RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 HRES1P13985 223 aa9.62□□□□□ -0.87
SNCAIP-202ENST00000261368 LINC00483Q53H64 154 aa9.6□□□□□ -0.87
SNCAIP-202ENST00000261368 IGLV7-43P04211 117 aa9.59□□□□□ -0.87
SNCAIP-202ENST00000261368 Q5W150 140 aa9.58□□□□□ -0.88
SNCAIP-202ENST00000261368 Q6ZR54 194 aa9.58□□□□□ -0.88
SNCAIP-202ENST00000261368 LCA10Q71F78 164 aa9.58□□□□□ -0.88
SNCAIP-202ENST00000261368 FBN3Q75N90 2809 aa9.57□□□□□ -0.88
SNCAIP-202ENST00000261368 DNAH1Q9P2D7 4330 aa9.57□□□□□ -0.88
SNCAIP-202ENST00000261368 Q75L30 129 aa9.57□□□□□ -0.88
SNCAIP-202ENST00000261368 PLAC8Q9NZF1 115 aa9.56□□□□□ -0.88
SNCAIP-202ENST00000261368 LINC00313P59037 77 aa9.55□□□□□ -0.88
SNCAIP-202ENST00000261368 SPINK7P58062 85 aa9.54□□□□□ -0.88
SNCAIP-202ENST00000261368 MEGF8Q7Z7M0 2845 aa9.53□□□□□ -0.88
SNCAIP-202ENST00000261368 IGKV2D-30A0A075B6S6 120 aa9.53□□□□□ -0.88
SNCAIP-202ENST00000261368 IGKV2-30P06310 120 aa9.53□□□□□ -0.88
SNCAIP-202ENST00000261368 DNAH3Q8TD57 4116 aa9.52□□□□□ -0.89
SNCAIP-202ENST00000261368 ACYP2P14621 99 aa9.52□□□□□ -0.89
SNCAIP-202ENST00000261368 ATP11AUNQ6ZP68 121 aa9.51□□□□□ -0.89
SNCAIP-202ENST00000261368 PLECQ15149 4684 aaKnown RBP9.51□□□□□ -0.89
SNCAIP-202ENST00000261368 LINC01558Q9Y6Z2 57 aa9.51□□□□□ -0.89
SNCAIP-202ENST00000261368 ASB16-AS1Q495Z4 193 aa9.49□□□□□ -0.89
SNCAIP-202ENST00000261368 CDC42SE1Q9NRR8 79 aa9.49□□□□□ -0.89
SNCAIP-202ENST00000261368 C4orf48Q5BLP8 95 aa9.48□□□□□ -0.89
SNCAIP-202ENST00000261368 DNAH7Q8WXX0 4024 aa9.48□□□□□ -0.89
SNCAIP-202ENST00000261368 SSBP3-AS1Q7Z2R9 100 aa9.45□□□□□ -0.9
SNCAIP-202ENST00000261368 SPINK1P00995 79 aa9.44□□□□□ -0.9
SNCAIP-202ENST00000261368 KTN1-AS1Q86SY8 53 aa9.44□□□□□ -0.9
SNCAIP-202ENST00000261368 C8orf87E5RJ46 101 aa9.43□□□□□ -0.9
SNCAIP-202ENST00000261368 FAM229AH3BQW9 127 aa9.43□□□□□ -0.9
SNCAIP-202ENST00000261368 KRTAP10-2P60368 255 aa9.43□□□□□ -0.9
SNCAIP-202ENST00000261368 A0A1B0GU69 56 aa9.42□□□□□ -0.9
SNCAIP-202ENST00000261368 C7orf65Q6ZTY9 151 aa9.37□□□□□ -0.91
SNCAIP-202ENST00000261368 PLA2G1BP04054 148 aaKnown RBP9.33□□□□□ -0.92
SNCAIP-202ENST00000261368 RBM12B-AS1Q9P1G2 102 aa9.32□□□□□ -0.92
SNCAIP-202ENST00000261368 FRAS1Q86XX4 4008 aa9.31□□□□□ -0.92
SNCAIP-202ENST00000261368 STARD9Q9P2P6 4700 aa9.31□□□□□ -0.92
SNCAIP-202ENST00000261368 KRTAP13-2Q52LG2 175 aa9.3□□□□□ -0.92
SNCAIP-202ENST00000261368 TYMSOSQ8TAI1 123 aa9.3□□□□□ -0.92
SNCAIP-202ENST00000261368 A6NN06 94 aa9.3□□□□□ -0.92
SNCAIP-202ENST00000261368 KRTAP10-1P60331 282 aa9.29□□□□□ -0.92
SNCAIP-202ENST00000261368 DMAC1Q96GE9 116 aa9.28□□□□□ -0.92
SNCAIP-202ENST00000261368 Q8N1X5 172 aa9.27□□□□□ -0.93
SNCAIP-202ENST00000261368 DNAH8Q96JB1 4490 aa9.26□□□□□ -0.93
SNCAIP-202ENST00000261368 PRAC1Q96KF2 57 aa9.25□□□□□ -0.93
SNCAIP-202ENST00000261368 KMT2AQ03164 3969 aa9.25□□□□□ -0.93
SNCAIP-202ENST00000261368 KRTAP13-3Q3SY46 172 aa9.24□□□□□ -0.93
SNCAIP-202ENST00000261368 MIR22HGQ0VDD5 57 aa9.21□□□□□ -0.93
SNCAIP-202ENST00000261368 UQCR11O14957 56 aa9.19□□□□□ -0.94
SNCAIP-202ENST00000261368 SMR3BP02814 79 aaPredicted RBP9.19□□□□□ -0.94
SNCAIP-202ENST00000261368 PRKDCP78527 4128 aaKnown RBP9.18□□□□□ -0.94
SNCAIP-202ENST00000261368 VPS13DQ5THJ4 4388 aa9.18□□□□□ -0.94
SNCAIP-202ENST00000261368 C9orf92A6NGG3 77 aa9.17□□□□□ -0.94
SNCAIP-202ENST00000261368 DNAH17Q9UFH2 4485 aa9.15□□□□□ -0.94
SNCAIP-202ENST00000261368 ADM2Q7Z4H4 148 aa9.14□□□□□ -0.95
SNCAIP-202ENST00000261368 HECTD4Q9Y4D8 3996 aa9.13□□□□□ -0.95
SNCAIP-202ENST00000261368 DNAH11Q96DT5 4516 aa9.12□□□□□ -0.95
SNCAIP-202ENST00000261368 LINC00304Q8N9R0 145 aa9.11□□□□□ -0.95
SNCAIP-202ENST00000261368 DNAH2Q9P225 4427 aa9.09□□□□□ -0.95
SNCAIP-202ENST00000261368 KRTAP16-1A8MUX0 517 aa9.08□□□□□ -0.96
SNCAIP-202ENST00000261368 KRTAP1-4P0C5Y4 121 aa9.08□□□□□ -0.96
SNCAIP-202ENST00000261368 DYNC2H1Q8NCM8 4307 aaKnown RBP9.07□□□□□ -0.96
SNCAIP-202ENST00000261368 DNAH6Q9C0G6 4158 aa9.04□□□□□ -0.96
SNCAIP-202ENST00000261368 SPATA8Q6RVD6 105 aa9.01□□□□□ -0.97
SNCAIP-202ENST00000261368 Q6ZSA8 131 aa9.01□□□□□ -0.97
SNCAIP-202ENST00000261368 DMBT1Q9UGM3 2413 aaPredicted RBP8.98□□□□□ -0.97
SNCAIP-202ENST00000261368 FLG2Q5D862 2391 aaPredicted RBP8.97□□□□□ -0.97
SNCAIP-202ENST00000261368 LRP1BQ9NZR2 4599 aa8.97□□□□□ -0.97
SNCAIP-202ENST00000261368 DNHD1Q96M86 4753 aa8.92□□□□□ -0.98
SNCAIP-202ENST00000261368 CSAG1Q6PB30 78 aa8.9□□□□□ -0.98
SNCAIP-202ENST00000261368 DNAH5Q8TE73 4624 aa8.87□□□□□ -0.99
SNCAIP-202ENST00000261368 ALMS1Q8TCU4 4167 aa8.86□□□□□ -0.99
SNCAIP-202ENST00000261368 LINC01554Q52M75 96 aa8.84□□□□□ -0.99
SNCAIP-202ENST00000261368 A0A1B0GU33 70 aa8.82□□□□□ -1
SNCAIP-202ENST00000261368 VPS13BQ7Z7G8 4022 aa8.79□□□□□ -1
SNCAIP-202ENST00000261368 K7ERS5 55 aa8.76□□□□□ -1.01
SNCAIP-202ENST00000261368 CRIPTQ9P021 101 aa8.76□□□□□ -1.01
SNCAIP-202ENST00000261368 HYDINQ4G0P3 5121 aa8.74□□□□□ -1.01
SNCAIP-202ENST00000261368 H0YAA0 97 aa8.71□□□□□ -1.01
SNCAIP-202ENST00000261368 A8MUU9 505 aa8.68□□□□□ -1.02
SNCAIP-202ENST00000261368 H1FX-AS1Q4G0G2 97 aa8.68□□□□□ -1.02
SNCAIP-202ENST00000261368 C20orf166-AS1Q96NR2 134 aa8.67□□□□□ -1.02
SNCAIP-202ENST00000261368 A0A0D9SG42 100 aa8.67□□□□□ -1.02
SNCAIP-202ENST00000261368 RPS29P62273 56 aaKnown RBP8.67□□□□□ -1.02
SNCAIP-202ENST00000261368 FAT1Q14517 4588 aa8.65□□□□□ -1.02
SNCAIP-202ENST00000261368 KRTAP3-1Q9BYR8 98 aa8.65□□□□□ -1.03
SNCAIP-202ENST00000261368 COX6B2Q6YFQ2 88 aa8.61□□□□□ -1.03
SNCAIP-202ENST00000261368 PKHD1P08F94 4074 aa8.61□□□□□ -1.03
SNCAIP-202ENST00000261368 FAT2Q9NYQ8 4349 aa8.56□□□□□ -1.04
SNCAIP-202ENST00000261368 PKD1P98161 4303 aa8.56□□□□□ -1.04
SNCAIP-202ENST00000261368 DYNC1H1Q14204 4646 aaKnown RBP8.5□□□□□ -1.05
SNCAIP-202ENST00000261368 KRTAP25-1Q3LHN0 102 aa8.48□□□□□ -1.05
SNCAIP-202ENST00000261368 S4R3F8 94 aa8.42□□□□□ -1.06
SNCAIP-202ENST00000261368 Q5VSD8 79 aa8.41□□□□□ -1.06
SNCAIP-202ENST00000261368 A0A1B0GVY2 172 aa8.4□□□□□ -1.06
SNCAIP-202ENST00000261368 RPL37P61927 97 aaKnown RBP8.4□□□□□ -1.06
SNCAIP-202ENST00000261368 SACSQ9NZJ4 4579 aa8.4□□□□□ -1.07
SNCAIP-202ENST00000261368 H3BS24 57 aa8.39□□□□□ -1.07
SNCAIP-202ENST00000261368 KRTAP10-4P60372 401 aaPredicted RBP8.38□□□□□ -1.07
SNCAIP-202ENST00000261368 SPINT4Q6UDR6 99 aa8.36□□□□□ -1.07
SNCAIP-202ENST00000261368 ROMO1P60602 79 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms