RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 TENM3Q9P273 2699 aa8.14□□□□□ -1.11
TCF3-201ENST00000262965 J3QL48 77 aa8.14□□□□□ -1.11
TCF3-201ENST00000262965 CSAG1Q6PB30 78 aa8.11□□□□□ -1.11
TCF3-201ENST00000262965 SVEP1Q4LDE5 3571 aa8.11□□□□□ -1.11
TCF3-201ENST00000262965 KRTAP29-1A8MX34 341 aaPredicted RBP8.1□□□□□ -1.11
TCF3-201ENST00000262965 ZCCHC13Q8WW36 166 aaKnown RBP8.1□□□□□ -1.11
TCF3-201ENST00000262965 CELSR1Q9NYQ6 3014 aa8.09□□□□□ -1.11
TCF3-201ENST00000262965 CSMD1Q96PZ7 3565 aa8.07□□□□□ -1.12
TCF3-201ENST00000262965 A0A087X002 238 aa8.07□□□□□ -1.12
TCF3-201ENST00000262965 NOTCH2NLQ7Z3S9 236 aa8.07□□□□□ -1.12
TCF3-201ENST00000262965 KRTAP11-1Q8IUC1 163 aa8.05□□□□□ -1.12
TCF3-201ENST00000262965 MXRA5Q9NR99 2828 aa8.03□□□□□ -1.12
TCF3-201ENST00000262965 KRTAP10-2P60368 255 aa8□□□□□ -1.13
TCF3-201ENST00000262965 KRTAP7-1Q8IUC3 87 aa8□□□□□ -1.13
TCF3-201ENST00000262965 A8MU10 97 aa8□□□□□ -1.13
TCF3-201ENST00000262965 H3BS24 57 aa8□□□□□ -1.13
TCF3-201ENST00000262965 CSMD2Q7Z408 3487 aa8□□□□□ -1.13
TCF3-201ENST00000262965 Q6ZR54 194 aa7.99□□□□□ -1.13
TCF3-201ENST00000262965 Q6ZSA8 131 aa7.99□□□□□ -1.13
TCF3-201ENST00000262965 DMAC1Q96GE9 116 aa7.99□□□□□ -1.13
TCF3-201ENST00000262965 KRTAP10-1P60331 282 aa7.97□□□□□ -1.13
TCF3-201ENST00000262965 LINC00483Q53H64 154 aa7.93□□□□□ -1.14
TCF3-201ENST00000262965 TENM1Q9UKZ4 2725 aa7.93□□□□□ -1.14
TCF3-201ENST00000262965 CAMK2N1Q7Z7J9 78 aa7.92□□□□□ -1.14
TCF3-201ENST00000262965 PKD1L1Q8TDX9 2849 aa7.92□□□□□ -1.14
TCF3-201ENST00000262965 LUZP6Q538Z0 58 aa7.9□□□□□ -1.15
TCF3-201ENST00000262965 SPATA8Q6RVD6 105 aa7.89□□□□□ -1.15
TCF3-201ENST00000262965 PDZD2O15018 2839 aa7.87□□□□□ -1.15
TCF3-201ENST00000262965 NBPF19A0A087WUL8 3843 aa7.86□□□□□ -1.15
TCF3-201ENST00000262965 LCE6AA0A183 80 aa7.86□□□□□ -1.15
TCF3-201ENST00000262965 S4R3F8 94 aa7.86□□□□□ -1.15
TCF3-201ENST00000262965 VPS13CQ709C8 3753 aa7.86□□□□□ -1.15
TCF3-201ENST00000262965 RPL37P61927 97 aaKnown RBP7.83□□□□□ -1.16
TCF3-201ENST00000262965 ADM2Q7Z4H4 148 aa7.83□□□□□ -1.16
TCF3-201ENST00000262965 CUBNO60494 3623 aa7.81□□□□□ -1.16
TCF3-201ENST00000262965 H1FX-AS1Q4G0G2 97 aa7.8□□□□□ -1.16
TCF3-201ENST00000262965 R4GN34 69 aa7.79□□□□□ -1.16
TCF3-201ENST00000262965 A6NN06 94 aa7.78□□□□□ -1.16
TCF3-201ENST00000262965 VWFP04275 2813 aa7.78□□□□□ -1.16
TCF3-201ENST00000262965 Q6ZRN7 208 aaPredicted RBP7.77□□□□□ -1.17
TCF3-201ENST00000262965 OTOGQ6ZRI0 2925 aa7.76□□□□□ -1.17
TCF3-201ENST00000262965 ROMO1P60602 79 aa7.75□□□□□ -1.17
TCF3-201ENST00000262965 FBN1P35555 2871 aaKnown RBP7.74□□□□□ -1.17
TCF3-201ENST00000262965 KRTAP13-1Q8IUC0 172 aa7.72□□□□□ -1.17
TCF3-201ENST00000262965 Q5VSD8 79 aa7.7□□□□□ -1.18
TCF3-201ENST00000262965 TGP01266 2768 aa7.69□□□□□ -1.18
TCF3-201ENST00000262965 KRTAP13-2Q52LG2 175 aa7.69□□□□□ -1.18
TCF3-201ENST00000262965 SRRM2Q9UQ35 2752 aaKnown RBP7.69□□□□□ -1.18
TCF3-201ENST00000262965 KRTAP21-3Q3LHN1 58 aa7.69□□□□□ -1.18
TCF3-201ENST00000262965 M0R2T5 61 aa7.68□□□□□ -1.18
TCF3-201ENST00000262965 M0QZ58 72 aa7.67□□□□□ -1.18
TCF3-201ENST00000262965 ZFHX3Q15911 3703 aa7.67□□□□□ -1.18
TCF3-201ENST00000262965 TENM2Q9NT68 2774 aa7.63□□□□□ -1.19
TCF3-201ENST00000262965 ZNF469Q96JG9 3925 aaPredicted RBP7.63□□□□□ -1.19
TCF3-201ENST00000262965 ASB16-AS1Q495Z4 193 aa7.62□□□□□ -1.19
TCF3-201ENST00000262965 KRTAP25-1Q3LHN0 102 aa7.56□□□□□ -1.2
TCF3-201ENST00000262965 SEC61BP60468 96 aaKnown RBP7.53□□□□□ -1.2
TCF3-201ENST00000262965 ANK3Q12955 4377 aaKnown RBP7.52□□□□□ -1.2
TCF3-201ENST00000262965 A0A0A0MQY5 61 aa7.51□□□□□ -1.21
TCF3-201ENST00000262965 NDUFAF8A1L188 74 aa7.43□□□□□ -1.22
TCF3-201ENST00000262965 AKAP9Q99996 3911 aa7.42□□□□□ -1.22
TCF3-201ENST00000262965 RPS29P62273 56 aaKnown RBP7.4□□□□□ -1.22
TCF3-201ENST00000262965 A8MUU9 505 aa7.4□□□□□ -1.22
TCF3-201ENST00000262965 TRRAPQ9Y4A5 3859 aa7.38□□□□□ -1.23
TCF3-201ENST00000262965 FBN3Q75N90 2809 aa7.34□□□□□ -1.23
TCF3-201ENST00000262965 KRTAP16-1A8MUX0 517 aa7.32□□□□□ -1.24
TCF3-201ENST00000262965 KRTAP1-4P0C5Y4 121 aa7.32□□□□□ -1.24
TCF3-201ENST00000262965 C10orf95Q9H7T3 257 aa7.31□□□□□ -1.24
TCF3-201ENST00000262965 C20orf166-AS1Q96NR2 134 aa7.29□□□□□ -1.24
TCF3-201ENST00000262965 H0YAA0 97 aa7.28□□□□□ -1.24
TCF3-201ENST00000262965 COL7A1Q02388 2944 aa7.24□□□□□ -1.25
TCF3-201ENST00000262965 PLAC4Q8WY50 150 aa7.23□□□□□ -1.25
TCF3-201ENST00000262965 MEGF8Q7Z7M0 2845 aa7.17□□□□□ -1.26
TCF3-201ENST00000262965 XP32Q5T750 250 aa7.11□□□□□ -1.27
TCF3-201ENST00000262965 P0C880 135 aa7.08□□□□□ -1.28
TCF3-201ENST00000262965 KRTAP13-3Q3SY46 172 aa7.07□□□□□ -1.28
TCF3-201ENST00000262965 TNP1P09430 55 aa7.04□□□□□ -1.28
TCF3-201ENST00000262965 KRTAP10-8P60410 259 aa6.99□□□□□ -1.29
TCF3-201ENST00000262965 A0A1B0GVY2 172 aa6.97□□□□□ -1.29
TCF3-201ENST00000262965 PP632Q6XCG6 107 aa6.83□□□□□ -1.32
TCF3-201ENST00000262965 HUWE1Q7Z6Z7 4374 aaKnown RBP6.81□□□□□ -1.32
TCF3-201ENST00000262965 TPRXLQ17RH7 258 aa6.8□□□□□ -1.32
TCF3-201ENST00000262965 KRTAP12-2P59991 146 aa6.79□□□□□ -1.32
TCF3-201ENST00000262965 KRTAP3-1Q9BYR8 98 aa6.78□□□□□ -1.32
TCF3-201ENST00000262965 ANK2Q01484 3957 aa6.73□□□□□ -1.33
TCF3-201ENST00000262965 DNAH9Q9NYC9 4486 aa6.7□□□□□ -1.34
TCF3-201ENST00000262965 CMYA5Q8N3K9 4069 aa6.67□□□□□ -1.34
TCF3-201ENST00000262965 CSMD3Q7Z407 3707 aa6.67□□□□□ -1.34
TCF3-201ENST00000262965 DNHD1Q96M86 4753 aa6.66□□□□□ -1.34
TCF3-201ENST00000262965 KRTAP12-1P59990 96 aa6.66□□□□□ -1.34
TCF3-201ENST00000262965 KRTAP10-10P60014 251 aa6.66□□□□□ -1.34
TCF3-201ENST00000262965 KRTAP13-4Q3LI77 160 aa6.64□□□□□ -1.35
TCF3-201ENST00000262965 DNAH3Q8TD57 4116 aa6.59□□□□□ -1.35
TCF3-201ENST00000262965 KRTAP10-6P60371 365 aaPredicted RBP6.57□□□□□ -1.36
TCF3-201ENST00000262965 PRKDCP78527 4128 aaKnown RBP6.57□□□□□ -1.36
TCF3-201ENST00000262965 PLECQ15149 4684 aaKnown RBP6.57□□□□□ -1.36
TCF3-201ENST00000262965 DNAH10Q8IVF4 4471 aa6.5□□□□□ -1.37
TCF3-201ENST00000262965 STARD9Q9P2P6 4700 aa6.49□□□□□ -1.37
TCF3-201ENST00000262965 LYSTQ99698 3801 aa6.45□□□□□ -1.38
TCF3-201ENST00000262965 DNAH1Q9P2D7 4330 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms