RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 SPINK7P58062 85 aa8.08□□□□□ -1.12
NPC1-201ENST00000269228 KRTAP7-1Q8IUC3 87 aa8.06□□□□□ -1.12
NPC1-201ENST00000269228 RELNP78509 3460 aa8.05□□□□□ -1.12
NPC1-201ENST00000269228 Q75L30 129 aa8.05□□□□□ -1.12
NPC1-201ENST00000269228 SEC61BP60468 96 aaKnown RBP8.05□□□□□ -1.12
NPC1-201ENST00000269228 Q5VV11 94 aa8.05□□□□□ -1.12
NPC1-201ENST00000269228 MXRA5Q9NR99 2828 aa8.03□□□□□ -1.12
NPC1-201ENST00000269228 DCHS1Q96JQ0 3298 aa8.03□□□□□ -1.12
NPC1-201ENST00000269228 A0A0A0MQY5 61 aa7.99□□□□□ -1.13
NPC1-201ENST00000269228 CSAG1Q6PB30 78 aa7.99□□□□□ -1.13
NPC1-201ENST00000269228 S4R3F8 94 aa7.97□□□□□ -1.13
NPC1-201ENST00000269228 A0A1B0GU33 70 aa7.94□□□□□ -1.14
NPC1-201ENST00000269228 LINC01558Q9Y6Z2 57 aa7.94□□□□□ -1.14
NPC1-201ENST00000269228 LAMA5O15230 3695 aa7.93□□□□□ -1.14
NPC1-201ENST00000269228 MUC3AQ02505 3323 aa7.92□□□□□ -1.14
NPC1-201ENST00000269228 TENM1Q9UKZ4 2725 aa7.91□□□□□ -1.14
NPC1-201ENST00000269228 WDFY3Q8IZQ1 3526 aa7.91□□□□□ -1.14
NPC1-201ENST00000269228 NOTCH2NLQ7Z3S9 236 aa7.9□□□□□ -1.14
NPC1-201ENST00000269228 KRTAP13-1Q8IUC0 172 aa7.9□□□□□ -1.14
NPC1-201ENST00000269228 KRTAP13-2Q52LG2 175 aa7.9□□□□□ -1.15
NPC1-201ENST00000269228 KRTAP29-1A8MX34 341 aaPredicted RBP7.88□□□□□ -1.15
NPC1-201ENST00000269228 DMAC1Q96GE9 116 aa7.88□□□□□ -1.15
NPC1-201ENST00000269228 TENM3Q9P273 2699 aa7.88□□□□□ -1.15
NPC1-201ENST00000269228 CAMK2N1Q7Z7J9 78 aa7.87□□□□□ -1.15
NPC1-201ENST00000269228 CELSR1Q9NYQ6 3014 aa7.86□□□□□ -1.15
NPC1-201ENST00000269228 PDZD2O15018 2839 aa7.83□□□□□ -1.16
NPC1-201ENST00000269228 ASB16-AS1Q495Z4 193 aa7.83□□□□□ -1.16
NPC1-201ENST00000269228 ASPMQ8IZT6 3477 aa7.83□□□□□ -1.16
NPC1-201ENST00000269228 TENM2Q9NT68 2774 aa7.83□□□□□ -1.16
NPC1-201ENST00000269228 RPS29P62273 56 aaKnown RBP7.82□□□□□ -1.16
NPC1-201ENST00000269228 DMDP11532 3685 aa7.81□□□□□ -1.16
NPC1-201ENST00000269228 PKD1L1Q8TDX9 2849 aa7.8□□□□□ -1.16
NPC1-201ENST00000269228 R4GN34 69 aa7.79□□□□□ -1.16
NPC1-201ENST00000269228 A8MU10 97 aa7.73□□□□□ -1.17
NPC1-201ENST00000269228 ZFHX4Q86UP3 3567 aa7.71□□□□□ -1.17
NPC1-201ENST00000269228 OTOGQ6ZRI0 2925 aa7.7□□□□□ -1.18
NPC1-201ENST00000269228 NBPF19A0A087WUL8 3843 aa7.67□□□□□ -1.18
NPC1-201ENST00000269228 FBN1P35555 2871 aaKnown RBP7.67□□□□□ -1.18
NPC1-201ENST00000269228 M0QZ58 72 aa7.66□□□□□ -1.18
NPC1-201ENST00000269228 A6NN06 94 aa7.64□□□□□ -1.19
NPC1-201ENST00000269228 VWFP04275 2813 aa7.63□□□□□ -1.19
NPC1-201ENST00000269228 RPL37P61927 97 aaKnown RBP7.63□□□□□ -1.19
NPC1-201ENST00000269228 ADM2Q7Z4H4 148 aa7.62□□□□□ -1.19
NPC1-201ENST00000269228 H1FX-AS1Q4G0G2 97 aa7.61□□□□□ -1.19
NPC1-201ENST00000269228 KRTAP1-4P0C5Y4 121 aa7.61□□□□□ -1.19
NPC1-201ENST00000269228 KRTAP16-1A8MUX0 517 aa7.6□□□□□ -1.19
NPC1-201ENST00000269228 ZFHX3Q15911 3703 aa7.6□□□□□ -1.19
NPC1-201ENST00000269228 TGP01266 2768 aa7.6□□□□□ -1.19
NPC1-201ENST00000269228 SPATA8Q6RVD6 105 aa7.55□□□□□ -1.2
NPC1-201ENST00000269228 SMG1Q96Q15 3661 aaKnown RBP7.55□□□□□ -1.2
NPC1-201ENST00000269228 ROMO1P60602 79 aa7.5□□□□□ -1.21
NPC1-201ENST00000269228 A8MUU9 505 aa7.5□□□□□ -1.21
NPC1-201ENST00000269228 C20orf166-AS1Q96NR2 134 aa7.48□□□□□ -1.21
NPC1-201ENST00000269228 PLAC4Q8WY50 150 aa7.47□□□□□ -1.21
NPC1-201ENST00000269228 CSMD1Q96PZ7 3565 aa7.42□□□□□ -1.22
NPC1-201ENST00000269228 XP32Q5T750 250 aa7.42□□□□□ -1.22
NPC1-201ENST00000269228 A0A1B0GVY2 172 aa7.39□□□□□ -1.23
NPC1-201ENST00000269228 CSMD2Q7Z408 3487 aa7.38□□□□□ -1.23
NPC1-201ENST00000269228 KRTAP25-1Q3LHN0 102 aa7.37□□□□□ -1.23
NPC1-201ENST00000269228 ANK3Q12955 4377 aaKnown RBP7.33□□□□□ -1.24
NPC1-201ENST00000269228 SPENQ96T58 3664 aaKnown RBP7.32□□□□□ -1.24
NPC1-201ENST00000269228 SVEP1Q4LDE5 3571 aa7.31□□□□□ -1.24
NPC1-201ENST00000269228 SRRM2Q9UQ35 2752 aaKnown RBP7.31□□□□□ -1.24
NPC1-201ENST00000269228 TPRXLQ17RH7 258 aa7.3□□□□□ -1.24
NPC1-201ENST00000269228 NDUFAF8A1L188 74 aa7.3□□□□□ -1.24
NPC1-201ENST00000269228 KRTAP13-3Q3SY46 172 aa7.23□□□□□ -1.25
NPC1-201ENST00000269228 KRTAP10-8P60410 259 aa7.22□□□□□ -1.25
NPC1-201ENST00000269228 TRRAPQ9Y4A5 3859 aa7.18□□□□□ -1.26
NPC1-201ENST00000269228 CUBNO60494 3623 aa7.18□□□□□ -1.26
NPC1-201ENST00000269228 BSNQ9UPA5 3926 aa7.15□□□□□ -1.27
NPC1-201ENST00000269228 FBN3Q75N90 2809 aa7.14□□□□□ -1.27
NPC1-201ENST00000269228 MEGF8Q7Z7M0 2845 aa7.04□□□□□ -1.28
NPC1-201ENST00000269228 KRTAP10-10P60014 251 aa7□□□□□ -1.29
NPC1-201ENST00000269228 TNP1P09430 55 aa7□□□□□ -1.29
NPC1-201ENST00000269228 COL7A1Q02388 2944 aa7□□□□□ -1.29
NPC1-201ENST00000269228 C10orf95Q9H7T3 257 aa6.97□□□□□ -1.29
NPC1-201ENST00000269228 P0C880 135 aa6.92□□□□□ -1.3
NPC1-201ENST00000269228 H0YAA0 97 aa6.9□□□□□ -1.3
NPC1-201ENST00000269228 PP632Q6XCG6 107 aa6.82□□□□□ -1.32
NPC1-201ENST00000269228 HUWE1Q7Z6Z7 4374 aaKnown RBP6.8□□□□□ -1.32
NPC1-201ENST00000269228 VPS13CQ709C8 3753 aa6.8□□□□□ -1.32
NPC1-201ENST00000269228 MT1HL1P0DM35 61 aa6.75□□□□□ -1.33
NPC1-201ENST00000269228 PRO2289Q9P1D8 64 aa6.71□□□□□ -1.34
NPC1-201ENST00000269228 ZNF469Q96JG9 3925 aaPredicted RBP6.7□□□□□ -1.34
NPC1-201ENST00000269228 KRTAP4-5Q9BYR2 181 aa6.69□□□□□ -1.34
NPC1-201ENST00000269228 KRTAP3-1Q9BYR8 98 aa6.68□□□□□ -1.34
NPC1-201ENST00000269228 KRTAP10-4P60372 401 aaPredicted RBP6.65□□□□□ -1.34
NPC1-201ENST00000269228 AKAP9Q99996 3911 aa6.61□□□□□ -1.35
NPC1-201ENST00000269228 DNAH9Q9NYC9 4486 aa6.57□□□□□ -1.36
NPC1-201ENST00000269228 KRTAP12-2P59991 146 aa6.55□□□□□ -1.36
NPC1-201ENST00000269228 DNHD1Q96M86 4753 aa6.53□□□□□ -1.36
NPC1-201ENST00000269228 ALMS1Q8TCU4 4167 aa6.49□□□□□ -1.37
NPC1-201ENST00000269228 KRTAP12-1P59990 96 aa6.46□□□□□ -1.38
NPC1-201ENST00000269228 CSMD3Q7Z407 3707 aa6.44□□□□□ -1.38
NPC1-201ENST00000269228 DNAH5Q8TE73 4624 aa6.41□□□□□ -1.38
NPC1-201ENST00000269228 KRTAP10-6P60371 365 aaPredicted RBP6.4□□□□□ -1.39
NPC1-201ENST00000269228 KRTAP13-4Q3LI77 160 aa6.38□□□□□ -1.39
NPC1-201ENST00000269228 PLECQ15149 4684 aaKnown RBP6.37□□□□□ -1.39
NPC1-201ENST00000269228 DNAH1Q9P2D7 4330 aa6.31□□□□□ -1.4
NPC1-201ENST00000269228 KRTAP3-3Q9BYR6 98 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms