RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 LIMD2Q9BT23 127 aa11.72□□□□□ -0.53
NEIL3-201ENST00000264596 A0A087X002 238 aa11.71□□□□□ -0.53
NEIL3-201ENST00000264596 NOTCH2NLQ7Z3S9 236 aa11.71□□□□□ -0.53
NEIL3-201ENST00000264596 MEGF8Q7Z7M0 2845 aa11.7□□□□□ -0.54
NEIL3-201ENST00000264596 SPINK6Q6UWN8 80 aa11.69□□□□□ -0.54
NEIL3-201ENST00000264596 TGP01266 2768 aa11.69□□□□□ -0.54
NEIL3-201ENST00000264596 IGLV7-43P04211 117 aa11.69□□□□□ -0.54
NEIL3-201ENST00000264596 MRPL34Q9BQ48 92 aaKnown RBP11.69□□□□□ -0.54
NEIL3-201ENST00000264596 CD164Q04900 197 aa11.68□□□□□ -0.54
NEIL3-201ENST00000264596 IGLV7-46A0A075B6I9 117 aa11.67□□□□□ -0.54
NEIL3-201ENST00000264596 LY6G6CO95867 125 aa11.67□□□□□ -0.54
NEIL3-201ENST00000264596 CIRBP-AS1Q8TBR5 109 aa11.67□□□□□ -0.54
NEIL3-201ENST00000264596 CHKB-CPT1BH3BT56 60 aa11.66□□□□□ -0.54
NEIL3-201ENST00000264596 COA5Q86WW8 74 aa11.64□□□□□ -0.55
NEIL3-201ENST00000264596 PRR15LQ9BU68 103 aa11.64□□□□□ -0.55
NEIL3-201ENST00000264596 Q75L30 129 aa11.6□□□□□ -0.55
NEIL3-201ENST00000264596 LOC101927531A0A1B0GV80 90 aa11.6□□□□□ -0.55
NEIL3-201ENST00000264596 ALMS1Q8TCU4 4167 aa11.59□□□□□ -0.55
NEIL3-201ENST00000264596 DNAH6Q9C0G6 4158 aa11.59□□□□□ -0.55
NEIL3-201ENST00000264596 DNAH11Q96DT5 4516 aa11.58□□□□□ -0.56
NEIL3-201ENST00000264596 DNHD1Q96M86 4753 aa11.57□□□□□ -0.56
NEIL3-201ENST00000264596 DNAH5Q8TE73 4624 aa11.57□□□□□ -0.56
NEIL3-201ENST00000264596 LCA10Q71F78 164 aa11.57□□□□□ -0.56
NEIL3-201ENST00000264596 KRTAP10-2P60368 255 aa11.56□□□□□ -0.56
NEIL3-201ENST00000264596 KTN1-AS1Q86SY8 53 aa11.55□□□□□ -0.56
NEIL3-201ENST00000264596 ATP11AUNQ6ZP68 121 aa11.54□□□□□ -0.56
NEIL3-201ENST00000264596 Q5W150 140 aa11.52□□□□□ -0.57
NEIL3-201ENST00000264596 SSBP3-AS1Q7Z2R9 100 aa11.5□□□□□ -0.57
NEIL3-201ENST00000264596 A6NED7 52 aa11.49□□□□□ -0.57
NEIL3-201ENST00000264596 SPTSSBQ8NFR3 76 aa11.49□□□□□ -0.57
NEIL3-201ENST00000264596 A6NN06 94 aa11.46□□□□□ -0.57
NEIL3-201ENST00000264596 CDC42SE1Q9NRR8 79 aa11.46□□□□□ -0.57
NEIL3-201ENST00000264596 HRES1P13985 223 aa11.46□□□□□ -0.58
NEIL3-201ENST00000264596 LINC01558Q9Y6Z2 57 aa11.44□□□□□ -0.58
NEIL3-201ENST00000264596 KRTAP13-3Q3SY46 172 aa11.44□□□□□ -0.58
NEIL3-201ENST00000264596 SPAG11AQ6PDA7 123 aa11.44□□□□□ -0.58
NEIL3-201ENST00000264596 C8orf87E5RJ46 101 aa11.42□□□□□ -0.58
NEIL3-201ENST00000264596 KRTAP13-2Q52LG2 175 aa11.42□□□□□ -0.58
NEIL3-201ENST00000264596 KRTAP10-1P60331 282 aa11.41□□□□□ -0.58
NEIL3-201ENST00000264596 RBM12B-AS1Q9P1G2 102 aa11.41□□□□□ -0.58
NEIL3-201ENST00000264596 LRP1BQ9NZR2 4599 aa11.4□□□□□ -0.58
NEIL3-201ENST00000264596 LINC00313P59037 77 aa11.38□□□□□ -0.59
NEIL3-201ENST00000264596 RETNLBQ9BQ08 111 aa11.38□□□□□ -0.59
NEIL3-201ENST00000264596 HYDINQ4G0P3 5121 aa11.37□□□□□ -0.59
NEIL3-201ENST00000264596 PKD1P98161 4303 aa11.36□□□□□ -0.59
NEIL3-201ENST00000264596 Q6ZSA8 131 aa11.35□□□□□ -0.59
NEIL3-201ENST00000264596 FAT2Q9NYQ8 4349 aa11.31□□□□□ -0.6
NEIL3-201ENST00000264596 PRR26Q8N8Z3 221 aa11.3□□□□□ -0.6
NEIL3-201ENST00000264596 C7orf65Q6ZTY9 151 aa11.29□□□□□ -0.6
NEIL3-201ENST00000264596 FAM229AH3BQW9 127 aa11.28□□□□□ -0.6
NEIL3-201ENST00000264596 SPINK7P58062 85 aa11.28□□□□□ -0.6
NEIL3-201ENST00000264596 KRTAP1-4P0C5Y4 121 aa11.27□□□□□ -0.6
NEIL3-201ENST00000264596 ACYP2P14621 99 aa11.24□□□□□ -0.61
NEIL3-201ENST00000264596 VPS13BQ7Z7G8 4022 aa11.23□□□□□ -0.61
NEIL3-201ENST00000264596 KRTAP16-1A8MUX0 517 aa11.23□□□□□ -0.61
NEIL3-201ENST00000264596 IGKV2-30P06310 120 aa11.2□□□□□ -0.62
NEIL3-201ENST00000264596 PLA2G1BP04054 148 aaKnown RBP11.19□□□□□ -0.62
NEIL3-201ENST00000264596 DMAC1Q96GE9 116 aa11.19□□□□□ -0.62
NEIL3-201ENST00000264596 C4orf48Q5BLP8 95 aa11.17□□□□□ -0.62
NEIL3-201ENST00000264596 TYMSOSQ8TAI1 123 aa11.16□□□□□ -0.62
NEIL3-201ENST00000264596 IGKV2D-30A0A075B6S6 120 aa11.13□□□□□ -0.63
NEIL3-201ENST00000264596 SPINK1P00995 79 aa11.07□□□□□ -0.64
NEIL3-201ENST00000264596 PKHD1P08F94 4074 aa11.03□□□□□ -0.64
NEIL3-201ENST00000264596 LINC00304Q8N9R0 145 aa10.99□□□□□ -0.65
NEIL3-201ENST00000264596 A0A1B0GU69 56 aa10.98□□□□□ -0.65
NEIL3-201ENST00000264596 SMR3BP02814 79 aaPredicted RBP10.96□□□□□ -0.65
NEIL3-201ENST00000264596 SACSQ9NZJ4 4579 aa10.96□□□□□ -0.66
NEIL3-201ENST00000264596 PRAC1Q96KF2 57 aa10.93□□□□□ -0.66
NEIL3-201ENST00000264596 DYNC1H1Q14204 4646 aaKnown RBP10.91□□□□□ -0.66
NEIL3-201ENST00000264596 SPATA8Q6RVD6 105 aa10.88□□□□□ -0.67
NEIL3-201ENST00000264596 ADM2Q7Z4H4 148 aa10.87□□□□□ -0.67
NEIL3-201ENST00000264596 Q8N1X5 172 aa10.87□□□□□ -0.67
NEIL3-201ENST00000264596 RPS29P62273 56 aaKnown RBP10.86□□□□□ -0.67
NEIL3-201ENST00000264596 C9orf92A6NGG3 77 aa10.84□□□□□ -0.67
NEIL3-201ENST00000264596 FAT1Q14517 4588 aa10.83□□□□□ -0.68
NEIL3-201ENST00000264596 LINC01554Q52M75 96 aa10.76□□□□□ -0.69
NEIL3-201ENST00000264596 APOBP04114 4563 aaKnown RBP10.76□□□□□ -0.69
NEIL3-201ENST00000264596 MIR22HGQ0VDD5 57 aa10.76□□□□□ -0.69
NEIL3-201ENST00000264596 UQCR11O14957 56 aa10.75□□□□□ -0.69
NEIL3-201ENST00000264596 PKHD1L1Q86WI1 4243 aa10.73□□□□□ -0.69
NEIL3-201ENST00000264596 A0A1B0GVY2 172 aa10.73□□□□□ -0.69
NEIL3-201ENST00000264596 KRTAP10-4P60372 401 aaPredicted RBP10.72□□□□□ -0.69
NEIL3-201ENST00000264596 A8MUU9 505 aa10.7□□□□□ -0.7
NEIL3-201ENST00000264596 KRTAP21-3Q3LHN1 58 aa10.7□□□□□ -0.7
NEIL3-201ENST00000264596 C20orf166-AS1Q96NR2 134 aa10.7□□□□□ -0.7
NEIL3-201ENST00000264596 KRTAP3-1Q9BYR8 98 aa10.58□□□□□ -0.72
NEIL3-201ENST00000264596 RYR2Q92736 4967 aa10.58□□□□□ -0.72
NEIL3-201ENST00000264596 CSAG1Q6PB30 78 aa10.55□□□□□ -0.72
NEIL3-201ENST00000264596 FLG2Q5D862 2391 aaPredicted RBP10.47□□□□□ -0.73
NEIL3-201ENST00000264596 KMT2CQ8NEZ4 4911 aaKnown RBP10.46□□□□□ -0.74
NEIL3-201ENST00000264596 FAT3Q8TDW7 4589 aa10.44□□□□□ -0.74
NEIL3-201ENST00000264596 LRP1Q07954 4544 aaKnown RBP10.42□□□□□ -0.74
NEIL3-201ENST00000264596 H0YAA0 97 aa10.41□□□□□ -0.74
NEIL3-201ENST00000264596 COX6B2Q6YFQ2 88 aa10.39□□□□□ -0.75
NEIL3-201ENST00000264596 A0A1B0GU33 70 aa10.37□□□□□ -0.75
NEIL3-201ENST00000264596 TNXBP22105 4242 aa10.37□□□□□ -0.75
NEIL3-201ENST00000264596 H3BS24 57 aa10.36□□□□□ -0.75
NEIL3-201ENST00000264596 H1FX-AS1Q4G0G2 97 aa10.33□□□□□ -0.76
NEIL3-201ENST00000264596 KRTAP10-8P60410 259 aa10.31□□□□□ -0.76
NEIL3-201ENST00000264596 Q5VSD8 79 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms