RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 FBN3Q75N90 2809 aa10.15□□□□□ -0.78
SLC52A1-201ENST00000254853 DNAH17Q9UFH2 4485 aa10.14□□□□□ -0.79
SLC52A1-201ENST00000254853 A8MU10 97 aa10.14□□□□□ -0.79
SLC52A1-201ENST00000254853 FRAS1Q86XX4 4008 aa10.13□□□□□ -0.79
SLC52A1-201ENST00000254853 CHKB-CPT1BH3BT56 60 aa10.12□□□□□ -0.79
SLC52A1-201ENST00000254853 DNAH2Q9P225 4427 aa10.12□□□□□ -0.79
SLC52A1-201ENST00000254853 SPINK6Q6UWN8 80 aa10.09□□□□□ -0.79
SLC52A1-201ENST00000254853 PRKDCP78527 4128 aaKnown RBP10.08□□□□□ -0.8
SLC52A1-201ENST00000254853 KMT2AQ03164 3969 aa10.06□□□□□ -0.8
SLC52A1-201ENST00000254853 IGLV7-43P04211 117 aa10.06□□□□□ -0.8
SLC52A1-201ENST00000254853 LOC101927531A0A1B0GV80 90 aa10.05□□□□□ -0.8
SLC52A1-201ENST00000254853 Q75L30 129 aa10.04□□□□□ -0.8
SLC52A1-201ENST00000254853 CIRBP-AS1Q8TBR5 109 aa10.04□□□□□ -0.8
SLC52A1-201ENST00000254853 HRES1P13985 223 aa10.04□□□□□ -0.8
SLC52A1-201ENST00000254853 Q5W150 140 aa10.03□□□□□ -0.8
SLC52A1-201ENST00000254853 SPAG11AQ6PDA7 123 aa10.02□□□□□ -0.8
SLC52A1-201ENST00000254853 C1orf134Q5TEV5 83 aa10□□□□□ -0.81
SLC52A1-201ENST00000254853 PMAIP1Q13794 54 aa10□□□□□ -0.81
SLC52A1-201ENST00000254853 KRTAP13-3Q3SY46 172 aa9.99□□□□□ -0.81
SLC52A1-201ENST00000254853 LINC01558Q9Y6Z2 57 aa9.99□□□□□ -0.81
SLC52A1-201ENST00000254853 A6NED7 52 aa9.98□□□□□ -0.81
SLC52A1-201ENST00000254853 LCA10Q71F78 164 aa9.98□□□□□ -0.81
SLC52A1-201ENST00000254853 ALMS1Q8TCU4 4167 aa9.94□□□□□ -0.82
SLC52A1-201ENST00000254853 SSBP3-AS1Q7Z2R9 100 aa9.94□□□□□ -0.82
SLC52A1-201ENST00000254853 MEGF8Q7Z7M0 2845 aa9.93□□□□□ -0.82
SLC52A1-201ENST00000254853 TGP01266 2768 aa9.92□□□□□ -0.82
SLC52A1-201ENST00000254853 C8orf87E5RJ46 101 aa9.91□□□□□ -0.82
SLC52A1-201ENST00000254853 SPTSSBQ8NFR3 76 aa9.91□□□□□ -0.82
SLC52A1-201ENST00000254853 DNAH11Q96DT5 4516 aa9.9□□□□□ -0.82
SLC52A1-201ENST00000254853 LY6G6CO95867 125 aa9.89□□□□□ -0.83
SLC52A1-201ENST00000254853 PRR26Q8N8Z3 221 aa9.88□□□□□ -0.83
SLC52A1-201ENST00000254853 KRTAP10-2P60368 255 aa9.88□□□□□ -0.83
SLC52A1-201ENST00000254853 DNAH6Q9C0G6 4158 aa9.87□□□□□ -0.83
SLC52A1-201ENST00000254853 ATP11AUNQ6ZP68 121 aa9.87□□□□□ -0.83
SLC52A1-201ENST00000254853 CDC42SE1Q9NRR8 79 aa9.87□□□□□ -0.83
SLC52A1-201ENST00000254853 DNAH5Q8TE73 4624 aa9.87□□□□□ -0.83
SLC52A1-201ENST00000254853 LINC00313P59037 77 aa9.86□□□□□ -0.83
SLC52A1-201ENST00000254853 SPINK7P58062 85 aa9.85□□□□□ -0.83
SLC52A1-201ENST00000254853 KRTAP13-2Q52LG2 175 aa9.85□□□□□ -0.83
SLC52A1-201ENST00000254853 RETNLBQ9BQ08 111 aa9.85□□□□□ -0.83
SLC52A1-201ENST00000254853 ACYP2P14621 99 aa9.82□□□□□ -0.84
SLC52A1-201ENST00000254853 SEC61GP60059 68 aa9.81□□□□□ -0.84
SLC52A1-201ENST00000254853 FAM229AH3BQW9 127 aa9.8□□□□□ -0.84
SLC52A1-201ENST00000254853 DMAC1Q96GE9 116 aa9.79□□□□□ -0.84
SLC52A1-201ENST00000254853 A6NN06 94 aa9.77□□□□□ -0.85
SLC52A1-201ENST00000254853 LRP1BQ9NZR2 4599 aa9.75□□□□□ -0.85
SLC52A1-201ENST00000254853 IGKV2-30P06310 120 aa9.75□□□□□ -0.85
SLC52A1-201ENST00000254853 KRTAP10-1P60331 282 aa9.75□□□□□ -0.85
SLC52A1-201ENST00000254853 KRTAP16-1A8MUX0 517 aa9.74□□□□□ -0.85
SLC52A1-201ENST00000254853 KTN1-AS1Q86SY8 53 aa9.74□□□□□ -0.85
SLC52A1-201ENST00000254853 Q6ZSA8 131 aa9.73□□□□□ -0.85
SLC52A1-201ENST00000254853 KRTAP1-4P0C5Y4 121 aa9.7□□□□□ -0.86
SLC52A1-201ENST00000254853 PKD1P98161 4303 aa9.67□□□□□ -0.86
SLC52A1-201ENST00000254853 IGKV2D-30A0A075B6S6 120 aa9.64□□□□□ -0.87
SLC52A1-201ENST00000254853 FAT2Q9NYQ8 4349 aa9.62□□□□□ -0.87
SLC52A1-201ENST00000254853 A0A1B0GU69 56 aa9.6□□□□□ -0.87
SLC52A1-201ENST00000254853 PLA2G1BP04054 148 aaKnown RBP9.59□□□□□ -0.87
SLC52A1-201ENST00000254853 C4orf48Q5BLP8 95 aa9.59□□□□□ -0.87
SLC52A1-201ENST00000254853 VPS13BQ7Z7G8 4022 aa9.57□□□□□ -0.88
SLC52A1-201ENST00000254853 HYDINQ4G0P3 5121 aa9.57□□□□□ -0.88
SLC52A1-201ENST00000254853 C7orf65Q6ZTY9 151 aa9.57□□□□□ -0.88
SLC52A1-201ENST00000254853 TYMSOSQ8TAI1 123 aa9.57□□□□□ -0.88
SLC52A1-201ENST00000254853 RBM12B-AS1Q9P1G2 102 aa9.55□□□□□ -0.88
SLC52A1-201ENST00000254853 SPINK1P00995 79 aa9.52□□□□□ -0.88
SLC52A1-201ENST00000254853 SPATA8Q6RVD6 105 aa9.49□□□□□ -0.89
SLC52A1-201ENST00000254853 MIR22HGQ0VDD5 57 aa9.44□□□□□ -0.9
SLC52A1-201ENST00000254853 UQCR11O14957 56 aa9.43□□□□□ -0.9
SLC52A1-201ENST00000254853 LINC00304Q8N9R0 145 aa9.43□□□□□ -0.9
SLC52A1-201ENST00000254853 Q8N1X5 172 aa9.43□□□□□ -0.9
SLC52A1-201ENST00000254853 SACSQ9NZJ4 4579 aa9.38□□□□□ -0.91
SLC52A1-201ENST00000254853 RPS29P62273 56 aaKnown RBP9.37□□□□□ -0.91
SLC52A1-201ENST00000254853 PRAC1Q96KF2 57 aa9.36□□□□□ -0.91
SLC52A1-201ENST00000254853 ADM2Q7Z4H4 148 aa9.34□□□□□ -0.91
SLC52A1-201ENST00000254853 PKHD1P08F94 4074 aa9.33□□□□□ -0.92
SLC52A1-201ENST00000254853 SMR3BP02814 79 aaPredicted RBP9.32□□□□□ -0.92
SLC52A1-201ENST00000254853 C9orf92A6NGG3 77 aa9.31□□□□□ -0.92
SLC52A1-201ENST00000254853 DYNC1H1Q14204 4646 aaKnown RBP9.27□□□□□ -0.93
SLC52A1-201ENST00000254853 A8MUU9 505 aa9.26□□□□□ -0.93
SLC52A1-201ENST00000254853 C20orf166-AS1Q96NR2 134 aa9.26□□□□□ -0.93
SLC52A1-201ENST00000254853 KRTAP3-1Q9BYR8 98 aa9.21□□□□□ -0.93
SLC52A1-201ENST00000254853 PKHD1L1Q86WI1 4243 aa9.21□□□□□ -0.94
SLC52A1-201ENST00000254853 KMT2CQ8NEZ4 4911 aaKnown RBP9.21□□□□□ -0.94
SLC52A1-201ENST00000254853 FAT1Q14517 4588 aa9.21□□□□□ -0.94
SLC52A1-201ENST00000254853 KRTAP10-4P60372 401 aaPredicted RBP9.18□□□□□ -0.94
SLC52A1-201ENST00000254853 APOBP04114 4563 aaKnown RBP9.18□□□□□ -0.94
SLC52A1-201ENST00000254853 H0YAA0 97 aa9.13□□□□□ -0.95
SLC52A1-201ENST00000254853 A0A1B0GVY2 172 aa9.12□□□□□ -0.95
SLC52A1-201ENST00000254853 RYR3Q15413 4870 aa9.09□□□□□ -0.95
SLC52A1-201ENST00000254853 A0A1B0GU33 70 aa9.06□□□□□ -0.96
SLC52A1-201ENST00000254853 CSAG1Q6PB30 78 aa9.05□□□□□ -0.96
SLC52A1-201ENST00000254853 LINC01554Q52M75 96 aa9.04□□□□□ -0.96
SLC52A1-201ENST00000254853 H1FX-AS1Q4G0G2 97 aa9.03□□□□□ -0.96
SLC52A1-201ENST00000254853 COX6B2Q6YFQ2 88 aa9.01□□□□□ -0.97
SLC52A1-201ENST00000254853 FLG2Q5D862 2391 aaPredicted RBP8.97□□□□□ -0.97
SLC52A1-201ENST00000254853 RYR2Q92736 4967 aa8.95□□□□□ -0.98
SLC52A1-201ENST00000254853 FAT3Q8TDW7 4589 aa8.93□□□□□ -0.98
SLC52A1-201ENST00000254853 LRP1Q07954 4544 aaKnown RBP8.85□□□□□ -0.99
SLC52A1-201ENST00000254853 TNXBP22105 4242 aa8.85□□□□□ -0.99
SLC52A1-201ENST00000254853 KRTAP10-8P60410 259 aa8.83□□□□□ -1
SLC52A1-201ENST00000254853 KRTAP3-3Q9BYR6 98 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms