RNA–Protein interactions for RNA: ENST00000260302.7

MMP13-201, Transcript of matrix metallopeptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP13, Length 2,716 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13-201ENST00000260302 KRTAP10-3P60369 221 aa3.3□□□□□ -1.88
MMP13-201ENST00000260302 SPACA4Q8TDM5 124 aa3.3□□□□□ -1.88
MMP13-201ENST00000260302 PRO2289Q9P1D8 64 aa3.3□□□□□ -1.88
MMP13-201ENST00000260302 CSPG4Q6UVK1 2322 aa3.29□□□□□ -1.88
MMP13-201ENST00000260302 ZFYVE26Q68DK2 2539 aa3.29□□□□□ -1.88
MMP13-201ENST00000260302 KRTAP24-1Q3LI83 254 aa3.28□□□□□ -1.88
MMP13-201ENST00000260302 LORP23490 312 aaPredicted RBP3.28□□□□□ -1.88
MMP13-201ENST00000260302 TENM4Q6N022 2769 aa3.28□□□□□ -1.88
MMP13-201ENST00000260302 UTP20O75691 2785 aaKnown RBP3.27□□□□□ -1.89
MMP13-201ENST00000260302 TEX15Q9BXT5 2789 aa3.27□□□□□ -1.89
MMP13-201ENST00000260302 TLN2Q9Y4G6 2542 aa3.27□□□□□ -1.89
MMP13-201ENST00000260302 KRTAP1-3Q8IUG1 177 aa3.27□□□□□ -1.89
MMP13-201ENST00000260302 TLN1Q9Y490 2541 aaKnown RBP3.26□□□□□ -1.89
MMP13-201ENST00000260302 MAST4O15021 2626 aa3.25□□□□□ -1.89
MMP13-201ENST00000260302 PTPN13Q12923 2485 aa3.25□□□□□ -1.89
MMP13-201ENST00000260302 ZNF462Q96JM2 2506 aa3.25□□□□□ -1.89
MMP13-201ENST00000260302 C10orf95Q9H7T3 257 aa3.25□□□□□ -1.89
MMP13-201ENST00000260302 CFAP46Q8IYW2 2715 aa3.25□□□□□ -1.89
MMP13-201ENST00000260302 CUBNO60494 3623 aa3.24□□□□□ -1.89
MMP13-201ENST00000260302 JMJD1CQ15652 2540 aa3.24□□□□□ -1.89
MMP13-201ENST00000260302 MXRA5Q9NR99 2828 aa3.23□□□□□ -1.89
MMP13-201ENST00000260302 FLNBO75369 2602 aaKnown RBP3.22□□□□□ -1.89
MMP13-201ENST00000260302 FLG2Q5D862 2391 aaPredicted RBP3.22□□□□□ -1.89
MMP13-201ENST00000260302 HIVEP3Q5T1R4 2406 aa3.22□□□□□ -1.89
MMP13-201ENST00000260302 TRRAPQ9Y4A5 3859 aa3.21□□□□□ -1.89
MMP13-201ENST00000260302 KRTAP10-8P60410 259 aa3.21□□□□□ -1.89
MMP13-201ENST00000260302 KRTAP4-5Q9BYR2 181 aa3.21□□□□□ -1.9
MMP13-201ENST00000260302 NBEAL2Q6ZNJ1 2754 aa3.2□□□□□ -1.9
MMP13-201ENST00000260302 KRTAP1-1Q07627 177 aa3.2□□□□□ -1.9
MMP13-201ENST00000260302 FRAS1Q86XX4 4008 aa3.2□□□□□ -1.9
MMP13-201ENST00000260302 KRTAP1-5Q9BYS1 174 aa3.19□□□□□ -1.9
MMP13-201ENST00000260302 CSMD3Q7Z407 3707 aa3.19□□□□□ -1.9
MMP13-201ENST00000260302 VPS13DQ5THJ4 4388 aa3.18□□□□□ -1.9
MMP13-201ENST00000260302 NAV2Q8IVL1 2488 aa3.17□□□□□ -1.9
MMP13-201ENST00000260302 KRTAP10-9P60411 292 aa3.17□□□□□ -1.9
MMP13-201ENST00000260302 KRTAP10-6P60371 365 aaPredicted RBP3.16□□□□□ -1.9
MMP13-201ENST00000260302 S4R3F8 94 aa3.16□□□□□ -1.9
MMP13-201ENST00000260302 ANK2Q01484 3957 aa3.16□□□□□ -1.9
MMP13-201ENST00000260302 UNC79Q9P2D8 2635 aa3.16□□□□□ -1.9
MMP13-201ENST00000260302 DNAH8Q96JB1 4490 aa3.16□□□□□ -1.9
MMP13-201ENST00000260302 F8P00451 2351 aa3.15□□□□□ -1.9
MMP13-201ENST00000260302 HECTD1Q9ULT8 2610 aa3.15□□□□□ -1.9
MMP13-201ENST00000260302 KRTAP13-4Q3LI77 160 aa3.15□□□□□ -1.91
MMP13-201ENST00000260302 HIVEP2P31629 2446 aa3.15□□□□□ -1.91
MMP13-201ENST00000260302 NIPBLQ6KC79 2804 aaeCLIP3.15□□□□□ -1.91
MMP13-201ENST00000260302 USP9YO00507 2555 aaPredicted RBP3.14□□□□□ -1.91
MMP13-201ENST00000260302 SRRM2Q9UQ35 2752 aaKnown RBP3.14□□□□□ -1.91
MMP13-201ENST00000260302 PLAC4Q8WY50 150 aa3.14□□□□□ -1.91
MMP13-201ENST00000260302 FBN1P35555 2871 aaKnown RBP3.14□□□□□ -1.91
MMP13-201ENST00000260302 USP9XQ93008 2570 aaPredicted RBP3.14□□□□□ -1.91
MMP13-201ENST00000260302 FBN2P35556 2912 aa3.13□□□□□ -1.91
MMP13-201ENST00000260302 DOPEY1Q5JWR5 2465 aa3.13□□□□□ -1.91
MMP13-201ENST00000260302 MYO9AB2RTY4 2548 aa3.12□□□□□ -1.91
MMP13-201ENST00000260302 PDZD2O15018 2839 aa3.12□□□□□ -1.91
MMP13-201ENST00000260302 LYSTQ99698 3801 aa3.11□□□□□ -1.91
MMP13-201ENST00000260302 KRTAP10-11P60412 298 aa3.11□□□□□ -1.91
MMP13-201ENST00000260302 APLNQ9ULZ1 77 aa3.11□□□□□ -1.91
MMP13-201ENST00000260302 DNAH10Q8IVF4 4471 aa3.11□□□□□ -1.91
MMP13-201ENST00000260302 Q6ZRN7 208 aaPredicted RBP3.11□□□□□ -1.91
MMP13-201ENST00000260302 ZANQ9Y493 2812 aa3.11□□□□□ -1.91
MMP13-201ENST00000260302 ABCA12Q86UK0 2595 aa3.1□□□□□ -1.91
MMP13-201ENST00000260302 HIVEP1P15822 2718 aa3.1□□□□□ -1.91
MMP13-201ENST00000260302 A0A0D9SG42 100 aa3.1□□□□□ -1.91
MMP13-201ENST00000260302 KRTAP12-2P59991 146 aa3.09□□□□□ -1.91
MMP13-201ENST00000260302 KRTAP13-2Q52LG2 175 aa3.09□□□□□ -1.91
MMP13-201ENST00000260302 FLNCQ14315 2725 aa3.09□□□□□ -1.91
MMP13-201ENST00000260302 DNAH9Q9NYC9 4486 aa3.08□□□□□ -1.92
MMP13-201ENST00000260302 FBN3Q75N90 2809 aa3.08□□□□□ -1.92
MMP13-201ENST00000260302 LRRK2Q5S007 2527 aa3.08□□□□□ -1.92
MMP13-201ENST00000260302 MEGF8Q7Z7M0 2845 aa3.07□□□□□ -1.92
MMP13-201ENST00000260302 DNAH3Q8TD57 4116 aa3.07□□□□□ -1.92
MMP13-201ENST00000260302 KRTAP12-1P59990 96 aa3.07□□□□□ -1.92
MMP13-201ENST00000260302 DNAH17Q9UFH2 4485 aa3.07□□□□□ -1.92
MMP13-201ENST00000260302 RPS29P62273 56 aaKnown RBP3.06□□□□□ -1.92
MMP13-201ENST00000260302 UBE2DNLQ8IWF7 75 aa3.06□□□□□ -1.92
MMP13-201ENST00000260302 VWFP04275 2813 aa3.06□□□□□ -1.92
MMP13-201ENST00000260302 MTORP42345 2549 aa3.06□□□□□ -1.92
MMP13-201ENST00000260302 ITPR2Q14571 2701 aa3.06□□□□□ -1.92
MMP13-201ENST00000260302 DYNC2H1Q8NCM8 4307 aaKnown RBP3.05□□□□□ -1.92
MMP13-201ENST00000260302 TEP1Q99973 2627 aaKnown RBP3.05□□□□□ -1.92
MMP13-201ENST00000260302 SONP18583 2426 aaKnown RBP3.04□□□□□ -1.92
MMP13-201ENST00000260302 PRKDCP78527 4128 aaKnown RBP3.03□□□□□ -1.92
MMP13-201ENST00000260302 KRTAP4-8Q9BYQ9 185 aa3.02□□□□□ -1.93
MMP13-201ENST00000260302 ZNF469Q96JG9 3925 aaPredicted RBP3.02□□□□□ -1.93
MMP13-201ENST00000260302 DNAH7Q8WXX0 4024 aa3.02□□□□□ -1.93
MMP13-201ENST00000260302 CENPEQ02224 2701 aa3.02□□□□□ -1.93
MMP13-201ENST00000260302 POLQO75417 2590 aa3.01□□□□□ -1.93
MMP13-201ENST00000260302 DNHD1Q96M86 4753 aa3.01□□□□□ -1.93
MMP13-201ENST00000260302 CCDC168Q8NDH2 2452 aa3□□□□□ -1.93
MMP13-201ENST00000260302 PKD1L1Q8TDX9 2849 aa2.99□□□□□ -1.93
MMP13-201ENST00000260302 M0QZ58 72 aa2.99□□□□□ -1.93
MMP13-201ENST00000260302 KRTAP1-4P0C5Y4 121 aa2.99□□□□□ -1.93
MMP13-201ENST00000260302 NOTCH2Q04721 2471 aa2.98□□□□□ -1.93
MMP13-201ENST00000260302 PP632Q6XCG6 107 aa2.98□□□□□ -1.93
MMP13-201ENST00000260302 DNAH6Q9C0G6 4158 aa2.97□□□□□ -1.93
MMP13-201ENST00000260302 SETD2Q9BYW2 2564 aaPredicted RBP2.97□□□□□ -1.93
MMP13-201ENST00000260302 INE1O15225 51 aa2.97□□□□□ -1.93
MMP13-201ENST00000260302 HUWE1Q7Z6Z7 4374 aaKnown RBP2.95□□□□□ -1.94
MMP13-201ENST00000260302 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
MMP13-201ENST00000260302 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms