 UTRNP46939 3433 aa2.54□□□□□ -2
HMCN1-201ENST00000271588 HUWE1Q7Z6Z7 4374 aaKnown RBP2.52□□□□□ -2.01
HMCN1-201ENST00000271588 KRTAP10-8P60410 259 aa2.52□□□□□ -2.01
HMCN1-201ENST00000271588 ZANQ9Y493 2812 aa2.51□□□□□ -2.01
HMCN1-201ENST00000271588 KRTAP15-1Q3LI76 137 aa2.5□□□□□ -2.01
HMCN1-201ENST00000271588 DCHS2Q6V1P9 2916 aa2.5□□□□□ -2.01
HMCN1-201ENST00000271588 MXRA5Q9NR99 2828 aa2.49□□□□□ -2.01
HMCN1-201ENST00000271588 ZZEF1O43149 2961 aa2.47□□□□□ -2.01
HMCN1-201ENST00000271588 TENM2Q9NT68 2774 aa2.47□□□□□ -2.01
HMCN1-201ENST00000271588 DNAH11Q96DT5 4516 aa2.47□□□□□ -2.01
HMCN1-201ENST00000271588 DNAH2Q9P225 4427 aa2.46□□□□□ -2.02
HMCN1-201ENST00000271588 C5orf42Q9H799 3197 aa2.46□□□□□ -2.02
HMCN1-201ENST00000271588 HTTP42858 3142 aa2.46□□□□□ -2.02
HMCN1-201ENST00000271588 KRTAP12-1P59990 96 aa2.44□□□□□ -2.02
HMCN1-201ENST00000271588 SRRM2Q9UQ35 2752 aaKnown RBP2.43□□□□□ -2.02
HMCN1-201ENST00000271588 DNAH1Q9P2D7 4330 aa2.43□□□□□ -2.02
HMCN1-201ENST00000271588 LAMA1P25391 3075 aa2.42□□□□□ -2.02
HMCN1-201ENST00000271588 COL12A1Q99715 3063 aa2.42□□□□□ -2.02
HMCN1-201ENST00000271588 CDH23Q9H251 3354 aa2.42□□□□□ -2.02
HMCN1-201ENST00000271588 HRNRQ86YZ3 2850 aaPredicted RBP2.42□□□□□ -2.02
HMCN1-201ENST00000271588 SZT2Q5T011 3432 aa2.42□□□□□ -2.02
HMCN1-201ENST00000271588 NBEAQ8NFP9 2946 aa2.41□□□□□ -2.02
HMCN1-201ENST00000271588 TNRC18O15417 2968 aaPredicted RBP2.41□□□□□ -2.02
HMCN1-201ENST00000271588 BOD1L1Q8NFC6 3051 aa2.4□□□□□ -2.03
HMCN1-201ENST00000271588 KRTAP19-4Q3LI73 84 aa2.4□□□□□ -2.03
HMCN1-201ENST00000271588 UNC80Q8N2C7 3258 aa2.39□□□□□ -2.03
HMCN1-201ENST00000271588 KRTAP12-2P59991 146 aa2.39□□□□□ -2.03
HMCN1-201ENST00000271588 VWFP04275 2813 aa2.38□□□□□ -2.03
HMCN1-201ENST00000271588 VPS13AQ96RL7 3174 aa2.38□□□□□ -2.03
HMCN1-201ENST00000271588 CELSR3Q9NYQ7 3312 aa2.37□□□□□ -2.03
HMCN1-201ENST00000271588 ATMQ13315 3056 aa2.37□□□□□ -2.03
HMCN1-201ENST00000271588 A0A1B0GVY2 172 aa2.37□□□□□ -2.03
HMCN1-201ENST00000271588 FBN2P35556 2912 aa2.36□□□□□ -2.03
HMCN1-201ENST00000271588 PKD1L1Q8TDX9 2849 aa2.36□□□□□ -2.03
HMCN1-201ENST00000271588 KRTAP10-10P60014 251 aa2.36□□□□□ -2.03
HMCN1-201ENST00000271588 KRTAP10-6P60371 365 aaPredicted RBP2.35□□□□□ -2.03
HMCN1-201ENST00000271588 FRAS1Q86XX4 4008 aa2.34□□□□□ -2.03
HMCN1-201ENST00000271588 MKI67P46013 3256 aaKnown RBP2.34□□□□□ -2.04
HMCN1-201ENST00000271588 XIRP2A4UGR9 3374 aa2.33□□□□□ -2.04
HMCN1-201ENST00000271588 WDFY4Q6ZS81 3184 aa2.33□□□□□ -2.04
HMCN1-201ENST00000271588 CFAP47Q6ZTR5 3102 aa2.33□□□□□ -2.04
HMCN1-201ENST00000271588 CMYA5Q8N3K9 4069 aa2.33□□□□□ -2.04
HMCN1-201ENST00000271588 LAMA3Q16787 3333 aa2.33□□□□□ -2.04
HMCN1-201ENST00000271588 BRCA2P51587 3418 aa2.33□□□□□ -2.04
HMCN1-201ENST00000271588 CELSR1Q9NYQ6 3014 aa2.32□□□□□ -2.04
HMCN1-201ENST00000271588 ADGRG4Q8IZF6 3080 aa2.32□□□□□ -2.04
HMCN1-201ENST00000271588 KRTAP3-1Q9BYR8 98 aa2.32□□□□□ -2.04
HMCN1-201ENST00000271588 VPS13DQ5THJ4 4388 aa2.31□□□□□ -2.04
HMCN1-201ENST00000271588 DNAH14Q0VDD8 3507 aa2.31□□□□□ -2.04
HMCN1-201ENST00000271588 DMXL1Q9Y485 3027 aa2.31□□□□□ -2.04
HMCN1-201ENST00000271588 RANBP2P49792 3224 aaKnown RBP2.3□□□□□ -2.04
HMCN1-201ENST00000271588 DNAH10Q8IVF4 4471 aa2.3□□□□□ -2.04
HMCN1-201ENST00000271588 AKAP9Q99996 3911 aa2.29□□□□□ -2.04
HMCN1-201ENST00000271588 MEGF8Q7Z7M0 2845 aa2.29□□□□□ -2.04
HMCN1-201ENST00000271588 ALMS1Q8TCU4 4167 aa2.27□□□□□ -2.05
HMCN1-201ENST00000271588 COL7A1Q02388 2944 aa2.25□□□□□ -2.05
HMCN1-201ENST00000271588 DNAH17Q9UFH2 4485 aa2.25□□□□□ -2.05
HMCN1-201ENST00000271588 KRTAP3-2Q9BYR7 98 aa2.25□□□□□ -2.05
HMCN1-201ENST00000271588 FBN3Q75N90 2809 aa2.25□□□□□ -2.05
HMCN1-201ENST00000271588 VCANP13611 3396 aa2.25□□□□□ -2.05
HMCN1-201ENST00000271588 PLECQ15149 4684 aaKnown RBP2.25□□□□□ -2.05
HMCN1-201ENST00000271588 NBPF19A0A087WUL8 3843 aa2.24□□□□□ -2.05
HMCN1-201ENST00000271588 MYO15AQ9UKN7 3530 aa2.24□□□□□ -2.05
HMCN1-201ENST00000271588 DNAH3Q8TD57 4116 aa2.23□□□□□ -2.05
HMCN1-201ENST00000271588 COL6A3P12111 3177 aa2.23□□□□□ -2.05
HMCN1-201ENST00000271588 SPEGQ15772 3267 aa2.22□□□□□ -2.05
HMCN1-201ENST00000271588 KRTAP10-12P60413 245 aa2.22□□□□□ -2.05
HMCN1-201ENST00000271588 DNAH6Q9C0G6 4158 aa2.21□□□□□ -2.06
HMCN1-201ENST00000271588 BSNQ9UPA5 3926 aa2.21□□□□□ -2.06
HMCN1-201ENST00000271588 KRTAP3-3Q9BYR6 98 aa2.2□□□□□ -2.06
HMCN1-201ENST00000271588 DNAH9Q9NYC9 4486 aa2.17□□□□□ -2.06
HMCN1-201ENST00000271588 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
HMCN1-201ENST00000271588 FAT3Q8TDW7 4589 aa2.16□□□□□ -2.06
HMCN1-201ENST00000271588 EYSQ5T1H1 3165 aa2.16□□□□□ -2.06
HMCN1-201ENST00000271588 DNAH7Q8WXX0 4024 aa2.15□□□□□ -2.06
HMCN1-201ENST00000271588 USP34Q70CQ2 3546 aa2.15□□□□□ -2.07
HMCN1-201ENST00000271588 FBN1P35555 2871 aaKnown RBP2.15□□□□□ -2.07
HMCN1-201ENST00000271588 DCHS1Q96JQ0 3298 aa2.14□□□□□ -2.07
HMCN1-201ENST00000271588 ANK3Q12955 4377 aaKnown RBP2.14□□□□□ -2.07
HMCN1-201ENST00000271588 OTOGQ6ZRI0 2925 aa2.13□□□□□ -2.07
HMCN1-201ENST00000271588 APOBP04114 4563 aaKnown RBP2.13□□□□□ -2.07
HMCN1-201ENST00000271588 PRKDCP78527 4128 aaKnown RBP2.13□□□□□ -2.07
HMCN1-201ENST00000271588 MT1HL1P0DM35 61 aa2.12□□□□□ -2.07
HMCN1-201ENST00000271588 SACSQ9NZJ4 4579 aa2.12□□□□□ -2.07
HMCN1-201ENST00000271588 ASPMQ8IZT6 3477 aa2.12□□□□□ -2.07
HMCN1-201ENST00000271588 KRTAP10-4P60372 401 aaPredicted RBP2.11□□□□□ -2.07
HMCN1-201ENST00000271588 PKHD1P08F94 4074 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms