RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 A0A1B0GVX0 72 aa12.9□□□□□ -0.35
SH2D3A-201ENST00000245908 TP53AIP1Q9HCN2 124 aa12.9□□□□□ -0.35
SH2D3A-201ENST00000245908 LCA10Q71F78 164 aa12.89□□□□□ -0.35
SH2D3A-201ENST00000245908 COA5Q86WW8 74 aa12.87□□□□□ -0.35
SH2D3A-201ENST00000245908 FBN3Q75N90 2809 aa12.87□□□□□ -0.35
SH2D3A-201ENST00000245908 IGLV7-46A0A075B6I9 117 aa12.86□□□□□ -0.35
SH2D3A-201ENST00000245908 FRAS1Q86XX4 4008 aa12.86□□□□□ -0.35
SH2D3A-201ENST00000245908 IGHV6-1A0A0B4J1U7 121 aa12.86□□□□□ -0.35
SH2D3A-201ENST00000245908 SPTSSBQ8NFR3 76 aa12.85□□□□□ -0.35
SH2D3A-201ENST00000245908 A6NED7 52 aa12.85□□□□□ -0.35
SH2D3A-201ENST00000245908 NDUFS5O43920 106 aa12.85□□□□□ -0.35
SH2D3A-201ENST00000245908 IGLV7-43P04211 117 aa12.85□□□□□ -0.35
SH2D3A-201ENST00000245908 CDK2AP2O75956 126 aa12.84□□□□□ -0.35
SH2D3A-201ENST00000245908 MEGF8Q7Z7M0 2845 aa12.83□□□□□ -0.35
SH2D3A-201ENST00000245908 A6NN06 94 aa12.82□□□□□ -0.36
SH2D3A-201ENST00000245908 CDC42SE1Q9NRR8 79 aa12.81□□□□□ -0.36
SH2D3A-201ENST00000245908 RBM12B-AS1Q9P1G2 102 aa12.81□□□□□ -0.36
SH2D3A-201ENST00000245908 MRPL34Q9BQ48 92 aaKnown RBP12.79□□□□□ -0.36
SH2D3A-201ENST00000245908 LY6G6CO95867 125 aa12.76□□□□□ -0.37
SH2D3A-201ENST00000245908 LINC01558Q9Y6Z2 57 aa12.76□□□□□ -0.37
SH2D3A-201ENST00000245908 A0A087X002 238 aa12.74□□□□□ -0.37
SH2D3A-201ENST00000245908 NOTCH2NLQ7Z3S9 236 aa12.74□□□□□ -0.37
SH2D3A-201ENST00000245908 TGP01266 2768 aa12.73□□□□□ -0.37
SH2D3A-201ENST00000245908 DNAH6Q9C0G6 4158 aa12.72□□□□□ -0.37
SH2D3A-201ENST00000245908 PCOTHQ58A44 107 aa12.72□□□□□ -0.37
SH2D3A-201ENST00000245908 CIRBP-AS1Q8TBR5 109 aa12.7□□□□□ -0.38
SH2D3A-201ENST00000245908 SSBP3-AS1Q7Z2R9 100 aa12.69□□□□□ -0.38
SH2D3A-201ENST00000245908 KRTAP10-2P60368 255 aa12.68□□□□□ -0.38
SH2D3A-201ENST00000245908 SPINK6Q6UWN8 80 aa12.68□□□□□ -0.38
SH2D3A-201ENST00000245908 ALMS1Q8TCU4 4167 aa12.67□□□□□ -0.38
SH2D3A-201ENST00000245908 C7orf65Q6ZTY9 151 aa12.67□□□□□ -0.38
SH2D3A-201ENST00000245908 DNAH5Q8TE73 4624 aa12.66□□□□□ -0.38
SH2D3A-201ENST00000245908 DNAH11Q96DT5 4516 aa12.64□□□□□ -0.39
SH2D3A-201ENST00000245908 SPAG11AQ6PDA7 123 aa12.64□□□□□ -0.39
SH2D3A-201ENST00000245908 DNHD1Q96M86 4753 aa12.62□□□□□ -0.39
SH2D3A-201ENST00000245908 C8orf87E5RJ46 101 aa12.58□□□□□ -0.4
SH2D3A-201ENST00000245908 KRTAP13-3Q3SY46 172 aa12.58□□□□□ -0.4
SH2D3A-201ENST00000245908 Q6ZSA8 131 aa12.58□□□□□ -0.4
SH2D3A-201ENST00000245908 HRES1P13985 223 aa12.55□□□□□ -0.4
SH2D3A-201ENST00000245908 Q5W150 140 aa12.55□□□□□ -0.4
SH2D3A-201ENST00000245908 SPINK7P58062 85 aa12.55□□□□□ -0.4
SH2D3A-201ENST00000245908 KRTAP13-2Q52LG2 175 aa12.53□□□□□ -0.4
SH2D3A-201ENST00000245908 KRTAP10-1P60331 282 aa12.53□□□□□ -0.4
SH2D3A-201ENST00000245908 PKD1P98161 4303 aa12.48□□□□□ -0.41
SH2D3A-201ENST00000245908 LINC00313P59037 77 aa12.46□□□□□ -0.42
SH2D3A-201ENST00000245908 LRP1BQ9NZR2 4599 aa12.42□□□□□ -0.42
SH2D3A-201ENST00000245908 KRTAP1-4P0C5Y4 121 aa12.41□□□□□ -0.42
SH2D3A-201ENST00000245908 FAT2Q9NYQ8 4349 aa12.4□□□□□ -0.42
SH2D3A-201ENST00000245908 FAM229AH3BQW9 127 aa12.37□□□□□ -0.43
SH2D3A-201ENST00000245908 HYDINQ4G0P3 5121 aa12.35□□□□□ -0.43
SH2D3A-201ENST00000245908 KRTAP16-1A8MUX0 517 aa12.33□□□□□ -0.44
SH2D3A-201ENST00000245908 PRR26Q8N8Z3 221 aa12.32□□□□□ -0.44
SH2D3A-201ENST00000245908 ACYP2P14621 99 aa12.28□□□□□ -0.44
SH2D3A-201ENST00000245908 IGKV2-30P06310 120 aa12.28□□□□□ -0.44
SH2D3A-201ENST00000245908 VPS13BQ7Z7G8 4022 aa12.27□□□□□ -0.44
SH2D3A-201ENST00000245908 DMAC1Q96GE9 116 aa12.27□□□□□ -0.45
SH2D3A-201ENST00000245908 RETNLBQ9BQ08 111 aa12.27□□□□□ -0.45
SH2D3A-201ENST00000245908 PLA2G1BP04054 148 aaKnown RBP12.25□□□□□ -0.45
SH2D3A-201ENST00000245908 C4orf48Q5BLP8 95 aa12.22□□□□□ -0.45
SH2D3A-201ENST00000245908 TYMSOSQ8TAI1 123 aa12.22□□□□□ -0.45
SH2D3A-201ENST00000245908 SPINK1P00995 79 aa12.2□□□□□ -0.46
SH2D3A-201ENST00000245908 PRAC1Q96KF2 57 aa12.19□□□□□ -0.46
SH2D3A-201ENST00000245908 SPATA8Q6RVD6 105 aa12.14□□□□□ -0.47
SH2D3A-201ENST00000245908 A0A1B0GU69 56 aa12.11□□□□□ -0.47
SH2D3A-201ENST00000245908 ADM2Q7Z4H4 148 aa12.1□□□□□ -0.47
SH2D3A-201ENST00000245908 KRTAP21-3Q3LHN1 58 aa12.08□□□□□ -0.48
SH2D3A-201ENST00000245908 LINC01554Q52M75 96 aa12.08□□□□□ -0.48
SH2D3A-201ENST00000245908 IGKV2D-30A0A075B6S6 120 aa12.08□□□□□ -0.48
SH2D3A-201ENST00000245908 RPS29P62273 56 aaKnown RBP12.08□□□□□ -0.48
SH2D3A-201ENST00000245908 LINC00304Q8N9R0 145 aa12.07□□□□□ -0.48
SH2D3A-201ENST00000245908 SACSQ9NZJ4 4579 aa12.05□□□□□ -0.48
SH2D3A-201ENST00000245908 PKHD1P08F94 4074 aa12.02□□□□□ -0.49
SH2D3A-201ENST00000245908 MIR22HGQ0VDD5 57 aa12□□□□□ -0.49
SH2D3A-201ENST00000245908 UQCR11O14957 56 aa12□□□□□ -0.49
SH2D3A-201ENST00000245908 DYNC1H1Q14204 4646 aaKnown RBP11.94□□□□□ -0.5
SH2D3A-201ENST00000245908 SMR3BP02814 79 aaPredicted RBP11.93□□□□□ -0.5
SH2D3A-201ENST00000245908 A0A1B0GVY2 172 aa11.89□□□□□ -0.51
SH2D3A-201ENST00000245908 KRTAP10-4P60372 401 aaPredicted RBP11.87□□□□□ -0.51
SH2D3A-201ENST00000245908 PKHD1L1Q86WI1 4243 aa11.83□□□□□ -0.52
SH2D3A-201ENST00000245908 APOBP04114 4563 aaKnown RBP11.82□□□□□ -0.52
SH2D3A-201ENST00000245908 C20orf166-AS1Q96NR2 134 aa11.8□□□□□ -0.52
SH2D3A-201ENST00000245908 A8MUU9 505 aa11.8□□□□□ -0.52
SH2D3A-201ENST00000245908 CSAG1Q6PB30 78 aa11.79□□□□□ -0.52
SH2D3A-201ENST00000245908 Q8N1X5 172 aa11.78□□□□□ -0.52
SH2D3A-201ENST00000245908 C9orf92A6NGG3 77 aa11.76□□□□□ -0.53
SH2D3A-201ENST00000245908 FAT1Q14517 4588 aa11.74□□□□□ -0.53
SH2D3A-201ENST00000245908 H3BS24 57 aa11.72□□□□□ -0.53
SH2D3A-201ENST00000245908 RYR2Q92736 4967 aa11.61□□□□□ -0.55
SH2D3A-201ENST00000245908 KRTAP3-1Q9BYR8 98 aa11.58□□□□□ -0.56
SH2D3A-201ENST00000245908 FLG2Q5D862 2391 aaPredicted RBP11.51□□□□□ -0.57
SH2D3A-201ENST00000245908 KRTAP25-1Q3LHN0 102 aa11.46□□□□□ -0.58
SH2D3A-201ENST00000245908 H0YAA0 97 aa11.44□□□□□ -0.58
SH2D3A-201ENST00000245908 FAT3Q8TDW7 4589 aa11.41□□□□□ -0.58
SH2D3A-201ENST00000245908 KRTAP10-8P60410 259 aa11.41□□□□□ -0.58
SH2D3A-201ENST00000245908 COX6B2Q6YFQ2 88 aa11.4□□□□□ -0.58
SH2D3A-201ENST00000245908 KMT2CQ8NEZ4 4911 aaKnown RBP11.4□□□□□ -0.58
SH2D3A-201ENST00000245908 TNXBP22105 4242 aa11.38□□□□□ -0.59
SH2D3A-201ENST00000245908 ROMO1P60602 79 aa11.33□□□□□ -0.6
SH2D3A-201ENST00000245908 Q5VSD8 79 aa11.33□□□□□ -0.6
SH2D3A-201ENST00000245908 LRP1Q07954 4544 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms