RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 A6NED7 52 aa9.99□□□□□ -0.81
SQLE-201ENST00000265896 V9GYY9 64 aa9.99□□□□□ -0.81
SQLE-201ENST00000265896 A0A1B0GVX0 72 aa9.99□□□□□ -0.81
SQLE-201ENST00000265896 PMAIP1Q13794 54 aa9.99□□□□□ -0.81
SQLE-201ENST00000265896 SPANXA2-OT1Q8N9U9 137 aa9.98□□□□□ -0.81
SQLE-201ENST00000265896 Q5W150 140 aa9.97□□□□□ -0.81
SQLE-201ENST00000265896 IGLV5-52A0A0A0MRZ9 124 aa9.96□□□□□ -0.81
SQLE-201ENST00000265896 IGLV7-46A0A075B6I9 117 aa9.96□□□□□ -0.82
SQLE-201ENST00000265896 NUPR2A6NF83 97 aa9.94□□□□□ -0.82
SQLE-201ENST00000265896 PRR26Q8N8Z3 221 aa9.94□□□□□ -0.82
SQLE-201ENST00000265896 MRPL34Q9BQ48 92 aaKnown RBP9.94□□□□□ -0.82
SQLE-201ENST00000265896 H3BPC8 53 aa9.94□□□□□ -0.82
SQLE-201ENST00000265896 LCA10Q71F78 164 aa9.93□□□□□ -0.82
SQLE-201ENST00000265896 ZNF861PO60384 105 aa9.93□□□□□ -0.82
SQLE-201ENST00000265896 HRES1P13985 223 aa9.92□□□□□ -0.82
SQLE-201ENST00000265896 LIMD2Q9BT23 127 aa9.9□□□□□ -0.82
SQLE-201ENST00000265896 LRP1BQ9NZR2 4599 aa9.9□□□□□ -0.82
SQLE-201ENST00000265896 LY6G6CO95867 125 aa9.89□□□□□ -0.83
SQLE-201ENST00000265896 LINC00483Q53H64 154 aa9.89□□□□□ -0.83
SQLE-201ENST00000265896 ALMS1Q8TCU4 4167 aa9.89□□□□□ -0.83
SQLE-201ENST00000265896 Q6ZR54 194 aa9.87□□□□□ -0.83
SQLE-201ENST00000265896 TP53AIP1Q9HCN2 124 aa9.87□□□□□ -0.83
SQLE-201ENST00000265896 ASB16-AS1Q495Z4 193 aa9.86□□□□□ -0.83
SQLE-201ENST00000265896 SPINK7P58062 85 aa9.85□□□□□ -0.83
SQLE-201ENST00000265896 ZNF706Q9Y5V0 76 aaPredicted RBP9.85□□□□□ -0.83
SQLE-201ENST00000265896 DNAH5Q8TE73 4624 aa9.84□□□□□ -0.83
SQLE-201ENST00000265896 SEC61GP60059 68 aa9.83□□□□□ -0.84
SQLE-201ENST00000265896 KRTAP10-2P60368 255 aa9.81□□□□□ -0.84
SQLE-201ENST00000265896 PLAC8Q9NZF1 115 aa9.81□□□□□ -0.84
SQLE-201ENST00000265896 HYDINQ4G0P3 5121 aa9.81□□□□□ -0.84
SQLE-201ENST00000265896 IGLV7-43P04211 117 aa9.81□□□□□ -0.84
SQLE-201ENST00000265896 LOC101927531A0A1B0GV80 90 aa9.79□□□□□ -0.84
SQLE-201ENST00000265896 C1orf134Q5TEV5 83 aa9.78□□□□□ -0.84
SQLE-201ENST00000265896 Q75L30 129 aa9.77□□□□□ -0.85
SQLE-201ENST00000265896 FAT2Q9NYQ8 4349 aa9.75□□□□□ -0.85
SQLE-201ENST00000265896 VPS13BQ7Z7G8 4022 aa9.71□□□□□ -0.86
SQLE-201ENST00000265896 LINC01558Q9Y6Z2 57 aa9.7□□□□□ -0.86
SQLE-201ENST00000265896 IGKV2D-30A0A075B6S6 120 aa9.69□□□□□ -0.86
SQLE-201ENST00000265896 IGKV2-30P06310 120 aa9.69□□□□□ -0.86
SQLE-201ENST00000265896 LINC00313P59037 77 aa9.69□□□□□ -0.86
SQLE-201ENST00000265896 KRTAP13-2Q52LG2 175 aa9.68□□□□□ -0.86
SQLE-201ENST00000265896 KRTAP13-3Q3SY46 172 aa9.66□□□□□ -0.86
SQLE-201ENST00000265896 CDC42SE1Q9NRR8 79 aa9.65□□□□□ -0.86
SQLE-201ENST00000265896 PKHD1P08F94 4074 aa9.64□□□□□ -0.87
SQLE-201ENST00000265896 ATP11AUNQ6ZP68 121 aa9.63□□□□□ -0.87
SQLE-201ENST00000265896 KRTAP10-1P60331 282 aa9.62□□□□□ -0.87
SQLE-201ENST00000265896 SPINK1P00995 79 aa9.61□□□□□ -0.87
SQLE-201ENST00000265896 ACYP2P14621 99 aa9.6□□□□□ -0.87
SQLE-201ENST00000265896 A6NN06 94 aa9.59□□□□□ -0.87
SQLE-201ENST00000265896 KTN1-AS1Q86SY8 53 aa9.59□□□□□ -0.87
SQLE-201ENST00000265896 PKD1P98161 4303 aa9.56□□□□□ -0.88
SQLE-201ENST00000265896 SSBP3-AS1Q7Z2R9 100 aa9.56□□□□□ -0.88
SQLE-201ENST00000265896 PRAC1Q96KF2 57 aa9.55□□□□□ -0.88
SQLE-201ENST00000265896 ADM2Q7Z4H4 148 aa9.54□□□□□ -0.88
SQLE-201ENST00000265896 RBM12B-AS1Q9P1G2 102 aa9.54□□□□□ -0.88
SQLE-201ENST00000265896 FAT1Q14517 4588 aa9.52□□□□□ -0.88
SQLE-201ENST00000265896 Q8N1X5 172 aa9.52□□□□□ -0.89
SQLE-201ENST00000265896 A0A1B0GU69 56 aa9.51□□□□□ -0.89
SQLE-201ENST00000265896 FAM229AH3BQW9 127 aa9.51□□□□□ -0.89
SQLE-201ENST00000265896 PLA2G1BP04054 148 aaKnown RBP9.51□□□□□ -0.89
SQLE-201ENST00000265896 C8orf87E5RJ46 101 aa9.5□□□□□ -0.89
SQLE-201ENST00000265896 DMAC1Q96GE9 116 aa9.5□□□□□ -0.89
SQLE-201ENST00000265896 C7orf65Q6ZTY9 151 aa9.49□□□□□ -0.89
SQLE-201ENST00000265896 SMR3BP02814 79 aaPredicted RBP9.48□□□□□ -0.89
SQLE-201ENST00000265896 KRTAP1-4P0C5Y4 121 aa9.46□□□□□ -0.9
SQLE-201ENST00000265896 KRTAP16-1A8MUX0 517 aa9.45□□□□□ -0.9
SQLE-201ENST00000265896 C4orf48Q5BLP8 95 aa9.45□□□□□ -0.9
SQLE-201ENST00000265896 TYMSOSQ8TAI1 123 aa9.43□□□□□ -0.9
SQLE-201ENST00000265896 C9orf92A6NGG3 77 aa9.42□□□□□ -0.9
SQLE-201ENST00000265896 FLG2Q5D862 2391 aaPredicted RBP9.35□□□□□ -0.91
SQLE-201ENST00000265896 MIR22HGQ0VDD5 57 aa9.33□□□□□ -0.92
SQLE-201ENST00000265896 Q6ZSA8 131 aa9.33□□□□□ -0.92
SQLE-201ENST00000265896 DYNC1H1Q14204 4646 aaKnown RBP9.29□□□□□ -0.92
SQLE-201ENST00000265896 UQCR11O14957 56 aa9.27□□□□□ -0.93
SQLE-201ENST00000265896 SACSQ9NZJ4 4579 aa9.26□□□□□ -0.93
SQLE-201ENST00000265896 DMBT1Q9UGM3 2413 aaPredicted RBP9.26□□□□□ -0.93
SQLE-201ENST00000265896 LINC00304Q8N9R0 145 aa9.24□□□□□ -0.93
SQLE-201ENST00000265896 MYCBP2O75592 4640 aa9.23□□□□□ -0.93
SQLE-201ENST00000265896 SPATA8Q6RVD6 105 aa9.22□□□□□ -0.93
SQLE-201ENST00000265896 LRP1Q07954 4544 aaKnown RBP9.17□□□□□ -0.94
SQLE-201ENST00000265896 CSAG1Q6PB30 78 aa9.12□□□□□ -0.95
SQLE-201ENST00000265896 APOBP04114 4563 aaKnown RBP9.09□□□□□ -0.95
SQLE-201ENST00000265896 KMT2CQ8NEZ4 4911 aaKnown RBP9.09□□□□□ -0.95
SQLE-201ENST00000265896 KRTAP3-1Q9BYR8 98 aa9.08□□□□□ -0.96
SQLE-201ENST00000265896 CRIPTQ9P021 101 aa9.06□□□□□ -0.96
SQLE-201ENST00000265896 H0YAA0 97 aa9.05□□□□□ -0.96
SQLE-201ENST00000265896 HSPG2P98160 4391 aa9.01□□□□□ -0.97
SQLE-201ENST00000265896 PKHD1L1Q86WI1 4243 aa8.99□□□□□ -0.97
SQLE-201ENST00000265896 LINC01554Q52M75 96 aa8.97□□□□□ -0.97
SQLE-201ENST00000265896 A0A1B0GU33 70 aa8.94□□□□□ -0.98
SQLE-201ENST00000265896 A8MUU9 505 aa8.91□□□□□ -0.98
SQLE-201ENST00000265896 C20orf166-AS1Q96NR2 134 aa8.9□□□□□ -0.98
SQLE-201ENST00000265896 FAT3Q8TDW7 4589 aa8.9□□□□□ -0.98
SQLE-201ENST00000265896 LPAP08519 4548 aa8.85□□□□□ -0.99
SQLE-201ENST00000265896 KRTAP10-4P60372 401 aaPredicted RBP8.85□□□□□ -0.99
SQLE-201ENST00000265896 RYR2Q92736 4967 aa8.85□□□□□ -0.99
SQLE-201ENST00000265896 H1FX-AS1Q4G0G2 97 aa8.85□□□□□ -0.99
SQLE-201ENST00000265896 A0A0D9SG42 100 aa8.84□□□□□ -0.99
SQLE-201ENST00000265896 COX6B2Q6YFQ2 88 aa8.79□□□□□ -1
SQLE-201ENST00000265896 RPS29P62273 56 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms