RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 MRPL34Q9BQ48 92 aaKnown RBP9.04□□□□□ -0.96
DDX56-201ENST00000258772 A0A087X002 238 aa9.03□□□□□ -0.96
DDX56-201ENST00000258772 NOTCH2NLQ7Z3S9 236 aa9.03□□□□□ -0.96
DDX56-201ENST00000258772 Q8N9P0 234 aaPredicted RBP9.03□□□□□ -0.96
DDX56-201ENST00000258772 IGLV7-43P04211 117 aa9.02□□□□□ -0.97
DDX56-201ENST00000258772 C1orf134Q5TEV5 83 aa9.02□□□□□ -0.97
DDX56-201ENST00000258772 COA5Q86WW8 74 aa9□□□□□ -0.97
DDX56-201ENST00000258772 LIMD2Q9BT23 127 aa8.99□□□□□ -0.97
DDX56-201ENST00000258772 TGP01266 2768 aa8.99□□□□□ -0.97
DDX56-201ENST00000258772 Q5VV11 94 aa8.98□□□□□ -0.97
DDX56-201ENST00000258772 FBN3Q75N90 2809 aa8.97□□□□□ -0.97
DDX56-201ENST00000258772 SPINK6Q6UWN8 80 aa8.97□□□□□ -0.97
DDX56-201ENST00000258772 CIRBP-AS1Q8TBR5 109 aa8.96□□□□□ -0.98
DDX56-201ENST00000258772 MEGF8Q7Z7M0 2845 aa8.95□□□□□ -0.98
DDX56-201ENST00000258772 RBM12B-AS1Q9P1G2 102 aa8.94□□□□□ -0.98
DDX56-201ENST00000258772 SSBP3-AS1Q7Z2R9 100 aa8.92□□□□□ -0.98
DDX56-201ENST00000258772 PRR15LQ9BU68 103 aa8.92□□□□□ -0.98
DDX56-201ENST00000258772 ALMS1Q8TCU4 4167 aa8.92□□□□□ -0.98
DDX56-201ENST00000258772 LY6G6CO95867 125 aa8.91□□□□□ -0.98
DDX56-201ENST00000258772 A0A0A0MQY5 61 aa8.91□□□□□ -0.98
DDX56-201ENST00000258772 Q5W150 140 aa8.9□□□□□ -0.98
DDX56-201ENST00000258772 CHKB-CPT1BH3BT56 60 aa8.89□□□□□ -0.99
DDX56-201ENST00000258772 DNAH6Q9C0G6 4158 aa8.89□□□□□ -0.99
DDX56-201ENST00000258772 LOC101927531A0A1B0GV80 90 aa8.88□□□□□ -0.99
DDX56-201ENST00000258772 C8orf87E5RJ46 101 aa8.88□□□□□ -0.99
DDX56-201ENST00000258772 KRTAP13-3Q3SY46 172 aa8.88□□□□□ -0.99
DDX56-201ENST00000258772 HRES1P13985 223 aa8.87□□□□□ -0.99
DDX56-201ENST00000258772 KRTAP10-2P60368 255 aa8.87□□□□□ -0.99
DDX56-201ENST00000258772 DNAH11Q96DT5 4516 aa8.86□□□□□ -0.99
DDX56-201ENST00000258772 A8MU10 97 aa8.86□□□□□ -0.99
DDX56-201ENST00000258772 Q75L30 129 aa8.85□□□□□ -0.99
DDX56-201ENST00000258772 DNAH5Q8TE73 4624 aa8.84□□□□□ -0.99
DDX56-201ENST00000258772 SPAG11AQ6PDA7 123 aa8.83□□□□□ -1
DDX56-201ENST00000258772 LINC01558Q9Y6Z2 57 aa8.83□□□□□ -1
DDX56-201ENST00000258772 KRTAP13-2Q52LG2 175 aa8.8□□□□□ -1
DDX56-201ENST00000258772 LINC00313P59037 77 aa8.8□□□□□ -1
DDX56-201ENST00000258772 A6NED7 52 aa8.77□□□□□ -1
DDX56-201ENST00000258772 Q6ZSA8 131 aa8.77□□□□□ -1.01
DDX56-201ENST00000258772 LCA10Q71F78 164 aa8.76□□□□□ -1.01
DDX56-201ENST00000258772 KRTAP10-1P60331 282 aa8.76□□□□□ -1.01
DDX56-201ENST00000258772 FAM229AH3BQW9 127 aa8.74□□□□□ -1.01
DDX56-201ENST00000258772 ACYP2P14621 99 aa8.72□□□□□ -1.01
DDX56-201ENST00000258772 KTN1-AS1Q86SY8 53 aa8.72□□□□□ -1.01
DDX56-201ENST00000258772 PKD1P98161 4303 aa8.71□□□□□ -1.02
DDX56-201ENST00000258772 LRP1BQ9NZR2 4599 aa8.71□□□□□ -1.02
DDX56-201ENST00000258772 RETNLBQ9BQ08 111 aa8.7□□□□□ -1.02
DDX56-201ENST00000258772 DNHD1Q96M86 4753 aa8.7□□□□□ -1.02
DDX56-201ENST00000258772 KRTAP1-4P0C5Y4 121 aa8.7□□□□□ -1.02
DDX56-201ENST00000258772 ATP11AUNQ6ZP68 121 aa8.69□□□□□ -1.02
DDX56-201ENST00000258772 CDC42SE1Q9NRR8 79 aa8.69□□□□□ -1.02
DDX56-201ENST00000258772 KRTAP16-1A8MUX0 517 aa8.68□□□□□ -1.02
DDX56-201ENST00000258772 DMAC1Q96GE9 116 aa8.68□□□□□ -1.02
DDX56-201ENST00000258772 SPTSSBQ8NFR3 76 aa8.68□□□□□ -1.02
DDX56-201ENST00000258772 IGKV2-30P06310 120 aa8.67□□□□□ -1.02
DDX56-201ENST00000258772 FAT2Q9NYQ8 4349 aa8.65□□□□□ -1.02
DDX56-201ENST00000258772 VPS13BQ7Z7G8 4022 aa8.65□□□□□ -1.02
DDX56-201ENST00000258772 SPINK7P58062 85 aa8.65□□□□□ -1.03
DDX56-201ENST00000258772 HYDINQ4G0P3 5121 aa8.63□□□□□ -1.03
DDX56-201ENST00000258772 PLA2G1BP04054 148 aaKnown RBP8.61□□□□□ -1.03
DDX56-201ENST00000258772 KRTAP21-3Q3LHN1 58 aa8.6□□□□□ -1.03
DDX56-201ENST00000258772 TYMSOSQ8TAI1 123 aa8.58□□□□□ -1.04
DDX56-201ENST00000258772 SPINK1P00995 79 aa8.56□□□□□ -1.04
DDX56-201ENST00000258772 IGKV2D-30A0A075B6S6 120 aa8.55□□□□□ -1.04
DDX56-201ENST00000258772 A6NN06 94 aa8.55□□□□□ -1.04
DDX56-201ENST00000258772 A0A1B0GU69 56 aa8.48□□□□□ -1.05
DDX56-201ENST00000258772 C7orf65Q6ZTY9 151 aa8.46□□□□□ -1.05
DDX56-201ENST00000258772 LINC00304Q8N9R0 145 aa8.46□□□□□ -1.06
DDX56-201ENST00000258772 RPS29P62273 56 aaKnown RBP8.44□□□□□ -1.06
DDX56-201ENST00000258772 PKHD1P08F94 4074 aa8.42□□□□□ -1.06
DDX56-201ENST00000258772 SACSQ9NZJ4 4579 aa8.39□□□□□ -1.07
DDX56-201ENST00000258772 SPATA8Q6RVD6 105 aa8.38□□□□□ -1.07
DDX56-201ENST00000258772 SMR3BP02814 79 aaPredicted RBP8.37□□□□□ -1.07
DDX56-201ENST00000258772 J3QL48 77 aa8.36□□□□□ -1.07
DDX56-201ENST00000258772 Q8N1X5 172 aa8.35□□□□□ -1.07
DDX56-201ENST00000258772 UQCR11O14957 56 aa8.35□□□□□ -1.07
DDX56-201ENST00000258772 MIR22HGQ0VDD5 57 aa8.32□□□□□ -1.08
DDX56-201ENST00000258772 C9orf92A6NGG3 77 aa8.3□□□□□ -1.08
DDX56-201ENST00000258772 A8MUU9 505 aa8.29□□□□□ -1.08
DDX56-201ENST00000258772 DYNC1H1Q14204 4646 aaKnown RBP8.29□□□□□ -1.08
DDX56-201ENST00000258772 C20orf166-AS1Q96NR2 134 aa8.29□□□□□ -1.08
DDX56-201ENST00000258772 KRTAP10-4P60372 401 aaPredicted RBP8.28□□□□□ -1.08
DDX56-201ENST00000258772 LINC01554Q52M75 96 aa8.28□□□□□ -1.08
DDX56-201ENST00000258772 PKHD1L1Q86WI1 4243 aa8.27□□□□□ -1.09
DDX56-201ENST00000258772 A0A1B0GVY2 172 aa8.25□□□□□ -1.09
DDX56-201ENST00000258772 FAT1Q14517 4588 aa8.23□□□□□ -1.09
DDX56-201ENST00000258772 APOBP04114 4563 aaKnown RBP8.23□□□□□ -1.09
DDX56-201ENST00000258772 KRTAP3-1Q9BYR8 98 aa8.19□□□□□ -1.1
DDX56-201ENST00000258772 PRAC1Q96KF2 57 aa8.15□□□□□ -1.1
DDX56-201ENST00000258772 ADM2Q7Z4H4 148 aa8.15□□□□□ -1.1
DDX56-201ENST00000258772 FLG2Q5D862 2391 aaPredicted RBP8.11□□□□□ -1.11
DDX56-201ENST00000258772 H0YAA0 97 aa8.06□□□□□ -1.12
DDX56-201ENST00000258772 COX6B2Q6YFQ2 88 aa8.04□□□□□ -1.12
DDX56-201ENST00000258772 A0A1B0GU33 70 aa8.03□□□□□ -1.12
DDX56-201ENST00000258772 H1FX-AS1Q4G0G2 97 aa8□□□□□ -1.13
DDX56-201ENST00000258772 RYR2Q92736 4967 aa7.99□□□□□ -1.13
DDX56-201ENST00000258772 TNXBP22105 4242 aa7.97□□□□□ -1.13
DDX56-201ENST00000258772 FAT3Q8TDW7 4589 aa7.97□□□□□ -1.13
DDX56-201ENST00000258772 KRTAP10-8P60410 259 aa7.97□□□□□ -1.13
DDX56-201ENST00000258772 SEC61BP60468 96 aaKnown RBP7.95□□□□□ -1.14
DDX56-201ENST00000258772 LRP1Q07954 4544 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms