RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 LINC00483Q53H64 154 aa10.19□□□□□ -0.78
SPG7-201ENST00000268704 TP53AIP1Q9HCN2 124 aa10.18□□□□□ -0.78
SPG7-201ENST00000268704 Q6ZR54 194 aa10.17□□□□□ -0.78
SPG7-201ENST00000268704 SPINK7P58062 85 aa10.16□□□□□ -0.78
SPG7-201ENST00000268704 FBN3Q75N90 2809 aa10.15□□□□□ -0.78
SPG7-201ENST00000268704 DNAH2Q9P225 4427 aa10.15□□□□□ -0.79
SPG7-201ENST00000268704 VPS13DQ5THJ4 4388 aa10.15□□□□□ -0.79
SPG7-201ENST00000268704 CDK2AP2O75956 126 aa10.15□□□□□ -0.79
SPG7-201ENST00000268704 SPINK6Q6UWN8 80 aa10.15□□□□□ -0.79
SPG7-201ENST00000268704 A6NN06 94 aa10.14□□□□□ -0.79
SPG7-201ENST00000268704 MRPL34Q9BQ48 92 aaKnown RBP10.14□□□□□ -0.79
SPG7-201ENST00000268704 DNAH17Q9UFH2 4485 aa10.14□□□□□ -0.79
SPG7-201ENST00000268704 ATP11AUNQ6ZP68 121 aa10.13□□□□□ -0.79
SPG7-201ENST00000268704 A0A087WTM6 91 aa10.13□□□□□ -0.79
SPG7-201ENST00000268704 IGLV5-52A0A0A0MRZ9 124 aa10.13□□□□□ -0.79
SPG7-201ENST00000268704 PRAC1Q96KF2 57 aa10.13□□□□□ -0.79
SPG7-201ENST00000268704 Q75L30 129 aa10.12□□□□□ -0.79
SPG7-201ENST00000268704 RTL8CO15255 209 aa10.11□□□□□ -0.79
SPG7-201ENST00000268704 HRES1P13985 223 aa10.11□□□□□ -0.79
SPG7-201ENST00000268704 TGP01266 2768 aa10.11□□□□□ -0.79
SPG7-201ENST00000268704 LOC101927531A0A1B0GV80 90 aa10.1□□□□□ -0.79
SPG7-201ENST00000268704 ZNF706Q9Y5V0 76 aaPredicted RBP10.09□□□□□ -0.79
SPG7-201ENST00000268704 PRKDCP78527 4128 aaKnown RBP10.08□□□□□ -0.8
SPG7-201ENST00000268704 NUPR2A6NF83 97 aa10.08□□□□□ -0.8
SPG7-201ENST00000268704 Q5W150 140 aa10.08□□□□□ -0.8
SPG7-201ENST00000268704 ZNF861PO60384 105 aa10.07□□□□□ -0.8
SPG7-201ENST00000268704 ADM2Q7Z4H4 148 aa10.06□□□□□ -0.8
SPG7-201ENST00000268704 CDC42SE1Q9NRR8 79 aa10.05□□□□□ -0.8
SPG7-201ENST00000268704 CIRBP-AS1Q8TBR5 109 aa10.04□□□□□ -0.8
SPG7-201ENST00000268704 PRR26Q8N8Z3 221 aa10.03□□□□□ -0.8
SPG7-201ENST00000268704 LINC01558Q9Y6Z2 57 aa10.03□□□□□ -0.8
SPG7-201ENST00000268704 DNAH6Q9C0G6 4158 aa10.02□□□□□ -0.81
SPG7-201ENST00000268704 ALMS1Q8TCU4 4167 aa10.01□□□□□ -0.81
SPG7-201ENST00000268704 C7orf65Q6ZTY9 151 aa10.01□□□□□ -0.81
SPG7-201ENST00000268704 PLAC8Q9NZF1 115 aa10.01□□□□□ -0.81
SPG7-201ENST00000268704 KRTAP13-3Q3SY46 172 aa9.97□□□□□ -0.81
SPG7-201ENST00000268704 RETNLBQ9BQ08 111 aa9.96□□□□□ -0.82
SPG7-201ENST00000268704 LINC00313P59037 77 aa9.95□□□□□ -0.82
SPG7-201ENST00000268704 IGLV7-43P04211 117 aa9.94□□□□□ -0.82
SPG7-201ENST00000268704 DNAH11Q96DT5 4516 aa9.93□□□□□ -0.82
SPG7-201ENST00000268704 C8orf87E5RJ46 101 aa9.9□□□□□ -0.82
SPG7-201ENST00000268704 C4orf48Q5BLP8 95 aa9.88□□□□□ -0.83
SPG7-201ENST00000268704 DNAH5Q8TE73 4624 aa9.86□□□□□ -0.83
SPG7-201ENST00000268704 C1orf134Q5TEV5 83 aa9.83□□□□□ -0.84
SPG7-201ENST00000268704 ACYP2P14621 99 aa9.82□□□□□ -0.84
SPG7-201ENST00000268704 KRTAP10-2P60368 255 aa9.79□□□□□ -0.84
SPG7-201ENST00000268704 SSBP3-AS1Q7Z2R9 100 aa9.79□□□□□ -0.84
SPG7-201ENST00000268704 LRP1BQ9NZR2 4599 aa9.78□□□□□ -0.84
SPG7-201ENST00000268704 KRTAP13-2Q52LG2 175 aa9.78□□□□□ -0.84
SPG7-201ENST00000268704 DMAC1Q96GE9 116 aa9.78□□□□□ -0.84
SPG7-201ENST00000268704 LY6G6CO95867 125 aa9.77□□□□□ -0.85
SPG7-201ENST00000268704 FAM229AH3BQW9 127 aa9.74□□□□□ -0.85
SPG7-201ENST00000268704 IGKV2-30P06310 120 aa9.72□□□□□ -0.85
SPG7-201ENST00000268704 H3BS24 57 aa9.71□□□□□ -0.85
SPG7-201ENST00000268704 IGKV2D-30A0A075B6S6 120 aa9.69□□□□□ -0.86
SPG7-201ENST00000268704 KRTAP16-1A8MUX0 517 aa9.69□□□□□ -0.86
SPG7-201ENST00000268704 A0A1B0GU69 56 aa9.68□□□□□ -0.86
SPG7-201ENST00000268704 VPS13BQ7Z7G8 4022 aa9.68□□□□□ -0.86
SPG7-201ENST00000268704 FLG2Q5D862 2391 aaPredicted RBP9.67□□□□□ -0.86
SPG7-201ENST00000268704 LINC01554Q52M75 96 aa9.67□□□□□ -0.86
SPG7-201ENST00000268704 PKD1P98161 4303 aa9.66□□□□□ -0.86
SPG7-201ENST00000268704 HYDINQ4G0P3 5121 aa9.65□□□□□ -0.86
SPG7-201ENST00000268704 KRTAP10-1P60331 282 aa9.64□□□□□ -0.87
SPG7-201ENST00000268704 CSAG1Q6PB30 78 aa9.62□□□□□ -0.87
SPG7-201ENST00000268704 FAT2Q9NYQ8 4349 aa9.61□□□□□ -0.87
SPG7-201ENST00000268704 KRTAP1-4P0C5Y4 121 aa9.61□□□□□ -0.87
SPG7-201ENST00000268704 PLA2G1BP04054 148 aaKnown RBP9.55□□□□□ -0.88
SPG7-201ENST00000268704 MIR22HGQ0VDD5 57 aa9.55□□□□□ -0.88
SPG7-201ENST00000268704 Q6ZSA8 131 aa9.54□□□□□ -0.88
SPG7-201ENST00000268704 SPINK1P00995 79 aa9.53□□□□□ -0.88
SPG7-201ENST00000268704 SPATA8Q6RVD6 105 aa9.53□□□□□ -0.88
SPG7-201ENST00000268704 Q8N1X5 172 aa9.51□□□□□ -0.89
SPG7-201ENST00000268704 UQCR11O14957 56 aa9.49□□□□□ -0.89
SPG7-201ENST00000268704 PKHD1P08F94 4074 aa9.48□□□□□ -0.89
SPG7-201ENST00000268704 TYMSOSQ8TAI1 123 aa9.48□□□□□ -0.89
SPG7-201ENST00000268704 KMT2CQ8NEZ4 4911 aaKnown RBP9.39□□□□□ -0.91
SPG7-201ENST00000268704 CRIPTQ9P021 101 aa9.38□□□□□ -0.91
SPG7-201ENST00000268704 DMBT1Q9UGM3 2413 aaPredicted RBP9.36□□□□□ -0.91
SPG7-201ENST00000268704 C9orf92A6NGG3 77 aa9.33□□□□□ -0.92
SPG7-201ENST00000268704 LINC00304Q8N9R0 145 aa9.33□□□□□ -0.92
SPG7-201ENST00000268704 SACSQ9NZJ4 4579 aa9.32□□□□□ -0.92
SPG7-201ENST00000268704 SMR3BP02814 79 aaPredicted RBP9.28□□□□□ -0.92
SPG7-201ENST00000268704 FAT1Q14517 4588 aa9.26□□□□□ -0.93
SPG7-201ENST00000268704 RYR2Q92736 4967 aa9.23□□□□□ -0.93
SPG7-201ENST00000268704 H0YAA0 97 aa9.23□□□□□ -0.93
SPG7-201ENST00000268704 KRTAP3-1Q9BYR8 98 aa9.22□□□□□ -0.93
SPG7-201ENST00000268704 RYR3Q15413 4870 aa9.21□□□□□ -0.93
SPG7-201ENST00000268704 DYNC1H1Q14204 4646 aaKnown RBP9.19□□□□□ -0.94
SPG7-201ENST00000268704 PKHD1L1Q86WI1 4243 aa9.16□□□□□ -0.94
SPG7-201ENST00000268704 RPS29P62273 56 aaKnown RBP9.15□□□□□ -0.94
SPG7-201ENST00000268704 A8MUU9 505 aa9.15□□□□□ -0.95
SPG7-201ENST00000268704 C20orf166-AS1Q96NR2 134 aa9.14□□□□□ -0.95
SPG7-201ENST00000268704 APOBP04114 4563 aaKnown RBP9.1□□□□□ -0.95
SPG7-201ENST00000268704 A0A1B0GU33 70 aa9.1□□□□□ -0.95
SPG7-201ENST00000268704 KRTAP25-1Q3LHN0 102 aa9.08□□□□□ -0.96
SPG7-201ENST00000268704 ROMO1P60602 79 aa9.07□□□□□ -0.96
SPG7-201ENST00000268704 H1FX-AS1Q4G0G2 97 aa9.05□□□□□ -0.96
SPG7-201ENST00000268704 KRTAP10-4P60372 401 aaPredicted RBP9.02□□□□□ -0.97
SPG7-201ENST00000268704 A0A1B0GVY2 172 aa8.98□□□□□ -0.97
SPG7-201ENST00000268704 COX6B2Q6YFQ2 88 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms