RNA–Protein interactions for RNA: ENST00000256646.6

NOTCH2-201, Transcript of notch 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH2, Length 11,389 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-201ENST00000256646 KRTAP4-16G5E9R7 235 aaPredicted RBP5.62□□□□□ -1.51
NOTCH2-201ENST00000256646 NDUFAF8A1L188 74 aa5.62□□□□□ -1.51
NOTCH2-201ENST00000256646 KRTAP29-1A8MX34 341 aaPredicted RBP5.61□□□□□ -1.51
NOTCH2-201ENST00000256646 COL12A1Q99715 3063 aa5.6□□□□□ -1.51
NOTCH2-201ENST00000256646 FRYLO94915 3013 aa5.6□□□□□ -1.51
NOTCH2-201ENST00000256646 KRTAP25-1Q3LHN0 102 aa5.6□□□□□ -1.51
NOTCH2-201ENST00000256646 HIVEP1P15822 2718 aa5.59□□□□□ -1.51
NOTCH2-201ENST00000256646 FLNCQ14315 2725 aa5.59□□□□□ -1.52
NOTCH2-201ENST00000256646 USP34Q70CQ2 3546 aa5.58□□□□□ -1.52
NOTCH2-201ENST00000256646 BOD1L1Q8NFC6 3051 aa5.58□□□□□ -1.52
NOTCH2-201ENST00000256646 SPTBN5Q9NRC6 3674 aaKnown RBP5.57□□□□□ -1.52
NOTCH2-201ENST00000256646 KRTAP13-2Q52LG2 175 aa5.56□□□□□ -1.52
NOTCH2-201ENST00000256646 ATMQ13315 3056 aa5.55□□□□□ -1.52
NOTCH2-201ENST00000256646 TACC2O95359 2948 aa5.53□□□□□ -1.52
NOTCH2-201ENST00000256646 WDFY3Q8IZQ1 3526 aa5.53□□□□□ -1.52
NOTCH2-201ENST00000256646 ZZEF1O43149 2961 aa5.53□□□□□ -1.52
NOTCH2-201ENST00000256646 KRTAP7-1Q8IUC3 87 aa5.52□□□□□ -1.53
NOTCH2-201ENST00000256646 NIPBLQ6KC79 2804 aaeCLIP5.52□□□□□ -1.53
NOTCH2-201ENST00000256646 TENM1Q9UKZ4 2725 aa5.51□□□□□ -1.53
NOTCH2-201ENST00000256646 ADGRG4Q8IZF6 3080 aa5.5□□□□□ -1.53
NOTCH2-201ENST00000256646 KRTAP10-8P60410 259 aa5.5□□□□□ -1.53
NOTCH2-201ENST00000256646 TNP1P09430 55 aa5.49□□□□□ -1.53
NOTCH2-201ENST00000256646 A6NN06 94 aa5.49□□□□□ -1.53
NOTCH2-201ENST00000256646 NBEAQ8NFP9 2946 aa5.49□□□□□ -1.53
NOTCH2-201ENST00000256646 TENM3Q9P273 2699 aa5.49□□□□□ -1.53
NOTCH2-201ENST00000256646 Q6ZRN7 208 aaPredicted RBP5.47□□□□□ -1.53
NOTCH2-201ENST00000256646 MYO15AQ9UKN7 3530 aa5.45□□□□□ -1.54
NOTCH2-201ENST00000256646 NF1P21359 2839 aa5.45□□□□□ -1.54
NOTCH2-201ENST00000256646 ASPMQ8IZT6 3477 aa5.44□□□□□ -1.54
NOTCH2-201ENST00000256646 CELSR2Q9HCU4 2923 aa5.43□□□□□ -1.54
NOTCH2-201ENST00000256646 EYSQ5T1H1 3165 aa5.41□□□□□ -1.54
NOTCH2-201ENST00000256646 PP632Q6XCG6 107 aa5.4□□□□□ -1.54
NOTCH2-201ENST00000256646 LOC400499M0QZD8 3231 aa5.39□□□□□ -1.55
NOTCH2-201ENST00000256646 DMXL1Q9Y485 3027 aa5.37□□□□□ -1.55
NOTCH2-201ENST00000256646 TNRC18O15417 2968 aaPredicted RBP5.37□□□□□ -1.55
NOTCH2-201ENST00000256646 NBPF19A0A087WUL8 3843 aa5.36□□□□□ -1.55
NOTCH2-201ENST00000256646 KRTAP13-1Q8IUC0 172 aa5.34□□□□□ -1.55
NOTCH2-201ENST00000256646 KRTAP10-10P60014 251 aa5.34□□□□□ -1.56
NOTCH2-201ENST00000256646 LAMA5O15230 3695 aa5.33□□□□□ -1.56
NOTCH2-201ENST00000256646 DCHS1Q96JQ0 3298 aa5.32□□□□□ -1.56
NOTCH2-201ENST00000256646 XP32Q5T750 250 aa5.28□□□□□ -1.56
NOTCH2-201ENST00000256646 CELSR1Q9NYQ6 3014 aa5.28□□□□□ -1.56
NOTCH2-201ENST00000256646 DCHS2Q6V1P9 2916 aa5.27□□□□□ -1.57
NOTCH2-201ENST00000256646 ZFHX4Q86UP3 3567 aa5.27□□□□□ -1.57
NOTCH2-201ENST00000256646 CSMD1Q96PZ7 3565 aa5.26□□□□□ -1.57
NOTCH2-201ENST00000256646 H0YAA0 97 aa5.24□□□□□ -1.57
NOTCH2-201ENST00000256646 KRTAP21-3Q3LHN1 58 aa5.23□□□□□ -1.57
NOTCH2-201ENST00000256646 FBN2P35556 2912 aa5.22□□□□□ -1.57
NOTCH2-201ENST00000256646 TGP01266 2768 aa5.19□□□□□ -1.58
NOTCH2-201ENST00000256646 TENM4Q6N022 2769 aa5.17□□□□□ -1.58
NOTCH2-201ENST00000256646 P0C880 135 aa5.17□□□□□ -1.58
NOTCH2-201ENST00000256646 PDZD2O15018 2839 aa5.16□□□□□ -1.58
NOTCH2-201ENST00000256646 PRO2289Q9P1D8 64 aa5.16□□□□□ -1.58
NOTCH2-201ENST00000256646 KRTAP1-4P0C5Y4 121 aa5.15□□□□□ -1.59
NOTCH2-201ENST00000256646 ZANQ9Y493 2812 aa5.14□□□□□ -1.59
NOTCH2-201ENST00000256646 SPENQ96T58 3664 aaKnown RBP5.12□□□□□ -1.59
NOTCH2-201ENST00000256646 SMG1Q96Q15 3661 aaKnown RBP5.12□□□□□ -1.59
NOTCH2-201ENST00000256646 VWFP04275 2813 aa5.1□□□□□ -1.59
NOTCH2-201ENST00000256646 HRNRQ86YZ3 2850 aaPredicted RBP5.09□□□□□ -1.59
NOTCH2-201ENST00000256646 PKD1L1Q8TDX9 2849 aa5.08□□□□□ -1.6
NOTCH2-201ENST00000256646 TENM2Q9NT68 2774 aa5.07□□□□□ -1.6
NOTCH2-201ENST00000256646 RELNP78509 3460 aa5.07□□□□□ -1.6
NOTCH2-201ENST00000256646 TPRXLQ17RH7 258 aa5.04□□□□□ -1.6
NOTCH2-201ENST00000256646 MXRA5Q9NR99 2828 aa5.02□□□□□ -1.61
NOTCH2-201ENST00000256646 DMDP11532 3685 aa5.01□□□□□ -1.61
NOTCH2-201ENST00000256646 KRTAP13-3Q3SY46 172 aa5.01□□□□□ -1.61
NOTCH2-201ENST00000256646 KRTAP12-2P59991 146 aa5.01□□□□□ -1.61
NOTCH2-201ENST00000256646 ZFHX3Q15911 3703 aa4.98□□□□□ -1.61
NOTCH2-201ENST00000256646 CUBNO60494 3623 aa4.9□□□□□ -1.62
NOTCH2-201ENST00000256646 SVEP1Q4LDE5 3571 aa4.9□□□□□ -1.63
NOTCH2-201ENST00000256646 CRCT1Q9UGL9 99 aa4.89□□□□□ -1.63
NOTCH2-201ENST00000256646 SRRM2Q9UQ35 2752 aaKnown RBP4.87□□□□□ -1.63
NOTCH2-201ENST00000256646 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
NOTCH2-201ENST00000256646 VPS13CQ709C8 3753 aa4.83□□□□□ -1.64
NOTCH2-201ENST00000256646 COL7A1Q02388 2944 aa4.81□□□□□ -1.64
NOTCH2-201ENST00000256646 KRTAP12-1P59990 96 aa4.79□□□□□ -1.64
NOTCH2-201ENST00000256646 KRTAP13-4Q3LI77 160 aa4.79□□□□□ -1.64
NOTCH2-201ENST00000256646 TRRAPQ9Y4A5 3859 aa4.74□□□□□ -1.65
NOTCH2-201ENST00000256646 MEGF8Q7Z7M0 2845 aa4.73□□□□□ -1.65
NOTCH2-201ENST00000256646 CSMD3Q7Z407 3707 aa4.71□□□□□ -1.66
NOTCH2-201ENST00000256646 CSMD2Q7Z408 3487 aa4.69□□□□□ -1.66
NOTCH2-201ENST00000256646 FBN3Q75N90 2809 aa4.67□□□□□ -1.66
NOTCH2-201ENST00000256646 MUC3AQ02505 3323 aa4.67□□□□□ -1.66
NOTCH2-201ENST00000256646 KRTAP3-1Q9BYR8 98 aa4.66□□□□□ -1.66
NOTCH2-201ENST00000256646 FBN1P35555 2871 aaKnown RBP4.65□□□□□ -1.67
NOTCH2-201ENST00000256646 INE1O15225 51 aa4.59□□□□□ -1.68
NOTCH2-201ENST00000256646 BSNQ9UPA5 3926 aa4.58□□□□□ -1.68
NOTCH2-201ENST00000256646 ANK3Q12955 4377 aaKnown RBP4.58□□□□□ -1.68
NOTCH2-201ENST00000256646 AKAP9Q99996 3911 aa4.54□□□□□ -1.68
NOTCH2-201ENST00000256646 KRTAP10-6P60371 365 aaPredicted RBP4.51□□□□□ -1.69
NOTCH2-201ENST00000256646 KRTAP10-12P60413 245 aa4.5□□□□□ -1.69
NOTCH2-201ENST00000256646 OTOGQ6ZRI0 2925 aa4.5□□□□□ -1.69
NOTCH2-201ENST00000256646 KRTAP4-5Q9BYR2 181 aa4.47□□□□□ -1.69
NOTCH2-201ENST00000256646 HUWE1Q7Z6Z7 4374 aaKnown RBP4.44□□□□□ -1.7
NOTCH2-201ENST00000256646 KRTAP23-1A1A580 65 aa4.42□□□□□ -1.7
NOTCH2-201ENST00000256646 ALMS1Q8TCU4 4167 aa4.37□□□□□ -1.71
NOTCH2-201ENST00000256646 LCE3AQ5TA76 89 aa4.37□□□□□ -1.71
NOTCH2-201ENST00000256646 KRTAP10-5P60370 271 aa4.35□□□□□ -1.71
NOTCH2-201ENST00000256646 MT1HL1P0DM35 61 aa4.35□□□□□ -1.71
NOTCH2-201ENST00000256646 KRTAP3-3Q9BYR6 98 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms