RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 UQCR11O14957 56 aa3.7□□□□□ -1.82
BRIP1-201ENST00000259008 Q8N9P0 234 aaPredicted RBP3.7□□□□□ -1.82
BRIP1-201ENST00000259008 NBEAL1Q6ZS30 2694 aa3.7□□□□□ -1.82
BRIP1-201ENST00000259008 MIR22HGQ0VDD5 57 aa3.7□□□□□ -1.82
BRIP1-201ENST00000259008 Q5W150 140 aa3.69□□□□□ -1.82
BRIP1-201ENST00000259008 NBEAL2Q6ZNJ1 2754 aa3.69□□□□□ -1.82
BRIP1-201ENST00000259008 CRIPTQ9P021 101 aa3.68□□□□□ -1.82
BRIP1-201ENST00000259008 R4GN34 69 aa3.68□□□□□ -1.82
BRIP1-201ENST00000259008 A8MUN3 132 aa3.67□□□□□ -1.82
BRIP1-201ENST00000259008 LINC00472Q9H8W2 130 aa3.67□□□□□ -1.82
BRIP1-201ENST00000259008 LCA10Q71F78 164 aa3.67□□□□□ -1.82
BRIP1-201ENST00000259008 CYP4F30PQ9H0H9 118 aa3.66□□□□□ -1.82
BRIP1-201ENST00000259008 TENM1Q9UKZ4 2725 aa3.66□□□□□ -1.82
BRIP1-201ENST00000259008 KRTAP13-2Q52LG2 175 aa3.65□□□□□ -1.83
BRIP1-201ENST00000259008 ANK3Q12955 4377 aaKnown RBP3.64□□□□□ -1.83
BRIP1-201ENST00000259008 PLAC4Q8WY50 150 aa3.64□□□□□ -1.83
BRIP1-201ENST00000259008 KRTAP4-16G5E9R7 235 aaPredicted RBP3.63□□□□□ -1.83
BRIP1-201ENST00000259008 KRTAP7-1Q8IUC3 87 aa3.63□□□□□ -1.83
BRIP1-201ENST00000259008 M0QZ58 72 aa3.63□□□□□ -1.83
BRIP1-201ENST00000259008 NSD1Q96L73 2696 aaPredicted RBP3.62□□□□□ -1.83
BRIP1-201ENST00000259008 A0A1B0GU33 70 aa3.62□□□□□ -1.83
BRIP1-201ENST00000259008 ADM2Q7Z4H4 148 aa3.62□□□□□ -1.83
BRIP1-201ENST00000259008 CDC42SE1Q9NRR8 79 aa3.62□□□□□ -1.83
BRIP1-201ENST00000259008 PKD1L1Q8TDX9 2849 aa3.61□□□□□ -1.83
BRIP1-201ENST00000259008 C20orf166-AS1Q96NR2 134 aa3.61□□□□□ -1.83
BRIP1-201ENST00000259008 OCR1Q9BZK8 76 aa3.6□□□□□ -1.83
BRIP1-201ENST00000259008 KLKP1Q107X0 134 aa3.6□□□□□ -1.83
BRIP1-201ENST00000259008 SPANXA2-OT1Q8N9U9 137 aa3.6□□□□□ -1.83
BRIP1-201ENST00000259008 RPS29P62273 56 aaKnown RBP3.59□□□□□ -1.83
BRIP1-201ENST00000259008 STAB2Q8WWQ8 2551 aa3.59□□□□□ -1.83
BRIP1-201ENST00000259008 NOTCH2NLQ7Z3S9 236 aa3.59□□□□□ -1.83
BRIP1-201ENST00000259008 RPL37P61927 97 aaKnown RBP3.58□□□□□ -1.84
BRIP1-201ENST00000259008 H7BZZ5 65 aa3.58□□□□□ -1.84
BRIP1-201ENST00000259008 ANK2Q01484 3957 aa3.57□□□□□ -1.84
BRIP1-201ENST00000259008 H1FX-AS1Q4G0G2 97 aa3.57□□□□□ -1.84
BRIP1-201ENST00000259008 A0A1B0GVY2 172 aa3.57□□□□□ -1.84
BRIP1-201ENST00000259008 Q75L30 129 aa3.56□□□□□ -1.84
BRIP1-201ENST00000259008 KRTAP13-1Q8IUC0 172 aa3.55□□□□□ -1.84
BRIP1-201ENST00000259008 TRRAPQ9Y4A5 3859 aa3.55□□□□□ -1.84
BRIP1-201ENST00000259008 DMAC1Q96GE9 116 aa3.53□□□□□ -1.84
BRIP1-201ENST00000259008 RPS28P62857 69 aaKnown RBP3.51□□□□□ -1.85
BRIP1-201ENST00000259008 ASB16-AS1Q495Z4 193 aa3.5□□□□□ -1.85
BRIP1-201ENST00000259008 KRTAP29-1A8MX34 341 aaPredicted RBP3.5□□□□□ -1.85
BRIP1-201ENST00000259008 XP32Q5T750 250 aa3.5□□□□□ -1.85
BRIP1-201ENST00000259008 A8MUU9 505 aa3.5□□□□□ -1.85
BRIP1-201ENST00000259008 KRTAP1-4P0C5Y4 121 aa3.49□□□□□ -1.85
BRIP1-201ENST00000259008 TENM2Q9NT68 2774 aa3.49□□□□□ -1.85
BRIP1-201ENST00000259008 DNAH3Q8TD57 4116 aa3.49□□□□□ -1.85
BRIP1-201ENST00000259008 SPATA8Q6RVD6 105 aa3.49□□□□□ -1.85
BRIP1-201ENST00000259008 PRO0628Q9UI54 55 aa3.48□□□□□ -1.85
BRIP1-201ENST00000259008 COL7A1Q02388 2944 aa3.48□□□□□ -1.85
BRIP1-201ENST00000259008 FBN1P35555 2871 aaKnown RBP3.47□□□□□ -1.85
BRIP1-201ENST00000259008 FLG2Q5D862 2391 aaPredicted RBP3.47□□□□□ -1.85
BRIP1-201ENST00000259008 CMYA5Q8N3K9 4069 aa3.47□□□□□ -1.85
BRIP1-201ENST00000259008 DMBT1Q9UGM3 2413 aaPredicted RBP3.47□□□□□ -1.85
BRIP1-201ENST00000259008 Q1T7F1 81 aa3.47□□□□□ -1.85
BRIP1-201ENST00000259008 Q5XG85 94 aa3.46□□□□□ -1.86
BRIP1-201ENST00000259008 TPRXLQ17RH7 258 aa3.45□□□□□ -1.86
BRIP1-201ENST00000259008 CYSTM1Q9H1C7 97 aa3.45□□□□□ -1.86
BRIP1-201ENST00000259008 KRTAP10-10P60014 251 aa3.44□□□□□ -1.86
BRIP1-201ENST00000259008 TENM3Q9P273 2699 aa3.42□□□□□ -1.86
BRIP1-201ENST00000259008 LINC01558Q9Y6Z2 57 aa3.41□□□□□ -1.86
BRIP1-201ENST00000259008 LUZP6Q538Z0 58 aa3.39□□□□□ -1.87
BRIP1-201ENST00000259008 KRTAP13-3Q3SY46 172 aa3.38□□□□□ -1.87
BRIP1-201ENST00000259008 CSMD3Q7Z407 3707 aa3.38□□□□□ -1.87
BRIP1-201ENST00000259008 DNHD1Q96M86 4753 aa3.38□□□□□ -1.87
BRIP1-201ENST00000259008 KRTAP10-8P60410 259 aa3.37□□□□□ -1.87
BRIP1-201ENST00000259008 A8MU10 97 aa3.35□□□□□ -1.87
BRIP1-201ENST00000259008 ROMO1P60602 79 aa3.35□□□□□ -1.87
BRIP1-201ENST00000259008 KTN1-AS1Q86SY8 53 aa3.32□□□□□ -1.88
BRIP1-201ENST00000259008 Q5VV11 94 aa3.32□□□□□ -1.88
BRIP1-201ENST00000259008 LYSTQ99698 3801 aa3.31□□□□□ -1.88
BRIP1-201ENST00000259008 KRTAP4-5Q9BYR2 181 aa3.3□□□□□ -1.88
BRIP1-201ENST00000259008 DNAH1Q9P2D7 4330 aa3.3□□□□□ -1.88
BRIP1-201ENST00000259008 PRAC1Q96KF2 57 aa3.29□□□□□ -1.88
BRIP1-201ENST00000259008 HUWE1Q7Z6Z7 4374 aaKnown RBP3.28□□□□□ -1.88
BRIP1-201ENST00000259008 MEGF8Q7Z7M0 2845 aa3.27□□□□□ -1.89
BRIP1-201ENST00000259008 TNP1P09430 55 aa3.27□□□□□ -1.89
BRIP1-201ENST00000259008 DNAH7Q8WXX0 4024 aa3.27□□□□□ -1.89
BRIP1-201ENST00000259008 ALMS1Q8TCU4 4167 aa3.27□□□□□ -1.89
BRIP1-201ENST00000259008 DYNC2H1Q8NCM8 4307 aaKnown RBP3.27□□□□□ -1.89
BRIP1-201ENST00000259008 PRKDCP78527 4128 aaKnown RBP3.26□□□□□ -1.89
BRIP1-201ENST00000259008 DNAH9Q9NYC9 4486 aa3.26□□□□□ -1.89
BRIP1-201ENST00000259008 PRO2289Q9P1D8 64 aa3.25□□□□□ -1.89
BRIP1-201ENST00000259008 H3BS24 57 aa3.25□□□□□ -1.89
BRIP1-201ENST00000259008 FBN3Q75N90 2809 aa3.24□□□□□ -1.89
BRIP1-201ENST00000259008 KRTAP16-1A8MUX0 517 aa3.24□□□□□ -1.89
BRIP1-201ENST00000259008 PLECQ15149 4684 aaKnown RBP3.22□□□□□ -1.89
BRIP1-201ENST00000259008 DNAH10Q8IVF4 4471 aa3.21□□□□□ -1.89
BRIP1-201ENST00000259008 STARD9Q9P2P6 4700 aa3.21□□□□□ -1.9
BRIP1-201ENST00000259008 SRRM2Q9UQ35 2752 aaKnown RBP3.2□□□□□ -1.9
BRIP1-201ENST00000259008 TGP01266 2768 aa3.18□□□□□ -1.9
BRIP1-201ENST00000259008 MT1HL1P0DM35 61 aa3.16□□□□□ -1.9
BRIP1-201ENST00000259008 VPS13DQ5THJ4 4388 aa3.16□□□□□ -1.9
BRIP1-201ENST00000259008 DNAH2Q9P225 4427 aa3.14□□□□□ -1.91
BRIP1-201ENST00000259008 P0C880 135 aa3.14□□□□□ -1.91
BRIP1-201ENST00000259008 HECTD4Q9Y4D8 3996 aa3.13□□□□□ -1.91
BRIP1-201ENST00000259008 C10orf95Q9H7T3 257 aa3.13□□□□□ -1.91
BRIP1-201ENST00000259008 KMT2AQ03164 3969 aa3.13□□□□□ -1.91
BRIP1-201ENST00000259008 HYDINQ4G0P3 5121 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms