RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 NISCHQ9Y2I1 1504 aa31.59■■■□□ 2.65
SNCAIP-202ENST00000261368 SHROOM4Q9ULL8 1493 aa28.28■■■□□ 2.12
SNCAIP-202ENST00000261368 SUPT5HO00267 1087 aaKnown RBP28.01■■■□□ 2.07
SNCAIP-202ENST00000261368 DCAF8L2P0C7V8 631 aa27.69■■■□□ 2.02
SNCAIP-202ENST00000261368 CHIC1Q5VXU3 224 aa26.78■■□□□ 1.88
SNCAIP-202ENST00000261368 PCGF6Q9BYE7 350 aa26.75■■□□□ 1.87
SNCAIP-202ENST00000261368 ZCCHC6Q5VYS8 1495 aaKnown RBP26.64■■□□□ 1.86
SNCAIP-202ENST00000261368 HRCP23327 699 aa26.51■■□□□ 1.83
SNCAIP-202ENST00000261368 MYO15BQ96JP2 1530 aa26.48■■□□□ 1.83
SNCAIP-202ENST00000261368 LOC105371045A0A1W2PR82 267 aa26.37■■□□□ 1.81
SNCAIP-202ENST00000261368 PPARGC1BQ86YN6 1023 aaKnown RBP26.29■■□□□ 1.8
SNCAIP-202ENST00000261368 CCDC180Q9P1Z9 1646 aa26.24■■□□□ 1.79
SNCAIP-202ENST00000261368 EHMT2Q96KQ7 1210 aa26.19■■□□□ 1.78
SNCAIP-202ENST00000261368 FAM9AQ8IZU1 332 aaPredicted RBP26.05■■□□□ 1.76
SNCAIP-202ENST00000261368 TRIM41Q8WV44 630 aa25.83■■□□□ 1.72
SNCAIP-202ENST00000261368 TRIM26Q12899 539 aaPredicted RBP25.79■■□□□ 1.72
SNCAIP-202ENST00000261368 DCAF1Q9Y4B6 1507 aa25.62■■□□□ 1.69
SNCAIP-202ENST00000261368 SCRIBQ14160 1630 aa25.41■■□□□ 1.66
SNCAIP-202ENST00000261368 TTBK1Q5TCY1 1321 aaPredicted RBP25.35■■□□□ 1.65
SNCAIP-202ENST00000261368 ZEB1P37275 1124 aaPredicted RBP25.33■■□□□ 1.65
SNCAIP-202ENST00000261368 RSF1Q96T23 1441 aaPredicted RBP25.3■■□□□ 1.64
SNCAIP-202ENST00000261368 ABCC9O60706 1549 aa25.14■■□□□ 1.62
SNCAIP-202ENST00000261368 CCER1Q8TC90 406 aaPredicted RBP25.08■■□□□ 1.61
SNCAIP-202ENST00000261368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.05■■□□□ 1.6
SNCAIP-202ENST00000261368 RB1CC1Q8TDY2 1594 aa25.04■■□□□ 1.6
SNCAIP-202ENST00000261368 CECR2Q9BXF3 1484 aa24.92■■□□□ 1.58
SNCAIP-202ENST00000261368 UBTFP17480 764 aaKnown RBP24.77■■□□□ 1.56
SNCAIP-202ENST00000261368 MROH2BQ7Z745 1585 aa24.72■■□□□ 1.55
SNCAIP-202ENST00000261368 SCAF1Q9H7N4 1312 aaKnown RBP24.71■■□□□ 1.55
SNCAIP-202ENST00000261368 RANGAP1P46060 587 aaPredicted RBP24.65■■□□□ 1.54
SNCAIP-202ENST00000261368 WIZO95785 1651 aa24.57■■□□□ 1.52
SNCAIP-202ENST00000261368 DIEXFQ68CQ4 756 aaKnown RBP24.56■■□□□ 1.52
SNCAIP-202ENST00000261368 NACADO15069 1562 aa24.5■■□□□ 1.51
SNCAIP-202ENST00000261368 PELP1Q8IZL8 1130 aaKnown RBP24.48■■□□□ 1.51
SNCAIP-202ENST00000261368 YTHDC1Q96MU7 727 aaKnown RBP24.48■■□□□ 1.51
SNCAIP-202ENST00000261368 CENPBP07199 599 aaPredicted RBP24.47■■□□□ 1.51
SNCAIP-202ENST00000261368 PABPN1Q86U42 306 aaKnown RBP eCLIP24.46■■□□□ 1.51
SNCAIP-202ENST00000261368 HNRNPUL2Q1KMD3 747 aaKnown RBP24.45■■□□□ 1.5
SNCAIP-202ENST00000261368 NEUROD1Q13562 356 aa24.41■■□□□ 1.5
SNCAIP-202ENST00000261368 ACIN1Q9UKV3 1341 aaKnown RBP24.39■■□□□ 1.49
SNCAIP-202ENST00000261368 APLP2Q06481 763 aa24.37■■□□□ 1.49
SNCAIP-202ENST00000261368 CSRNP3Q8WYN3 585 aa24.37■■□□□ 1.49
SNCAIP-202ENST00000261368 ABCC8Q09428 1581 aa24.37■■□□□ 1.49
SNCAIP-202ENST00000261368 GTF3C3Q9Y5Q9 886 aa24.35■■□□□ 1.49
SNCAIP-202ENST00000261368 CCDC88BA6NC98 1476 aa24.31■■□□□ 1.48
SNCAIP-202ENST00000261368 CEP162Q5TB80 1403 aa24.3■■□□□ 1.48
SNCAIP-202ENST00000261368 SOGA1O94964 1423 aa24.29■■□□□ 1.48
SNCAIP-202ENST00000261368 BAZ1AQ9NRL2 1556 aaPredicted RBP24.25■■□□□ 1.47
SNCAIP-202ENST00000261368 ZNF316A6NFI3 1004 aaPredicted RBP24.15■■□□□ 1.46
SNCAIP-202ENST00000261368 RUSC2Q8N2Y8 1516 aa24.1■■□□□ 1.45
SNCAIP-202ENST00000261368 TNIKQ9UKE5 1360 aa24.09■■□□□ 1.45
SNCAIP-202ENST00000261368 TOP2AP11388 1531 aaKnown RBP24.02■■□□□ 1.44
SNCAIP-202ENST00000261368 GOLGA3Q08378 1498 aa23.94■■□□□ 1.42
SNCAIP-202ENST00000261368 WRNQ14191 1432 aaPredicted RBP eCLIP23.93■■□□□ 1.42
SNCAIP-202ENST00000261368 MIER1Q8N108 512 aa23.93■■□□□ 1.42
SNCAIP-202ENST00000261368 SMARCA4P51532 1647 aa23.93■■□□□ 1.42
SNCAIP-202ENST00000261368 SMARCA2P51531 1590 aa23.92■■□□□ 1.42
SNCAIP-202ENST00000261368 ITGAEP38570 1179 aa23.9■■□□□ 1.42
SNCAIP-202ENST00000261368 EEA1Q15075 1411 aa23.89■■□□□ 1.42
SNCAIP-202ENST00000261368 CLIP1P30622 1438 aa23.87■■□□□ 1.41
SNCAIP-202ENST00000261368 EIF4G1Q04637 1599 aaKnown RBP23.8■■□□□ 1.4
SNCAIP-202ENST00000261368 CEP164Q9UPV0 1460 aa23.73■■□□□ 1.39
SNCAIP-202ENST00000261368 ATP1B4Q9UN42 357 aaPredicted RBP23.66■■□□□ 1.38
SNCAIP-202ENST00000261368 VPS8Q8N3P4 1428 aa23.6■■□□□ 1.37
SNCAIP-202ENST00000261368 RAPGEF2Q9Y4G8 1499 aa23.6■■□□□ 1.37
SNCAIP-202ENST00000261368 BAZ1BQ9UIG0 1483 aaKnown RBP23.58■■□□□ 1.36
SNCAIP-202ENST00000261368 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
SNCAIP-202ENST00000261368 KANK4Q5T7N3 995 aaPredicted RBP23.51■■□□□ 1.35
SNCAIP-202ENST00000261368 UNC13AQ9UPW8 1703 aa23.46■■□□□ 1.35
SNCAIP-202ENST00000261368 ATAD2BQ9ULI0 1458 aa23.43■■□□□ 1.34
SNCAIP-202ENST00000261368 FAM50AQ14320 339 aaKnown RBP23.39■■□□□ 1.33
SNCAIP-202ENST00000261368 P3H3Q8IVL6 736 aa23.38■■□□□ 1.33
SNCAIP-202ENST00000261368 KIF21BO75037 1637 aa23.32■■□□□ 1.32
SNCAIP-202ENST00000261368 BICRAQ9NZM4 1560 aa23.31■■□□□ 1.32
SNCAIP-202ENST00000261368 BCANQ96GW7 911 aa23.3■■□□□ 1.32
SNCAIP-202ENST00000261368 DHX57Q6P158 1386 aaKnown RBP23.29■■□□□ 1.32
SNCAIP-202ENST00000261368 MYT1Q01538 1121 aa23.28■■□□□ 1.32
SNCAIP-202ENST00000261368 HIRIP3Q9BW71 556 aaPredicted RBP23.22■■□□□ 1.31
SNCAIP-202ENST00000261368 KIF27Q86VH2 1401 aa23.2■■□□□ 1.3
SNCAIP-202ENST00000261368 DDX10Q13206 875 aaKnown RBP23.2■■□□□ 1.3
SNCAIP-202ENST00000261368 CLSPNQ9HAW4 1339 aa23.18■■□□□ 1.3
SNCAIP-202ENST00000261368 CCNB3Q8WWL7 1395 aa23.17■■□□□ 1.3
SNCAIP-202ENST00000261368 SUPT16HQ9Y5B9 1047 aaKnown RBP23.17■■□□□ 1.3
SNCAIP-202ENST00000261368 KCNH8Q96L42 1107 aa23.15■■□□□ 1.3
SNCAIP-202ENST00000261368 SIN3AQ96ST3 1273 aa23.14■■□□□ 1.3
SNCAIP-202ENST00000261368 ARAP1Q96P48 1450 aa23.12■■□□□ 1.29
SNCAIP-202ENST00000261368 PEG3Q9GZU2 1588 aa23.08■■□□□ 1.29
SNCAIP-202ENST00000261368 TOP2BQ02880 1626 aa23.05■■□□□ 1.28
SNCAIP-202ENST00000261368 NEFLP07196 543 aa23.05■■□□□ 1.28
SNCAIP-202ENST00000261368 RAB3GAP2Q9H2M9 1393 aa23.05■■□□□ 1.28
SNCAIP-202ENST00000261368 PRXQ9BXM0 1461 aa23.03■■□□□ 1.28
SNCAIP-202ENST00000261368 CUX2O14529 1486 aa23.01■■□□□ 1.27
SNCAIP-202ENST00000261368 FKBP8Q14318 412 aa23.01■■□□□ 1.27
SNCAIP-202ENST00000261368 TRIM52Q96A61 297 aa22.99■■□□□ 1.27
SNCAIP-202ENST00000261368 CUX1P39880 1505 aa22.94■■□□□ 1.26
SNCAIP-202ENST00000261368 ERICH3Q5RHP9 1530 aa22.93■■□□□ 1.26
SNCAIP-202ENST00000261368 CARMIL1Q5VZK9 1371 aa22.93■■□□□ 1.26
SNCAIP-202ENST00000261368 ARHGAP35Q9NRY4 1499 aa22.92■■□□□ 1.26
SNCAIP-202ENST00000261368 ANP32CO43423 234 aa22.92■■□□□ 1.26
SNCAIP-202ENST00000261368 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms