RNA–Protein interactions for RNA: ENST00000248444.9

VIL1-201, Transcript of villin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIL1, Length 6,531 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-201ENST00000248444 Q5XG85 94 aa5.58□□□□□ -1.52
VIL1-201ENST00000248444 A8MUU9 505 aa5.57□□□□□ -1.52
VIL1-201ENST00000248444 ROMO1P60602 79 aa5.57□□□□□ -1.52
VIL1-201ENST00000248444 PRAC1Q96KF2 57 aa5.56□□□□□ -1.52
VIL1-201ENST00000248444 FREM2Q5SZK8 3169 aa5.56□□□□□ -1.52
VIL1-201ENST00000248444 ADGRG4Q8IZF6 3080 aa5.55□□□□□ -1.52
VIL1-201ENST00000248444 STAB2Q8WWQ8 2551 aa5.54□□□□□ -1.52
VIL1-201ENST00000248444 CFAP47Q6ZTR5 3102 aa5.54□□□□□ -1.52
VIL1-201ENST00000248444 APCP25054 2843 aa5.53□□□□□ -1.52
VIL1-201ENST00000248444 DMXL1Q9Y485 3027 aa5.5□□□□□ -1.53
VIL1-201ENST00000248444 TENM4Q6N022 2769 aa5.5□□□□□ -1.53
VIL1-201ENST00000248444 NBEAQ8NFP9 2946 aa5.49□□□□□ -1.53
VIL1-201ENST00000248444 DMBT1Q9UGM3 2413 aaPredicted RBP5.49□□□□□ -1.53
VIL1-201ENST00000248444 FLG2Q5D862 2391 aaPredicted RBP5.48□□□□□ -1.53
VIL1-201ENST00000248444 SPEGQ15772 3267 aa5.48□□□□□ -1.53
VIL1-201ENST00000248444 KRTAP1-4P0C5Y4 121 aa5.46□□□□□ -1.54
VIL1-201ENST00000248444 XP32Q5T750 250 aa5.44□□□□□ -1.54
VIL1-201ENST00000248444 A8MU10 97 aa5.44□□□□□ -1.54
VIL1-201ENST00000248444 ZZEF1O43149 2961 aa5.43□□□□□ -1.54
VIL1-201ENST00000248444 A0A1B0GVY2 172 aa5.43□□□□□ -1.54
VIL1-201ENST00000248444 ASH1LQ9NR48 2969 aaKnown RBP5.37□□□□□ -1.55
VIL1-201ENST00000248444 TPRXLQ17RH7 258 aa5.36□□□□□ -1.55
VIL1-201ENST00000248444 CELSR2Q9HCU4 2923 aa5.34□□□□□ -1.55
VIL1-201ENST00000248444 MYO15AQ9UKN7 3530 aa5.33□□□□□ -1.56
VIL1-201ENST00000248444 HRNRQ86YZ3 2850 aaPredicted RBP5.32□□□□□ -1.56
VIL1-201ENST00000248444 LOC400499M0QZD8 3231 aa5.32□□□□□ -1.56
VIL1-201ENST00000248444 NIPBLQ6KC79 2804 aaeCLIP5.32□□□□□ -1.56
VIL1-201ENST00000248444 DCHS2Q6V1P9 2916 aa5.31□□□□□ -1.56
VIL1-201ENST00000248444 A0A0A0MQY5 61 aa5.3□□□□□ -1.56
VIL1-201ENST00000248444 TNP1P09430 55 aa5.3□□□□□ -1.56
VIL1-201ENST00000248444 ZANQ9Y493 2812 aa5.29□□□□□ -1.56
VIL1-201ENST00000248444 KRTAP10-10P60014 251 aa5.28□□□□□ -1.56
VIL1-201ENST00000248444 KRTAP10-8P60410 259 aa5.28□□□□□ -1.56
VIL1-201ENST00000248444 KRTAP13-3Q3SY46 172 aa5.26□□□□□ -1.57
VIL1-201ENST00000248444 TENM2Q9NT68 2774 aa5.24□□□□□ -1.57
VIL1-201ENST00000248444 ASPMQ8IZT6 3477 aa5.23□□□□□ -1.57
VIL1-201ENST00000248444 NBPF19A0A087WUL8 3843 aa5.22□□□□□ -1.57
VIL1-201ENST00000248444 NF1P21359 2839 aa5.22□□□□□ -1.57
VIL1-201ENST00000248444 RELNP78509 3460 aa5.22□□□□□ -1.57
VIL1-201ENST00000248444 KRTAP25-1Q3LHN0 102 aa5.2□□□□□ -1.58
VIL1-201ENST00000248444 KRTAP16-1A8MUX0 517 aa5.19□□□□□ -1.58
VIL1-201ENST00000248444 WDFY3Q8IZQ1 3526 aa5.18□□□□□ -1.58
VIL1-201ENST00000248444 FBN2P35556 2912 aa5.17□□□□□ -1.58
VIL1-201ENST00000248444 TENM1Q9UKZ4 2725 aa5.14□□□□□ -1.59
VIL1-201ENST00000248444 CELSR1Q9NYQ6 3014 aa5.14□□□□□ -1.59
VIL1-201ENST00000248444 A6NN06 94 aa5.13□□□□□ -1.59
VIL1-201ENST00000248444 C10orf95Q9H7T3 257 aa5.12□□□□□ -1.59
VIL1-201ENST00000248444 PRO2289Q9P1D8 64 aa5.12□□□□□ -1.59
VIL1-201ENST00000248444 LAMA5O15230 3695 aa5.1□□□□□ -1.59
VIL1-201ENST00000248444 PDZD2O15018 2839 aa5.09□□□□□ -1.59
VIL1-201ENST00000248444 MXRA5Q9NR99 2828 aa5.08□□□□□ -1.6
VIL1-201ENST00000248444 H3BS24 57 aa5.07□□□□□ -1.6
VIL1-201ENST00000248444 DCHS1Q96JQ0 3298 aa5.07□□□□□ -1.6
VIL1-201ENST00000248444 ZFHX4Q86UP3 3567 aa5.06□□□□□ -1.6
VIL1-201ENST00000248444 TENM3Q9P273 2699 aa5.06□□□□□ -1.6
VIL1-201ENST00000248444 ANK3Q12955 4377 aaKnown RBP5.05□□□□□ -1.6
VIL1-201ENST00000248444 DMDP11532 3685 aa5.04□□□□□ -1.6
VIL1-201ENST00000248444 P0C880 135 aa5.04□□□□□ -1.6
VIL1-201ENST00000248444 H0YAA0 97 aa5.02□□□□□ -1.61
VIL1-201ENST00000248444 PP632Q6XCG6 107 aa5.02□□□□□ -1.61
VIL1-201ENST00000248444 PKD1L1Q8TDX9 2849 aa4.98□□□□□ -1.61
VIL1-201ENST00000248444 ZFHX3Q15911 3703 aa4.96□□□□□ -1.62
VIL1-201ENST00000248444 OTOGQ6ZRI0 2925 aa4.95□□□□□ -1.62
VIL1-201ENST00000248444 NDUFAF8A1L188 74 aa4.94□□□□□ -1.62
VIL1-201ENST00000248444 VWFP04275 2813 aa4.9□□□□□ -1.63
VIL1-201ENST00000248444 CSMD1Q96PZ7 3565 aa4.89□□□□□ -1.63
VIL1-201ENST00000248444 FBN1P35555 2871 aaKnown RBP4.89□□□□□ -1.63
VIL1-201ENST00000248444 MUC3AQ02505 3323 aa4.87□□□□□ -1.63
VIL1-201ENST00000248444 SMG1Q96Q15 3661 aaKnown RBP4.86□□□□□ -1.63
VIL1-201ENST00000248444 TGP01266 2768 aa4.86□□□□□ -1.63
VIL1-201ENST00000248444 CSMD2Q7Z408 3487 aa4.82□□□□□ -1.64
VIL1-201ENST00000248444 KRTAP12-2P59991 146 aa4.81□□□□□ -1.64
VIL1-201ENST00000248444 KRTAP4-5Q9BYR2 181 aa4.8□□□□□ -1.64
VIL1-201ENST00000248444 MT1HL1P0DM35 61 aa4.8□□□□□ -1.64
VIL1-201ENST00000248444 SPENQ96T58 3664 aaKnown RBP4.78□□□□□ -1.64
VIL1-201ENST00000248444 HUWE1Q7Z6Z7 4374 aaKnown RBP4.77□□□□□ -1.65
VIL1-201ENST00000248444 KRTAP3-1Q9BYR8 98 aa4.76□□□□□ -1.65
VIL1-201ENST00000248444 SVEP1Q4LDE5 3571 aa4.76□□□□□ -1.65
VIL1-201ENST00000248444 BSNQ9UPA5 3926 aa4.75□□□□□ -1.65
VIL1-201ENST00000248444 TRRAPQ9Y4A5 3859 aa4.74□□□□□ -1.65
VIL1-201ENST00000248444 ALMS1Q8TCU4 4167 aa4.71□□□□□ -1.66
VIL1-201ENST00000248444 KRTAP13-4Q3LI77 160 aa4.71□□□□□ -1.66
VIL1-201ENST00000248444 KRTAP12-1P59990 96 aa4.7□□□□□ -1.66
VIL1-201ENST00000248444 KRTAP10-4P60372 401 aaPredicted RBP4.64□□□□□ -1.67
VIL1-201ENST00000248444 FBN3Q75N90 2809 aa4.59□□□□□ -1.67
VIL1-201ENST00000248444 KRTAP15-1Q3LI76 137 aa4.59□□□□□ -1.67
VIL1-201ENST00000248444 KRTAP10-6P60371 365 aaPredicted RBP4.56□□□□□ -1.68
VIL1-201ENST00000248444 CUBNO60494 3623 aa4.55□□□□□ -1.68
VIL1-201ENST00000248444 SRRM2Q9UQ35 2752 aaKnown RBP4.53□□□□□ -1.68
VIL1-201ENST00000248444 VPS13CQ709C8 3753 aa4.52□□□□□ -1.69
VIL1-201ENST00000248444 MEGF8Q7Z7M0 2845 aa4.51□□□□□ -1.69
VIL1-201ENST00000248444 DNAH9Q9NYC9 4486 aa4.51□□□□□ -1.69
VIL1-201ENST00000248444 AKAP9Q99996 3911 aa4.49□□□□□ -1.69
VIL1-201ENST00000248444 COL7A1Q02388 2944 aa4.47□□□□□ -1.69
VIL1-201ENST00000248444 CRCT1Q9UGL9 99 aa4.46□□□□□ -1.69
VIL1-201ENST00000248444 KRTAP3-3Q9BYR6 98 aa4.46□□□□□ -1.7
VIL1-201ENST00000248444 KRTAP10-12P60413 245 aa4.46□□□□□ -1.7
VIL1-201ENST00000248444 KRTAP3-2Q9BYR7 98 aa4.41□□□□□ -1.7
VIL1-201ENST00000248444 ZNF469Q96JG9 3925 aaPredicted RBP4.38□□□□□ -1.71
VIL1-201ENST00000248444 DNAH5Q8TE73 4624 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms