RNA–Protein interactions for RNA: ENST00000248444.9

VIL1-201, Transcript of villin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIL1, Length 6,531 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-201ENST00000248444 DCAF8L2P0C7V8 631 aa18.1■□□□□ 0.49
VIL1-201ENST00000248444 NISCHQ9Y2I1 1504 aa17.17■□□□□ 0.34
VIL1-201ENST00000248444 SUPT5HO00267 1087 aaKnown RBP16.8■□□□□ 0.28
VIL1-201ENST00000248444 SHROOM4Q9ULL8 1493 aa16.68■□□□□ 0.26
VIL1-201ENST00000248444 EHMT2Q96KQ7 1210 aa16.38■□□□□ 0.21
VIL1-201ENST00000248444 APLP2Q06481 763 aa15.95■□□□□ 0.14
VIL1-201ENST00000248444 FAM9AQ8IZU1 332 aaPredicted RBP15.93■□□□□ 0.14
VIL1-201ENST00000248444 RANGAP1P46060 587 aaPredicted RBP15.77■□□□□ 0.12
VIL1-201ENST00000248444 TTBK1Q5TCY1 1321 aaPredicted RBP15.74■□□□□ 0.11
VIL1-201ENST00000248444 ATP1B4Q9UN42 357 aaPredicted RBP15.65■□□□□ 0.1
VIL1-201ENST00000248444 TRIM41Q8WV44 630 aa15.56■□□□□ 0.08
VIL1-201ENST00000248444 UBTFP17480 764 aaKnown RBP15.44■□□□□ 0.06
VIL1-201ENST00000248444 PCGF6Q9BYE7 350 aa15.32■□□□□ 0.04
VIL1-201ENST00000248444 PELP1Q8IZL8 1130 aaKnown RBP15.22■□□□□ 0.03
VIL1-201ENST00000248444 ABCC9O60706 1549 aa15.21■□□□□ 0.03
VIL1-201ENST00000248444 MYT1LQ9UL68 1186 aa15.18■□□□□ 0.02
VIL1-201ENST00000248444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.17■□□□□ 0.02
VIL1-201ENST00000248444 HNRNPUL2Q1KMD3 747 aaKnown RBP15.17■□□□□ 0.02
VIL1-201ENST00000248444 PABPN1Q86U42 306 aaKnown RBP eCLIP15.14■□□□□ 0.013e-7■■□□□ 13
VIL1-201ENST00000248444 CCER1Q8TC90 406 aaPredicted RBP15.14■□□□□ 0.01
VIL1-201ENST00000248444 PPARGC1BQ86YN6 1023 aaKnown RBP15.07■□□□□ 0
VIL1-201ENST00000248444 ITGAEP38570 1179 aa14.95□□□□□ -0.02
VIL1-201ENST00000248444 CHIC1Q5VXU3 224 aa14.91□□□□□ -0.02
VIL1-201ENST00000248444 ZEB1P37275 1124 aaPredicted RBP14.9□□□□□ -0.02
VIL1-201ENST00000248444 POLR3GLQ9BT43 218 aa14.78□□□□□ -0.04
VIL1-201ENST00000248444 FBLN2P98095 1184 aa14.76□□□□□ -0.05
VIL1-201ENST00000248444 CENPBP07199 599 aaPredicted RBP14.75□□□□□ -0.05
VIL1-201ENST00000248444 LOC105371045A0A1W2PR82 267 aa14.74□□□□□ -0.05
VIL1-201ENST00000248444 YTHDC1Q96MU7 727 aaKnown RBP14.69□□□□□ -0.06
VIL1-201ENST00000248444 ERICH6Q7L0X2 663 aa14.65□□□□□ -0.06
VIL1-201ENST00000248444 TRIM26Q12899 539 aaPredicted RBP14.64□□□□□ -0.07
VIL1-201ENST00000248444 SLC4A1APQ9BWU0 796 aaKnown RBP14.64□□□□□ -0.07
VIL1-201ENST00000248444 CNGB1Q14028 1251 aaPredicted RBP14.62□□□□□ -0.07
VIL1-201ENST00000248444 NEFLP07196 543 aa14.62□□□□□ -0.07
VIL1-201ENST00000248444 FAM50AQ14320 339 aaKnown RBP14.59□□□□□ -0.07
VIL1-201ENST00000248444 TRIM52Q96A61 297 aa14.52□□□□□ -0.09
VIL1-201ENST00000248444 ARID3CA6NKF2 412 aa14.47□□□□□ -0.09
VIL1-201ENST00000248444 SCRIBQ14160 1630 aa14.43□□□□□ -0.1
VIL1-201ENST00000248444 P3H3Q8IVL6 736 aa14.42□□□□□ -0.1
VIL1-201ENST00000248444 BCANQ96GW7 911 aa14.35□□□□□ -0.11
VIL1-201ENST00000248444 NEUROD1Q13562 356 aa14.35□□□□□ -0.11
VIL1-201ENST00000248444 ZNF326Q5BKZ1 582 aaKnown RBP14.33□□□□□ -0.12
VIL1-201ENST00000248444 ZNF777Q9ULD5 760 aaPredicted RBP14.3□□□□□ -0.12
VIL1-201ENST00000248444 HRCP23327 699 aa14.28□□□□□ -0.12
VIL1-201ENST00000248444 PLPPR3Q6T4P5 718 aa14.25□□□□□ -0.13
VIL1-201ENST00000248444 NPM1P06748 294 aaKnown RBP eCLIP14.23□□□□□ -0.13
VIL1-201ENST00000248444 ESF1Q9H501 851 aaKnown RBP14.23□□□□□ -0.13
VIL1-201ENST00000248444 DAXXQ9UER7 740 aaPredicted RBP14.21□□□□□ -0.13
VIL1-201ENST00000248444 CSRNP3Q8WYN3 585 aa14.21□□□□□ -0.14
VIL1-201ENST00000248444 CDK11AQ9UQ88 783 aaPredicted RBP14.19□□□□□ -0.14
VIL1-201ENST00000248444 ZCCHC6Q5VYS8 1495 aaKnown RBP14.15□□□□□ -0.14
VIL1-201ENST00000248444 SLC24A1O60721 1099 aa14.14□□□□□ -0.15
VIL1-201ENST00000248444 CCDC180Q9P1Z9 1646 aa14.14□□□□□ -0.15
VIL1-201ENST00000248444 RB1CC1Q8TDY2 1594 aa14.11□□□□□ -0.15
VIL1-201ENST00000248444 STAG3Q9UJ98 1225 aa14.1□□□□□ -0.15
VIL1-201ENST00000248444 CHGAP10645 457 aaKnown RBP14.08□□□□□ -0.16
VIL1-201ENST00000248444 CHMP7Q8WUX9 453 aaPredicted RBP14.08□□□□□ -0.16
VIL1-201ENST00000248444 CLSPNQ9HAW4 1339 aa14.08□□□□□ -0.16
VIL1-201ENST00000248444 DIEXFQ68CQ4 756 aaKnown RBP14.03□□□□□ -0.16
VIL1-201ENST00000248444 ANP32CO43423 234 aa13.98□□□□□ -0.17
VIL1-201ENST00000248444 NEFMP07197 916 aa13.98□□□□□ -0.17
VIL1-201ENST00000248444 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.97□□□□□ -0.174e-9■□□□□ 10.8
VIL1-201ENST00000248444 BCL11AQ9H165 835 aa13.94□□□□□ -0.18
VIL1-201ENST00000248444 ZBTB47Q9UFB7 747 aaPredicted RBP13.93□□□□□ -0.18
VIL1-201ENST00000248444 CHIC2Q9UKJ5 165 aa13.92□□□□□ -0.18
VIL1-201ENST00000248444 CANXP27824 592 aaKnown RBP13.9□□□□□ -0.18
VIL1-201ENST00000248444 ZNF316A6NFI3 1004 aaPredicted RBP13.9□□□□□ -0.19
VIL1-201ENST00000248444 KCNH8Q96L42 1107 aa13.89□□□□□ -0.19
VIL1-201ENST00000248444 ERCC6Q03468 1493 aa13.89□□□□□ -0.19
VIL1-201ENST00000248444 NACADO15069 1562 aa13.87□□□□□ -0.19
VIL1-201ENST00000248444 TSPY4P0CV99 314 aa13.85□□□□□ -0.19
VIL1-201ENST00000248444 TSPY10P0CW01 314 aa13.85□□□□□ -0.19
VIL1-201ENST00000248444 BAZ1BQ9UIG0 1483 aaKnown RBP13.85□□□□□ -0.19
VIL1-201ENST00000248444 SENP3Q9H4L4 574 aaPredicted RBP13.82□□□□□ -0.2
VIL1-201ENST00000248444 SCAF1Q9H7N4 1312 aaKnown RBP13.82□□□□□ -0.2
VIL1-201ENST00000248444 MTUS2Q5JR59 1369 aa13.81□□□□□ -0.2
VIL1-201ENST00000248444 TONSLQ96HA7 1378 aa13.8□□□□□ -0.2
VIL1-201ENST00000248444 ARID4BQ4LE39 1312 aaPredicted RBP13.78□□□□□ -0.2
VIL1-201ENST00000248444 KDM2AQ9Y2K7 1162 aa13.75□□□□□ -0.21
VIL1-201ENST00000248444 PLEKHD1A6NEE1 506 aa13.75□□□□□ -0.21
VIL1-201ENST00000248444 PLEKHG5O94827 1062 aa13.73□□□□□ -0.21
VIL1-201ENST00000248444 PPP1R15AO75807 674 aaPredicted RBP13.72□□□□□ -0.21
VIL1-201ENST00000248444 RSF1Q96T23 1441 aaPredicted RBP13.7□□□□□ -0.22
VIL1-201ENST00000248444 A0A0G2JS52 829 aa13.69□□□□□ -0.22
VIL1-201ENST00000248444 C14orf37Q86TY3 774 aa13.69□□□□□ -0.22
VIL1-201ENST00000248444 MYT1Q01538 1121 aa13.69□□□□□ -0.22
VIL1-201ENST00000248444 ZBTB7CA1YPR0 619 aa13.69□□□□□ -0.22
VIL1-201ENST00000248444 TRHP20396 242 aaPredicted RBP13.68□□□□□ -0.22
VIL1-201ENST00000248444 RRP7BPQ9NSQ0 103 aa13.68□□□□□ -0.22
VIL1-201ENST00000248444 CLIP1P30622 1438 aa13.68□□□□□ -0.22
VIL1-201ENST00000248444 RTL5Q5HYW3 569 aaPredicted RBP13.66□□□□□ -0.22
VIL1-201ENST00000248444 WRNQ14191 1432 aaPredicted RBP eCLIP13.66□□□□□ -0.22
VIL1-201ENST00000248444 KIF27Q86VH2 1401 aa13.62□□□□□ -0.23
VIL1-201ENST00000248444 SALL2Q9Y467 1007 aaPredicted RBP13.61□□□□□ -0.23
VIL1-201ENST00000248444 CFDP1Q9UEE9 299 aaPredicted RBP13.6□□□□□ -0.23
VIL1-201ENST00000248444 GOLGA3Q08378 1498 aa13.59□□□□□ -0.23
VIL1-201ENST00000248444 FAM9BQ8IZU0 186 aa13.59□□□□□ -0.23
VIL1-201ENST00000248444 DCAF1Q9Y4B6 1507 aa13.58□□□□□ -0.23
VIL1-201ENST00000248444 DDX10Q13206 875 aaKnown RBP13.58□□□□□ -0.24
VIL1-201ENST00000248444 BAZ1AQ9NRL2 1556 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms